NMR Restraints Grid |
Result table
image | mrblock_id | pdb_id | bmrb_id | cing | stage | program | type | subtype | subsubtype |
586395 | 2mnw | 19910 | cing | 4-filtered-FRED | Wattos | check | completeness | distance |
data_2mnw save_NOE_Completeness _NOE_completeness_stats.Sf_category NOE_completeness_statistics _NOE_completeness_stats.Model_count 20 _NOE_completeness_stats.Residue_count 133 _NOE_completeness_stats.Total_atom_count 1520 _NOE_completeness_stats.Observable_atom_definition ob_standard _NOE_completeness_stats.Observable_atom_count 526 _NOE_completeness_stats.Use_intra_residue_restraints no _NOE_completeness_stats.Redundancy_threshold_pct 5.0 _NOE_completeness_stats.Distance_averaging_power 1.00 _NOE_completeness_stats.Completeness_cutoff 4.00 _NOE_completeness_stats.Completeness_cumulative_pct 72.1 _NOE_completeness_stats.Constraint_unexpanded_count 2360 _NOE_completeness_stats.Constraint_count 2360 _NOE_completeness_stats.Constraint_exp_unfiltered_count 1318 _NOE_completeness_stats.Constraint_exceptional_count 0 _NOE_completeness_stats.Constraint_nonobservable_count 60 _NOE_completeness_stats.Constraint_intraresidue_count 123 _NOE_completeness_stats.Constraint_surplus_count 0 _NOE_completeness_stats.Constraint_observed_count 2177 _NOE_completeness_stats.Constraint_expected_count 1318 _NOE_completeness_stats.Constraint_matched_count 950 _NOE_completeness_stats.Constraint_unmatched_count 1227 _NOE_completeness_stats.Constraint_exp_nonobs_count 368 _NOE_completeness_stats.Details ; A detailed methodology description is available at: http://nmr.cmbi.ru.nl/~jd/wattos/doc/Wattos/Soup/Constraint/dc_completeness.html Please note that the contributions in ambiguous restraints are considered separate 'restraints' for the sets defined below. The cut off for all statistics except those in the by-shell table is given below by the above tag: _NOE_completeness_stats.Completeness_cutoff Description of the tags in this list: * 1 * Administrative tag * 2 * Administrative tag * 3 * Administrative tag * 4 * Number of models * 5 * Number of residues * 6 * Number of atoms * 7 * Standard set name of observable atom definitions see: Doreleijers et al., J.Biomol.NMR 14, 123-132 (1999). * 8 * Observable atom(group)s * 9 * Include intra residue restraints * 10 * Surplus threshold for determining redundant restraints * 11 * Power for averaging the distance over models * 12 * Up to what distance are NOEs expected * 13 * Cumulative completeness percentage * 14 * Number of unexpanded restraints in restraint list. * 15 * Number of restraints in restraint list. Set U * 16 * Expected restraints based on criteria in list. Set V Set V differs from set B only if intra residue restraints are analyzed. * 17 * Exceptional restraints, i.e. with an unknown atom.Set E * 18 * Not observable NOEs with e.g. hydroxyl Ser HG. Set O Even though restraints with these atom types might