NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
575808 2mi2 19618 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2mi2


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        99
    _Stereo_assign_list.Swap_count           15
    _Stereo_assign_list.Swap_percentage      15.2
    _Stereo_assign_list.Deassign_count       95
    _Stereo_assign_list.Deassign_percentage  96.0
    _Stereo_assign_list.Model_count          15
    _Stereo_assign_list.Total_e_low_states   1824.960
    _Stereo_assign_list.Total_e_high_states  3328.665
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1   2 PHE QB 26 no  100.0 56.3  24.274  43.143  18.869  19  6 yes 2.239  59  81 
       1   3 ASP QB 40 no   93.3 20.2   1.658   8.201   6.543  12  0 yes 2.396  36  47 
       1   4 ILE QG 13 no   86.7 24.8   7.993  32.199  24.206  28 10 yes 2.386 127 156 
       1   5 GLY QA 63 no   80.0  0.1   0.005   4.892   4.887   8  2 yes 2.047  18  31 
       1   6 PHE QB 34 no  100.0 11.6   7.978  68.962  60.984  13  6 yes 7.409  74  85 
       1   7 SER QB 89 no  100.0 62.1   7.387  11.890   4.503   4  2 yes 1.428   9  16 
       1   8 GLU QB 23 no  100.0 65.7  45.538  69.316  23.777  20  6 yes 2.262  96 108 
       1   9 LEU QB 48 no  100.0 25.6  25.015  97.635  72.620  11  4 yes 8.505  44  56 
       1  12 VAL QG 16 no  100.0 50.5  28.871  57.185  28.314  24  0 yes 2.056 135 160 
       1  13 PHE QB 74 yes 100.0 16.3   0.870   5.323   4.453   6  2 yes 1.591  15  27 
       1  15 ILE QG 85 no  100.0 40.6   3.164   7.796   4.632   4  0 yes 1.729  30  30 
       1  17 LEU QD  2 no   86.7  2.4   3.285 135.608 132.323  96  2 yes 7.821 216 361 
       1  18 VAL QG 39 yes 100.0 52.6  16.178  30.749  14.571  12  0 yes 4.006  17  42 
       1  19 VAL QG 32 no  100.0 54.9  10.238  18.665   8.427  14  0 yes 2.033  46  73 
       1  20 LEU QB 73 no  100.0 41.6   3.197   7.679   4.482   6  2 yes 1.667  24  38 
       1  20 LEU QD  3 no  100.0 50.8  45.634  89.819  44.185  95 30 yes 2.182 235 425 
       1  21 GLY QA 44 no  100.0 74.2   2.579   3.478   0.899  12  2 yes 0.981   0  15 
       1  22 PRO QD 84 yes 100.0 55.6   2.475   4.448   1.973   4  0 yes 1.629  15  15 
       1  22 PRO QG 83 no   26.7  0.0   0.000   4.845   4.845   4  0 yes 2.283  16  30 
       1  24 ARG QB 24 yes 100.0 42.2   2.342   5.545   3.203  20 20 no  0.372   0   0 
       1  24 ARG QG 17 no  100.0 69.7  24.921  35.734  10.813  24 12 yes 2.210  30  30 
       1  25 LEU QD  1 no  100.0 79.0 323.945 409.824  85.879 118  2 yes 5.601 200 546 
       1  26 PRO QG 82 no  100.0 19.2   1.301   6.776   5.474   4  0 yes 2.146  15  30 
       1  27 VAL QG 43 yes  93.3 43.8   5.873  13.422   7.549  12  2 yes 2.074  59  60 
       1  29 VAL QG 25 yes  93.3 22.5   1.801   8.014   6.213  19  2 yes 2.284  16  35 
       1  30 LYS QG 29 no  100.0 11.2   2.202  19.743  17.541  17  0 yes 2.110  76  91 
       1  32 VAL QG 15 no  100.0 14.9   9.205  61.583  52.377  25  0 yes 4.553 113 165 
       1  34 GLY QA 38 no  100.0 13.5   1.455  10.775   9.320  12  0 yes 2.091  60  75 
       1  35 TRP QB 95 no  100.0  0.0   0.000   0.000   0.000   2  0 no  0.000   0   0 
