NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
581035 4uzm 25210 cing 4-filtered-FRED Wattos check stereo assignment distance


data_4uzm


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        58
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.086
    _Stereo_assign_list.Total_e_high_states  83.592
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1   3 PHE QB 30 no 100.0 100.0 0.208 0.208 0.000 18  4 no 0.000 0 0 
       1   7 GLN QE 58 no  30.0 100.0 0.027 0.027 0.000  6  0 no 0.000 0 0 
       1  11 LEU QB 19 no 100.0  99.8 0.271 0.271 0.001 21  7 no 0.039 0 0 
       1  11 LEU QD 11 no 100.0 100.0 3.867 3.868 0.001 26  5 no 0.048 0 0 
       1  13 PRO QD 51 no 100.0 100.0 0.480 0.480 0.000 10  0 no 0.009 0 0 
       1  21 ASN QD 49 no  35.0  99.8 0.288 0.289 0.000 11  0 no 0.052 0 0 
       1  22 TYR QB 14 no 100.0 100.0 0.319 0.319 0.000 23  6 no 0.000 0 0 
       1  23 LEU QB 43 no 100.0 100.0 1.598 1.598 0.000 14  0 no 0.012 0 0 
       1  26 LEU QB 29 no 100.0 100.0 0.002 0.002 0.000 18  4 no 0.067 0 0 
       1  26 LEU QD 10 no 100.0 100.0 4.893 4.893 0.000 26  5 no 0.024 0 0 
       1  28 GLN QE 55 no 100.0 100.0 0.000 0.000 0.000  7  0 no 0.013 0 0 
       1  30 LEU QD 48 no  55.0 100.0 1.017 1.017 0.000 11  0 no 0.001 0 0 
       1  31 GLN QE 57 no  70.0 100.0 0.507 0.507 0.000  6  0 no 0.000 0 0 
       1  45 LEU QD  6 no  65.0  99.3 0.158 0.159 0.001 36  6 no 0.073 0 0 
       1  48 ASN QB 28 no 100.0  98.9 0.051 0.051 0.001 18  4 no 0.044 0 0 
       1  48 ASN QD 21 no 100.0 100.0 2.844 2.844 0.000 20  4 no 0.021 0 0 
       1  52 ASN QB 24 no 100.0  99.9 0.685 0.686 0.000 20  8 no 0.039 0 0 
       1  52 ASN QD 53 no 100.0  99.9 3.445 3.448 0.003  9  4 no 0.063 0 0 
       1  53 ASN QB 35 no 100.0  99.9 1.234 1.235 0.001 17  4 no 0.053 0 0 
       1  53 ASN QD 46 no 100.0 100.0 0.000 0.000 0.000 12  4 no 0.035 0 0 
       1  55 MET QB 34 no 100.0  99.9 0.958 0.959 0.001 17  2 no 0.044 0 0 
       1  56 MET QB 41 no 100.0 100.0 2.291 2.292 0.000 15  0 no 0.026 0 0 
       1  57 LEU QD  1 no 100.0 100.0 7.408 7.410 0.002 54 10 no 0.050 0 0 
       1  59 HIS QB 23 no 100.0  99.7 2.612 2.619 0.007 20  7 no 0.083 0 0 
       1  64 TYR QB 25 no 100.0 100.0 1.230 1.231 0.000 19  1 no 0.027 0 0 
       1  72 ASN QD 56 no  15.0  80.8 0.002 0.003 0.001  6  0 no 0.079 0 0 
       1  74 TRP QB 38 no 100.0  99.5 0.175 0.176 0.001 16  0 no 0.096 0 0 
       1  75 ARG QB 39 no 100.0  99.9 0.586 0.587 0.000 16  1 no 0.054 0 0 
       1  76 TYR QB 18 no 100.0 100.0 0.027 0.027 0.000 21  5 no 0.000 0 0 
       1  77 TYR QB 15 no 100.0 100.0 4.121 4.122 0.001 22  0 no 0.035 0 0 
       1  78 LEU QB 36 no 100.0 100.0 0.403 0.403 0.000 17  5 no 0.000 0 0 
       1  78 LEU QD  4 no 100.0  99.9 1.006 1.007 0.001 44 12 no 0.059 0 0 
       1  84 HIS QB 20 no 100.0  99.3 0.533 0.536 0.004 21  8 no 0.079 0 0 
       1  85 LEU QB 37 no 100.0 100.0 0.000 0.000 0.000 17  6 no 0.007 0 0 
       1  85 LEU QD  3 no 100.0  99.9 6.327 6.335 0.008 46 12 no 0.113 0 0 
       1  86 PRO QB 12 no 100.0  99.8 3.824 3.832 0.008 26 11 no 0.095 0 0 
       1  87 PRO QB 54 no 100.0  84.3 0.003 0.003 0.000  8  1 no 0.056 0 0 
       1  87 PRO QD 17 no 100.0  99.9 1.543 1.545 0.002 21  5 no 0.064 0 0 
       1  87 PRO QG 50 no 100.0   0.0 0.000 0.000 0.000 11  2 no 0.018 0 0 
       1  88 PHE QB 44 no 100.0 100.0 0.002 0.002 0.000 14  1 no 0.075 0 0 
       1  89 TRP QB  9 no 100.0  99.0 0.670 0.677 0.006 30 12 no 0.086 0 0 
       1  91 GLN QE 52 no 100.0 100.0 0.000 0.000 0.000 10  1 no 0.001 0 0 
       1  92 TYR QB 13 no 100.0   0.0 0.000 0.000 0.000 24  7 no 0.036 0 0 
       1  94 ASN QD 32 no 100.0  99.9 0.534 0.535 0.001 18  6 no 0.037 0 0 
       1  97 ASN QB 22 no 100.0  99.9 3.250 3.252 0.002 20  7 no 0.056 0 0 
       1  97 ASN QD 16 no 100.0 100.0 0.707 0.707 0.000 22  7 no 0.017 0 0 
       1 100 GLU QB 45 no 100.0  99.4 0.582 0.586 0.004 13  0 no 0.082 0 0 
       1 101 LEU QD  2 no 100.0  99.9 2.240 2.242 0.001 52  4 no 0.060 0 0 
       1 103 HIS QB 47 no 100.0 100.0 1.042 1.042 0.000 11  0 no 0.033 0 0 
       1 109 LEU QB 31 no  75.0  97.5 0.091 0.094 0.002 18  5 no 0.079 0 0 
       1 109 LEU QD  8 no 100.0  94.8 0.220 0.232 0.012 32 10 no 0.096 0 0 
       1 113 LEU QB 26 no 100.0 100.0 2.884 2.884 0.000 19  5 no 0.005 0 0 
       1 113 LEU QD  7 no 100.0  99.9 5.140 5.143 0.003 36 13 no 0.069 0 0 
       1 114 ASN QD 27 no  50.0  99.1 0.095 0.096 0.001 19  7 no 0.037 0 0 
       1 116 HIS QB 33 no 100.0 100.0 1.602 1.602 0.000 17  0 no 0.023 0 0 
       1 118 LEU QB 42 no 100.0  99.8 0.999 1.001 0.002 15  5 no 0.065 0 0 
       1 118 LEU QD  5 no 100.0 100.0 7.493 7.495 0.002 37  9 no 0.052 0 0 
       1 119 GLN QE 40 no 100.0  99.7 1.010 1.013 0.003 15  0 no 0.088 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Saturday, June 1, 2024 2:44:20 AM GMT (wattos1)