NMR Restraints Grid
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NMR Restraints Grid |
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Result table
| image | mrblock_id | pdb_id | bmrb_id | cing | stage | program | type | subtype |
|
|
522145 |
2y95   |
16714 | cing | 2-parsed | STAR | entry | full |
data_2y95_MR_file_constraints
save_Conversion_project
_Study_list.Sf_category study_list
_Study_list.Entry_ID parsed_2y95
_Study_list.ID 1
loop_
_Study.ID
_Study.Name
_Study.Type
_Study.Details
_Study.Entry_ID
_Study.Study_list_ID
1 "Conversion project" NMR . parsed_2y95 1
stop_
save_
save_entry_information
_Entry.Sf_category entry_information
_Entry.ID parsed_2y95
_Entry.Title "Original constraint list(s)"
_Entry.Version_type original
_Entry.Submission_date .
_Entry.Accession_date .
_Entry.Last_release_date .
_Entry.Original_release_date .
_Entry.Origination .
_Entry.NMR_STAR_version 3.1
_Entry.Original_NMR_STAR_version .
_Entry.Experimental_method NMR
_Entry.Experimental_method_subtype .
loop_
_Related_entries.Database_name
_Related_entries.Database_accession_code
_Related_entries.Relationship
_Related_entries.Entry_ID
PDB 2y95 "Master copy" parsed_2y95
stop_
save_
save_global_Org_file_characteristics
_Constraint_stat_list.Sf_category constraint_statistics
_Constraint_stat_list.Entry_ID parsed_2y95
_Constraint_stat_list.ID 1
loop_
_Constraint_file.ID
_Constraint_file.Constraint_filename
_Constraint_file.Software_ID
_Constraint_file.Software_label
_Constraint_file.Software_name
_Constraint_file.Block_ID
_Constraint_file.Constraint_type
_Constraint_file.Constraint_subtype
_Constraint_file.Constraint_subsubtype
_Constraint_file.Constraint_number
_Constraint_file.Entry_ID
_Constraint_file.Constraint_stat_list_ID
1 2y95.mr . . "MR format" 1 comment "Not applicable" "Not applicable" 0 parsed_2y95 1
1 2y95.mr . . STAR 2 comment "Not applicable" "Not applicable" 0 parsed_2y95 1
1 2y95.mr . . STAR 3 distance NOE simple 0 parsed_2y95 1
1 2y95.mr . . STAR 4 distance "hydrogen bond" simple 0 parsed_2y95 1
1 2y95.mr . . STAR 5 "dihedral angle" "Not applicable" "Not applicable" 0 parsed_2y95 1
1 2y95.mr . . "MR format" 6 "nomenclature mapping" "Not applicable" "Not applicable" 0 parsed_2y95 1
stop_
save_
save_MR_file_comment_1
_Org_constr_file_comment.Sf_category org_constr_file_comment
_Org_constr_file_comment.Entry_ID parsed_2y95
_Org_constr_file_comment.ID 1
_Org_constr_file_comment.Constraint_file_ID 1
_Org_constr_file_comment.Block_ID 1
_Org_constr_file_comment.Details "Generated by Wattos"
_Org_constr_file_comment.Comment
;
*HEADER RNA 11-FEB-11 2Y95
*TITLE SOLUTION STRUCTURE OF AUCG TETRALOOP HAIRPIN FOUND IN HUMAN
*TITLE 2 XIST RNA A-REPEATS ESSENTIAL FOR X-INACTIVATION
*COMPND MOL_ID: 1;
*COMPND 2 MOLECULE: 5'-R(*GP*GP*CP*GP*CP*AP*UP*CP*GP*GP*CP*GP*CP*C)-3';
*COMPND 3 CHAIN: A;
*COMPND 4 FRAGMENT: HAIRPIN 1, RESIDUES 609-622;
*COMPND 5 SYNONYM: XIST RNA A-REPEAT, HOMO SAPIENS X (INACTIVE)-SPECIFIC
*COMPND 6 TRANSCRIPT, XIST;
*COMPND 7 MUTATION: YES;