have been observed they are excluded from the analysis. * 19 * Intra-residue restraints if not to be analyzed. Set I * 20 * Surplus like double restraints. Set S * 21 * Observed restraints. Set A = U - (E u O u I u S) * 22 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 23 * Observed restraints matched to the expected. Set M = A n B * 24 * Observed restraints that were not expected. Set C = A - M * 25 * Expected restraints that were not observed. Set D = B - M * 26 * This tag Description of the tags in the class table: * 1 * Class of restraint. Note that 'medium-range' involves (2<=i<=4) contacts. Possible values are: intraresidue,sequential,medium-range,long-range, and intermolecular. * 2 * Observed restraints. Set A = U - (E u O u I u S) * 3 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 4 * Observed restraints matched to the expected. Set M = A n B * 5 * Completeness percentage * 6 * Standard deviation from the average over the classes. * 7 * Extra information * 8 * Administrative tag * 9 * Administrative tag Description of the tags in the shell table. The first row shows the lower limit of the shells requested and The last row shows the total number of restraints over the shells. * 1 * Description of the content of the row: edges, shell, or sums. The value determines the meaning of the values to the nine 'Matched_shell_x' tags among others. * 2 * Lower limit of shell of expected restraints. * 3 * Upper limit of shell of expected restraints. * 4 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 5 * Observed restraints matched to the expected. Set M = A n B * 6 * Matched restraints with experimental distance in shell 1 * 7 * Matched restraints with experimental distance in shell 2 * 8 * Matched restraints with experimental distance in shell 3 * 9 * Matched restraints with experimental distance in shell 4 * 10 * Matched restraints with experimental distance in shell 5 * 11 * Matched restraints with experimental distance in shell 6 * 12 * Matched restraints with experimental distance in shell 7 * 13 * Matched restraints with experimental distance in shell 8 * 14 * Matched restraints with experimental distance in shell 9 * 15 * Matched restraints overflowing the last shell * 16 * Completeness percentage for this shell * 17 * Completeness percentage up to upper limit of this shell * 18 * Administrative tag * 19 * Administrative tag Description of the tags in the residue table: * 1 * Chain identifier * 2 * Residue number * 3 * Residue name * 4 * Observable atom(group)s for this residue. * 5 * Observed restraints. Set A = U - (E u O u I u S) * 6 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 7 * Observed restraints matched to the expected. Set M = A n B * 8 * Completeness percentage * 9 * Standard deviation from the average over the residues. * 10 * Extra information * 11 * Administrative tag * 12 * Administrative tag ; loop_ _NOE_completeness_class.Type _NOE_completeness_class.Constraint_observed_count _NOE_completeness_class.Constraint_expected_count _NOE_completeness_class.Constraint_matched_count _NOE_completeness_class.Completeness_cumulative_pct _NOE_completeness_class.Std_dev _NOE_completeness_class.Details intraresidue 0 0 0 . . "no intras" sequential 842 373 311 83.4 1.0 >sigma medium-range 329 202 136 67.3 -0.5 . long-range 1006 743 503 67.7 -0.5 . intermolecular 0 0 0 . . "no multimer" stop_ loop_ _NOE_completeness_shell.Type _NOE_completeness_shell.Shell_start _NOE_completeness_shell.Shell_end _NOE_completeness_shell.Constraint_expected_count _NOE_completeness_shell.Constraint_matched_count _NOE_completeness_shell.Matched_shell_1 _NOE_completeness_shell.Matched_shell_2 _NOE_completeness_shell.Matched_shell_3 _NOE_completeness_shell.Matched_shell_4 _NOE_completeness_shell.Matched_shell_5 _NOE_completeness_shell.Matched_shell_6 _NOE_completeness_shell.Matched_shell_7 _NOE_completeness_shell.Matched_shell_8 _NOE_completeness_shell.Matched_shell_9 _NOE_completeness_shell.Matched_shell_overflow _NOE_completeness_shell.Completeness_shell_pct _NOE_completeness_shell.Completeness_cumulative_pct edges . . . . 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 . . . . shell 0.00 2.00 18 14 0 0 0 0 0 3 0 6 . 5 77.8 77.8 shell 2.00 2.50 143 134 0 0 0 0 0 36 0 65 . 33 93.7 91.9 shell 2.50 3.00 224 177 0 0 0 0 0 67 0 78 . 32 79.0 84.4 shell 3.00 3.50 380 283 0 0 0 0 0 90 0 131 . 62 74.5 79.5 shell 3.50 4.00 553 342 0 0 0 0 0 54 0 193 . 95 61.8 72.1 shell 4.00 4.50 926 515 0 0 0 0 0 42 0 298 . 175 55.6 65.3 shell 4.50 5.00 1181 402 0 0 0 0 0 6 0 133 . 263 34.0 54.5 shell 5.00 5.50 1418 217 0 0 0 0 0 0 0 63 . 154 15.3 43.0 shell 5.50 6.00 1610 87 0 0 0 0 0 0 0 5 . 82 5.4 33.6 shell 6.00 6.50 1828 6 0 0 0 0 0 0 0 1 . 5 0.3 26.3 shell 6.50 7.00 2034 0 0 0 0 0 0 0 0 0 . 0 0.0 21.1 shell 7.00 7.50 2244 0 0 0 0 0 0 0 0 0 . 0 0.0 17.3 shell 7.50 8.00 2382 0 0 0 0 0 0 0 0 0 . 0 0.0 14.6 shell 8.00 8.50 2535 0 0 0 0 0 0 0 0 0 . 0 0.0 12.5 shell 8.50 9.00 2700 0 0 0 0 0 0 0 0 0 . 0 0.0 10.8 sums . . 20176 2177 0 0 0 0 0 298 0 973 . 906 . . stop_ loop_ _NOE_completeness_comp.Entity_assembly_ID _NOE_completeness_comp.Comp_index_ID _NOE_completeness_comp.Comp_ID _NOE_completeness_comp.Obs_atom_count _NOE_completeness_comp.Constraint_observed_count _NOE_completeness_comp.Constraint_expected_count _NOE_completeness_comp.Constraint_matched_count _NOE_completeness_comp.Completeness_cumulative_pct _NOE_completeness_comp.Std_dev _NOE_completeness_comp.Details 1 38 MET 6 7 4 2 50.0 -1.6 >sigma 1 39 LEU 7 17 7 5 71.4 -0.2 . 1 40 THR 4 21 8 8 100.0 1.7 >sigma 1 41 PRO 5 22 24 11 45.8 -1.8 >sigma 1 42 ALA 3 21 11 10 90.9 1.1 >sigma 1 43 PHE 7 62 44 33 75.0 0.1 . 1 44 ASP 4 35 14 14 100.0 1.7 >sigma 1 45 LEU 7 86 49 39 79.6 0.4 . 1 46 SER 4 32 10 9 90.0 1.1 >sigma 1 47 GLN 7 47 42 26 61.9 -0.8 . 