       1  36 ILE QG 58 no   53.3 31.0   1.499   4.834   3.335   8  0 yes 1.911  14  37 
       1  39 LEU QB 31 no   73.3  7.8   2.728  35.158  32.430  14  0 yes 3.948  99 101 
       1  40 ARG QD 94 yes  86.7 52.9   0.468   0.884   0.416   2  0 yes 1.563   1   7 
       1  40 ARG QG 93 no   93.3 73.9   4.915   6.654   1.739   2  0 yes 1.945   9  12 
       1  46 VAL QG 20 no   80.0 23.4  20.956  89.578  68.623  22  2 yes 5.056 133 159 
       1  47 GLN QE 88 no   93.3 58.5   5.414   9.260   3.845   4  2 yes 2.091   9  14 
       1  47 GLN QG 46 no   93.3 44.5   6.774  15.238   8.463  12 10 yes 1.969  20  75 
       1  48 ASN QB 57 no  100.0 19.1  11.585  60.567  48.982   8  0 yes 6.689  45  45 
       1  48 ASN QD  7 no  100.0 22.4   6.194  27.652  21.458  60  0 yes 1.254 185 295 
       1  49 GLU QB 72 no  100.0 29.5  12.239  41.509  29.270   6  2 yes 4.726  44  59 
       1  50 LEU QD  5 no  100.0 64.0 137.495 214.721  77.226  75 12 yes 5.866 275 470 
       1  52 GLN QE 81 no   60.0 23.6   0.846   3.582   2.736   4  0 yes 1.931  16  17 
       1  54 LEU QB 37 no  100.0 80.8  18.045  22.326   4.281  12  0 yes 2.117  40  40 
       1  55 LYS QG 92 no   93.3 83.7   0.814   0.973   0.159   2  0 yes 1.006   1   3 
       1  56 LEU QB 14 no  100.0 78.3  59.759  76.343  16.584  26  6 yes 2.222 156 171 
       1  56 LEU QD  8 no  100.0 76.9  34.459  44.806  10.348  35  2 yes 1.783  70 132 
       1  57 GLN QB 99 no   80.0 20.2   6.668  32.945  26.277   1  0 yes 5.823  15  15 
       1  57 GLN QE 10 no   80.0 63.0  19.486  30.934  11.448  30  0 yes 1.135 110 185 
       1  59 PHE QB 87 yes 100.0 96.3   0.384   0.399   0.015   4  2 no  0.372   0   0 
       1  60 GLN QB 62 no  100.0 37.8  15.979  42.324  26.345   8  2 yes 3.098  61  70 
       1  60 GLN QE 75 yes  93.3 18.1   0.893   4.932   4.039   6  6 yes 1.738  13  28 
       1  61 ASP QB 52 yes  80.0 23.3   1.749   7.499   5.750   9  0 yes 2.346  27  36 
       1  62 SER QB 47 no   80.0 19.6   3.026  15.428  12.402  11  2 yes 2.160  57  78 
       1  63 LEU QB 61 no  100.0 55.8   7.682  13.766   6.084   8  2 yes 1.943  25  30 
       1  63 LEU QD 11 no  100.0 47.1  23.290  49.407  26.117  30  8 yes 2.054 142 174 
       1  65 LYS QB 98 yes  86.7 27.2   0.659   2.420   1.761   1  0 yes 1.650  15  15 
       1  65 LYS QG 97 no   60.0  3.0   0.722  24.455  23.733   1  0 yes 5.857  15  15 
       1  66 VAL QG 19 no  100.0 77.0  36.152  46.969  10.817  22  2 yes 2.099  55  84 
       1  67 GLU QB 60 yes 100.0 21.4   2.297  10.718   8.421   8  2 yes 1.969  36  49 
       1  67 GLU QG 65 no   66.7 16.3   1.682  10.306   8.624   8  8 yes 1.838  33  51 
       1  68 LYS QG 33 no   80.0 58.4  11.820  20.250   8.429  14  2 yes 2.597  33  74 
       1  70 SER QB 51 no  100.0 19.0   8.893  46.739  37.847  10  4 yes 6.046  49  82 
       1  71 LEU QB 28 no  100.0 60.9  26.185  42.979  16.794  17  0 yes 3.727  50  95 
       1  71 LEU QD  9 no   53.3 36.3  17.919  49.388  31.468  33 12 yes 4.561 146 172 
       1  73 ASN QB 59 no   26.7  0.0   0.000  81.080  81.080   8  2 yes 6.879  60  60 