*COMPND 8 OTHER_DETAILS: HAIRPIN 1 FROM THE 6TH HUMAN A-REPEAT CORRESPONDING
*COMPND 9 TO NUCLEOTIDES 609-622 IN M97168.1 GENBANK ENTRY. THE THIRD G-C
*COMPND 10 BASE-PAIR IS REPLACED BY C-G TO FACILITATE CHEMICAL SHIFT
*COMPND 11 ASSIGNMENTS AND THE CLOSING G-U BASE PAIR IS REPLACED BY G-C
*SOURCE MOL_ID: 1;
*SOURCE 2 SYNTHETIC: YES;
*SOURCE 3 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
*SOURCE 4 ORGANISM_COMMON: HUMAN;
*SOURCE 5 ORGANISM_TAXID: 9606
*KEYWDS RNA, X CHROMOSOME INACTIVATION, RNA STEMLOOP
*EXPDTA SOLUTION NMR
*AUTHOR M.M.DUSZCZYK,M.SATTLER
*REVDAT 1 14-FEB-11 2Y95 0
;
save_
save_MR_file_comment_2
_Org_constr_file_comment.Sf_category org_constr_file_comment
_Org_constr_file_comment.Entry_ID parsed_2y95
_Org_constr_file_comment.ID 2
_Org_constr_file_comment.Constraint_file_ID 1
_Org_constr_file_comment.Block_ID 2
_Org_constr_file_comment.Details "Generated by Wattos"
_Org_constr_file_comment.Comment
;
data_/ebi/msd/pdbdeposit/deposit/autodep4Entries/EBI-47361/origFilesMod/EBI-47361.nmr
save_entry_information
_Entry.Sf_category entry_information
_Entry.Sf_framecode entry_information
_Entry.ID 1
_Entry.NMR_STAR_version 3.1
_Entry.Experimental_method NMR
_Entry.Experimental_method_subtype solution
save_
save_assembly
_Assembly.Sf_category assembly
_Assembly.Sf_framecode assembly
_Assembly.Entry_ID 1
_Assembly.ID 1
_Assembly.Name "AUCG tetraloop hairpin"
_Assembly.Number_of_components 1
_Assembly.Organic_ligands 0
_Assembly.Metal_ions 0
_Assembly.Non_standard_bonds no
_Assembly.Paramagnetic no
_Assembly.Thiol_state "not present"
_Assembly.Molecular_mass 4556.74774
loop_
_Entity_assembly.ID
_Entity_assembly.Entity_assembly_name
_Entity_assembly.Entity_ID
_Entity_assembly.Entity_label
_Entity_assembly.Asym_ID
_Entity_assembly.PDB_chain_ID
_Entity_assembly.Experimental_data_reported
_Entity_assembly.Physical_state
_Entity_assembly.Conformational_isomer
_Entity_assembly.Chemical_exchange_state
_Entity_assembly.Magnetic_equivalence_group_code
_Entity_assembly.Role
_Entity_assembly.Details
_Entity_assembly.Entry_ID
_Entity_assembly.Assembly_ID
1 entity 1 $entity A . yes native no no . . "hairpin 1 from the 6th human A-repeat corresponding to nucleotides 609-622 in M97168.1 GenBank entry. The third G-C base-pair is replaced by C-G to facilitate chemical shift assignments and the closing G-U base pair is replaced by G-C" 1 1
stop_
save_
save_entity
_Entity.Sf_category entity
_Entity.Sf_framecode entity
_Entity.Entry_ID 1
_Entity.ID 1
_Entity.Name entity
_Entity.Type polymer
_Entity.Polymer_type polyribonucleotide
_Entity.Polymer_strand_ID A
_Entity.Polymer_seq_one_letter_code GGCGCAUCGGCGCC
_Entity.Ambiguous_conformational_states no
_Entity.Ambiguous_chem_comp_sites no
_Entity.Nstd_monomer no
_Entity.Nstd_chirality yes
_Entity.Nstd_linkage no
_Entity.Number_of_monomers 14
_Entity.Paramagnetic no
_Entity.Thiol_state "not present"
_Entity.Parent_entity_ID 1
_Entity.Formula_weight 4556.74774