1 48 ASP 4 28 21 14 66.7 -0.5 . 1 49 PRO 5 24 12 9 75.0 0.1 . 1 50 ASP 4 33 21 16 76.2 0.2 . 1 51 PHE 7 71 40 28 70.0 -0.3 . 1 52 LEU 7 116 76 61 80.3 0.4 . 1 53 THR 4 66 34 29 85.3 0.7 . 1 54 ILE 6 108 62 51 82.3 0.5 . 1 55 ALA 3 49 25 24 96.0 1.4 >sigma 1 56 ILE 6 101 56 50 89.3 1.0 >sigma 1 57 ARG 7 47 27 17 63.0 -0.7 . 1 58 VAL 5 65 40 31 77.5 0.2 . 1 59 SER 4 25 14 12 85.7 0.8 . 1 60 TYR 6 27 13 11 84.6 0.7 . 1 61 ALA 3 36 23 21 91.3 1.1 >sigma 1 62 ARG 7 34 29 17 58.6 -1.0 . 1 63 VAL 5 51 36 31 86.1 0.8 . 1 64 SER 4 19 8 7 87.5 0.9 . 1 65 GLU 5 23 12 9 75.0 0.1 . 1 66 PHE 7 56 40 22 55.0 -1.2 >sigma 1 67 ASP 4 35 21 16 76.2 0.2 . 1 68 VAL 5 71 34 26 76.5 0.2 . 1 69 TYR 6 53 24 18 75.0 0.1 . 1 70 PHE 7 61 37 22 59.5 -0.9 . 1 71 GLU 5 29 11 8 72.7 -0.1 . 1 72 GLY 3 30 9 9 100.0 1.7 >sigma 1 73 SER 4 44 22 20 90.9 1.1 >sigma 1 74 ASP 4 35 16 13 81.3 0.5 . 1 75 PHE 7 102 64 47 73.4 -0.0 . 1 76 LYS 7 57 30 18 60.0 -0.9 . 1 77 PHE 7 106 60 45 75.0 0.1 . 1 78 TYR 6 60 30 21 70.0 -0.3 . 1 79 ALA 3 47 31 26 83.9 0.7 . 1 80 LYS 7 37 42 24 57.1 -1.1 >sigma 1 81 PRO 5 16 24 6 25.0 -3.2 >sigma 1 82 TYR 6 60 31 24 77.4 0.2 . 1 83 PHE 7 33 12 11 91.7 1.2 >sigma 1 84 LEU 7 85 49 40 81.6 0.5 . 1 85 ARG 7 47 17 13 76.5 0.2 . 1 86 LEU 7 77 44 36 81.8 0.5 . 1 87 THR 4 31 11 10 90.9 1.1 >sigma 1 88 LEU 7 92 66 46 69.7 -0.3 . 1 89 PRO 5 27 34 12 35.3 -2.5 >sigma 1 90 GLY 3 27 18 13 72.2 -0.1 . 1 91 ARG 7 43 21 14 66.7 -0.5 . 1 92 ILE 6 107 67 52 77.6 0.2 . 1 93 VAL 5 58 36 29 80.6 0.4 . 1 94 GLU 5 26 17 12 70.6 -0.2 . 1 95 ASN 6 26 16 13 81.3 0.5 . 1 96 GLY 3 14 12 7 58.3 -1.0 >sigma 1 97 SER 4 20 11 11 100.0 1.7 >sigma 1 98 GLU 5 28 26 13 50.0 -1.6 >sigma 1 99 GLN 7 35 24 16 66.7 -0.5 . 1 100 GLY 3 30 17 15 88.2 0.9 . 1 101 SER 4 25 9 8 88.9 1.0 . 1 102 TYR 6 43 28 19 67.9 -0.4 . 1 103 ASP 4 42 20 15 75.0 0.1 . 1 104 ALA 3 19 11 9 81.8 0.5 . 1 105 ASP 4 18 10 9 90.0 1.1 >sigma 1 106 LYS 7 31 32 14 43.8 -2.0 >sigma 1 107 GLY 3 22 14 8 57.1 -1.1 >sigma 1 108 ILE 6 65 42 19 45.2 -1.9 >sigma 1 109 PHE 7 92 57 43 75.4 0.1 . 1 110 THR 4 53 20 18 90.0 1.1 >sigma 1 111 ILE 6 96 62 47 75.8 0.1 . 1 112 ARG 7 69 36 28 77.8 0.3 . 1 113 LEU 7 117 64 54 84.4 0.7 . 1 114 PRO 5 41 29 17 58.6 -1.0 . 1 115 LYS 7 57 63 24 38.1 -2.3 >sigma 1 116 GLU 5 52 26 22 84.6 0.7 . 1 117 THR 4 38 16 11 68.8 -0.3 . 1 118 PRO 5 15 11 6 54.5 -1.3 >sigma 1 119 GLY 3 27 10 10 100.0 1.7 >sigma 1 120 GLN 7 46 27 16 59.3 -1.0 . 1 121 HIS 6 25 12 8 66.7 -0.5 . 1 122 PHE 7 83 78 47 60.3 -0.9 . 1 123 GLU 5 20 11 7 63.6 -0.7 . 1 124 GLY 3 17 16 9 56.3 -1.2 >sigma 1 125 LEU 7 82 59 47 79.7 0.4 . 1 126 ASN 6 24 10 8 80.0 0.4 . 1 127 MET 6 29 17 12 70.6 -0.2 . 1 128 LEU 7 36 23 14 60.9 -0.9 . 1 129 THR 4 16 10 7 70.0 -0.3 . 1 130 ALA 3 16 7 5 71.4 -0.2 . 1 131 LEU 7 24 8 6 75.0 0.1 . 1 132 LEU 7 26 9 7 77.8 0.3 . 1 133 ALA 3 10 3 3 100.0 1.7 >sigma stop_ save_
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