       1  73 ASN QD 96 no  100.0 99.7   0.441   0.442   0.001   2  2 no  0.000   0   0 
       1  74 LEU QB 21 no  100.0 31.7  22.424  70.773  48.349  22 12 yes 6.204  73  86 
       1  74 LEU QD  6 no  100.0 71.9  92.423 128.502  36.079  69  4 yes 2.104 264 397 
       1  76 PRO QB 71 no  100.0 59.3   8.133  13.705   5.573   6  0 yes 1.636  30  45 
       1  76 PRO QD 80 no  100.0  0.0   0.000   5.287   5.287   4  0 yes 1.819  30  30 
       1  77 GLU QB 79 no  100.0 61.7   6.488  10.521   4.033   4  0 yes 1.994  16  22 
       1  77 GLU QG 70 no   93.3 36.6   2.893   7.910   5.017   6  0 yes 1.752  38  44 
       1  78 LEU QD  4 no  100.0 55.2 126.070 228.329 102.259  81  4 yes 5.766 399 515 
       1  79 LYS QB 78 no    6.7  0.0   0.000   3.564   3.564   4  0 yes 2.157  15  15 
       1  81 SER QB 45 no  100.0 57.0   9.154  16.071   6.917  12  4 yes 2.025  30  70 
       1  82 MET QB 56 yes 100.0 26.7   1.834   6.873   5.039   8  0 yes 1.879  30  30 
       1  82 MET QG 42 no  100.0 33.0   4.994  15.120  10.126  12  2 yes 2.056  30  74 
       1  83 ASP QB 41 no  100.0 58.4  11.145  19.084   7.939  12  2 yes 1.997  44  73 
       1  84 GLU QB 50 no  100.0 34.6   3.821  11.056   7.235  10  2 yes 2.030  30  45 
       1  84 GLU QG 22 no   93.3  2.3   0.602  26.639  26.037  20  0 yes 2.041 116 141 
       1  85 LEU QB 49 no  100.0 59.0  11.943  20.243   8.300  10  0 yes 2.002  45  74 
       1  86 ARG QB 69 no  100.0  8.3   0.337   4.075   3.738   6  0 yes 1.705  16  45 
       1  86 ARG QG 27 no  100.0 36.0   8.194  22.753  14.559  18  6 yes 2.189  63 101 
       1  87 GLN QE 86 no  100.0 81.6  11.165  13.688   2.523   4  2 yes 1.621  10  28 
       1  87 GLN QG 36 yes 100.0  4.1   0.774  18.827  18.053  12  0 yes 2.560  75  95 
       1  90 GLU QG 18 no  100.0 11.1   3.181  28.604  25.423  23  6 yes 2.124 105 133 
       1  92 MET QB 55 yes 100.0 29.9   1.478   4.941   3.463   8  0 yes 1.382  30  45 
       1  92 MET QG 77 no  100.0 69.8   9.933  14.221   4.288   4  0 yes 2.021  15  23 
       1  93 LYS QB 54 no  100.0 21.2   8.932  42.107  33.175   8  0 yes 4.646  49  60 
       1  93 LYS QG 64 no  100.0 38.6   3.145   8.144   4.999   8  3 yes 2.081  19  41 
       1  94 ARG QG 68 no   80.0  4.4   0.238   5.417   5.179   6  0 yes 2.002  24  36 
       1  95 SER QB 76 no  100.0  0.0   0.000   3.774   3.774   5  0 yes 1.996  21  28 
       1  96 TYR QB 30 no  100.0  7.4   0.574   7.717   7.144  14  0 yes 1.691  46  67 
       1  97 VAL QG 12 no  100.0 27.8  16.517  59.352  42.835  28  3 yes 4.742 136 165 
       1  99 ASN QB 35 no   60.0  5.5   0.250   4.566   4.316  12  0 yes 1.828  28  55 
       1 101 PRO QB 91 no  100.0 52.2   1.944   3.727   1.783   2  0 yes 1.489  15  15 
       1 101 PRO QG 67 no  100.0 43.8   4.108   9.379   5.271   6  0 yes 2.302  22  24 
       1 102 LEU QB 66 no   60.0  4.1   0.230   5.572   5.343   6  0 yes 2.033  25  40 
       1 102 LEU QD 53 no   40.0 29.5   5.176  17.568  12.392   8  0 yes 2.389  49  51 
       1 103 GLU QG 90 no   93.3 62.0   6.101   9.843   3.742   2  0 yes 2.186  15  15 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Monday, April 29, 2024 2:30:05 AM GMT (wattos1)