_Entity.Details "hairpin 1 from the 6th human A-repeat corresponding to nucleotides 609-622 in M97168.1 GenBank entry. The third G-C base-pair is replaced by C-G to facilitate chemical shift assignments and the closing G-U base pair is replaced by G-C"
loop_
_Entity_db_link.Author_supplied
_Entity_db_link.Database_code
_Entity_db_link.Accession_code
_Entity_db_link.Entry_mol_code
_Entity_db_link.Entry_mol_name
_Entity_db_link.Entry_experimental_method
_Entity_db_link.Entry_structure_resolution
_Entity_db_link.Entry_relation_type
_Entity_db_link.Entry_details
_Entity_db_link.Chimera_segment
_Entity_db_link.Seq_query_to_submitted_percent
_Entity_db_link.Seq_subject_length
_Entity_db_link.Seq_identity
_Entity_db_link.Seq_positive
_Entity_db_link.Seq_homology_expectation_val
_Entity_db_link.Seq_align_begin
_Entity_db_link.Seq_align_end
_Entity_db_link.Seq_difference_details
_Entity_db_link.Seq_alignment_details
_Entity_db_link.Entry_ID
_Entity_db_link.Entity_ID
. GB XIST . M97168.1 . . . . . . . . . . . . . . 1 1
stop_
loop_
_Entity_biological_function.Biological_function
_Entity_biological_function.Entry_ID
_Entity_biological_function.Entity_ID
"Essential for initiation of X-Chromosome Inactivation in female mammals" 1 1
stop_
loop_
_Entity_comp_index.ID
_Entity_comp_index.Auth_seq_ID
_Entity_comp_index.Comp_ID
_Entity_comp_index.Comp_label
_Entity_comp_index.Entry_ID
_Entity_comp_index.Entity_ID
1 . G . 1 1
2 . G . 1 1
3 . C . 1 1
4 . G . 1 1
5 . C . 1 1
6 . A . 1 1
7 . U . 1 1
8 . C . 1 1
9 . G . 1 1
10 . G . 1 1
11 . C . 1 1
12 . G . 1 1
13 . C . 1 1
14 . C . 1 1
stop_
loop_
_Entity_poly_seq.Hetero
_Entity_poly_seq.Mon_ID
_Entity_poly_seq.Num
_Entity_poly_seq.Comp_index_ID
_Entity_poly_seq.Entry_ID
_Entity_poly_seq.Entity_ID
. G 1 1 1 1
. G 2 2 1 1
. C 3 3 1 1
. G 4 4 1 1
. C 5 5 1 1
. A 6 6 1 1
. U 7 7 1 1
. C 8 8 1 1
. G 9 9 1 1
. G 10 10 1 1
. C 11 11 1 1
. G 12 12 1 1
. C 13 13 1 1
. C 14 14 1 1
stop_
save_
save_conformer_statistics
_Conformer_stat_list.Sf_category conformer_statistics
_Conformer_stat_list.Sf_framecode conformer_statistics
_Conformer_stat_list.Entry_ID 1
_Conformer_stat_list.ID 1
save_
save_constraint_statistics
_Constraint_stat_list.Sf_category constraint_statistics
_Constraint_stat_list.Sf_framecode constraint_statistics
_Constraint_stat_list.Entry_ID 1
_Constraint_stat_list.ID 1
loop_
_Constraint_file.ID
_Constraint_file.Constraint_filename
_Constraint_file.Software_ID
_Constraint_file.Software_label
_Constraint_file.Software_name
_Constraint_file.Block_ID
_Constraint_file.Constraint_type
_Constraint_file.Constraint_subtype
_Constraint_file.Constraint_subsubtype
_Constraint_file.Constraint_number
_Constraint_file.Entry_ID
_Constraint_file.Constraint_stat_list_ID
1 "From CCPN project: 'bmr16714_deposited'" . . . . distance "general distance" . 292 1 1
2 "From CCPN project: 'bmr16714_deposited'" . . . . distance "hydrogen bond" . 25 1 1
3 "From CCPN project: 'bmr16714_deposited'" . . . . "dihedral angle" "Not applicable" . 96 1 1
stop_
save_
;
save_
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