NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
511569 2rrq 11437 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2rrq


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        38
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       4
    _Stereo_assign_list.Deassign_percentage  10.5
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   5.485
    _Stereo_assign_list.Total_e_high_states  32.134
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  1 DC Q2' 27 no 100.0 100.0 2.014 2.014 0.000  3 0 no  0.015 0  0 
       1  1 DC Q4  38 no 100.0   0.0 0.000 0.000 0.000  1 1 no  0.000 0  0 
       1  2 DC Q2' 26 no 100.0  87.7 1.373 1.566 0.193  3 0 no  0.649 0  7 
       1  2 DC Q4  15 no 100.0 100.0 0.004 0.004 0.000  5 2 no  0.097 0  0 
       1  3 DT Q2' 13 no 100.0  83.4 0.906 1.086 0.180  5 0 no  0.666 0  4 
       1  4 DT Q2' 19 no 100.0  99.9 0.418 0.418 0.000  4 0 no  0.062 0  0 
       1  5 DC Q2' 25 no 100.0  66.2 0.062 0.094 0.032  3 0 no  0.152 0  0 
       1  5 DC Q4  24 no 100.0   0.0 0.000 0.000 0.000  3 0 no  0.000 0  0 
       1  6 DA Q2'  1 no  40.0  34.6 0.097 0.280 0.183 10 0 no  0.418 0  0 
       1  6 DA Q6  32 no 100.0   0.0 0.000 0.000 0.000  2 0 no  0.000 0  0 
       1  8 DT Q2' 12 no 100.0  95.7 0.848 0.886 0.038  5 0 no  0.247 0  0 
       1  9 DA Q2' 11 no 100.0  99.8 0.880 0.881 0.002  5 0 no  0.078 0  0 
       1 10 DC Q2' 10 no 100.0 100.0 0.721 0.721 0.000  5 0 no  0.060 0  0 
       1 10 DC Q4  31 no 100.0   0.0 0.000 0.000 0.000  2 0 no  0.000 0  0 
       1 11 DA Q2'  4 no 100.0  48.0 1.548 3.227 1.679  7 0 yes 1.070 3 40 
       1 12 DT Q2'  9 no 100.0  92.5 0.166 0.179 0.013  5 0 no  0.187 0  0 
       1 13 DC Q2' 23 no 100.0  99.4 1.032 1.038 0.006  3 0 no  0.072 0  0 
       1 13 DC Q4  30 no 100.0   0.0 0.000 0.000 0.000  2 0 no  0.000 0  0 
       1 14 DC Q4  29 no   5.0 100.0 0.006 0.006 0.000  2 0 no  0.000 0  0 
       2  1 DG Q2' 37 no 100.0   0.0 0.000 0.000 0.000  1 0 no  0.000 0  0 
       2  2 DG Q2' 36 no 100.0  99.1 0.580 0.585 0.005  1 0 no  0.086 0  0 
       2  3 DA Q2'  3 no 100.0  66.0 2.786 4.219 1.433  8 1 yes 0.996 0 40 
       2  3 DA Q6  18 no   5.0 100.0 0.001 0.001 0.000  4 0 no  0.000 0  0 
       2  4 DT Q2'  5 no 100.0  99.9 3.103 3.104 0.002  7 1 no  0.067 0  0 
       2  5 DG Q2'  8 no 100.0  65.4 1.812 2.771 0.959  5 0 yes 0.911 0 33 
       2  6 DT Q2'  7 no 100.0  99.9 0.367 0.367 0.000  5 0 no  0.061 0  0 
       2  7 DA Q2' 17 no 100.0  96.4 2.456 2.547 0.091  4 0 no  0.280 0  0 
       2  7 DA Q6  35 no 100.0   0.0 0.000 0.000 0.000  1 0 no  0.000 0  0 
       2  8 DA Q2'  6 no 100.0  61.8 0.890 1.441 0.551  5 0 yes 0.797 0 18 
       2  8 DA Q6  34 no 100.0   0.0 0.000 0.000 0.000  1 0 no  0.000 0  0 
       2  9 DT Q2'  2 no 100.0  96.3 0.478 0.496 0.018  8 0 no  0.191 0  0 
       2 10 DG Q2' 22 no 100.0  99.7 0.249 0.249 0.001  3 0 no  0.055 0  0 
       2 11 DA Q2' 16 no 100.0  95.0 1.124 1.183 0.060  4 0 no  0.266 0  0 
       2 11 DA Q6  33 no 100.0   0.0 0.000 0.000 0.000  1 0 no  0.000 0  0 
       2 12 DA Q2' 21 no 100.0  98.2 1.813 1.846 0.034  3 0 no  0.199 0  0 
       2 12 DA Q6  14 no 100.0   0.0 0.000 0.002 0.002  5 1 no  0.062 0  0 
       2 13 DG Q2' 20 no 100.0  98.5 0.240 0.243 0.004  3 0 no  0.096 0  0 
       2 14 DG Q2' 28 no 100.0 100.0 0.677 0.677 0.000  2 0 no  0.036 0  0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Thursday, May 23, 2024 8:24:24 AM GMT (wattos1)