NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
506515 1x6h 10246 cing 4-filtered-FRED Wattos check stereo assignment distance


data_1x6h


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        70
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.020
    _Stereo_assign_list.Total_e_high_states  106.872
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  8 ARG QB 70 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 13 GLU QB 69 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 14 LYS QB 29 no 100.0 100.0  0.793  0.793 0.000 11  3 no 0.044 0 0 
       1 14 LYS QG 13 no 100.0 100.0  1.400  1.400 0.001 20  6 no 0.071 0 0 
       1 15 PRO QB 51 no 100.0 100.0  0.328  0.328 0.000  6  0 no 0.000 0 0 
       1 15 PRO QD 16 no 100.0  99.9  1.046  1.046 0.001 19  7 no 0.071 0 0 
       1 15 PRO QG 33 no 100.0   0.0  0.000  0.000 0.000 10  0 no 0.002 0 0 
       1 16 TYR QB 12 no 100.0  99.8  1.078  1.079 0.002 21 11 no 0.106 0 0 
       1 18 CYS QB  3 no 100.0 100.0  1.776  1.776 0.000 30  7 no 0.019 0 0 
       1 19 SER QB 68 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.005 0 0 
       1 20 HIS QB 42 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.000 0 0 
       1 21 CYS QB 36 no 100.0 100.0  2.124  2.124 0.000  9  1 no 0.000 0 0 
       1 22 ASP QB 55 no 100.0 100.0  0.287  0.287 0.000  5  1 no 0.000 0 0 
       1 23 LYS QB 28 no 100.0   0.0  0.000  0.000 0.000 12  4 no 0.002 0 0 
       1 23 LYS QD 50 no   0.0   0.0  0.000  0.000 0.000  6  0 no 0.038 0 0 
       1 25 PHE QB  4 no 100.0 100.0  4.296  4.296 0.000 30 14 no 0.047 0 0 
       1 26 ARG QB 54 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.000 0 0 
       1 27 GLN QB 26 no 100.0 100.0  3.054  3.055 0.001 14  5 no 0.109 0 0 
       1 27 GLN QG 67 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 28 LYS QB 58 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 28 LYS QG 66 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 29 GLN QB 37 no 100.0 100.0  0.790  0.790 0.000  9  4 no 0.062 0 0 
       1 30 LEU QB 10 no 100.0  99.9  0.805  0.805 0.001 23 10 no 0.085 0 0 
       1 30 LEU QD 17 no 100.0   0.0  0.000  0.001 0.001 18  8 no 0.073 0 0 
       1 31 LEU QB  7 no 100.0 100.0  0.698  0.698 0.000 28 11 no 0.018 0 0 
       1 31 LEU QD  1 no 100.0 100.0 41.591 41.591 0.000 45 15 no 0.055 0 0 
       1 32 ASP QB 25 no 100.0 100.0  0.713  0.713 0.000 14  3 no 0.020 0 0 
       1 33 MET QG 41 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.000 0 0 
       1 34 HIS QB 20 no 100.0  99.9  1.551  1.553 0.002 17  2 no 0.057 0 0 
       1 35 PHE QB 22 no 100.0  99.8  2.996  3.001 0.005 16  3 no 0.097 0 0 
       1 36 LYS QB 14 no 100.0 100.0  1.524  1.524 0.000 19  3 no 0.031 0 0 
       1 36 LYS QG 32 no   0.0   0.0  0.000  0.000 0.000 10  0 no 0.024 0 0 
       1 37 ARG QB 18 no 100.0 100.0  1.543  1.544 0.000 17  0 no 0.065 0 0 
       1 37 ARG QG 40 no 100.0   0.0  0.000  0.001 0.001  8  0 no 0.136 0 0 
       1 38 TYR QB 24 no 100.0 100.0  1.208  1.208 0.000 14  0 no 0.012 0 0 
       1 39 HIS QB 27 no 100.0   0.0  0.000  0.000 0.000 12  0 no 0.012 0 0 
       1 40 ASP QB 23 no 100.0   0.0  0.000  0.000 0.000 16  4 no 0.043 0 0 
       1 41 PRO QB 65 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 41 PRO QD 30 no 100.0 100.0  0.408  0.408 0.000 11  4 no 0.000 0 0 
       1 41 PRO QG 53 no 100.0 100.0  3.765  3.765 0.000  6  2 no 0.000 0 0 
       1 42 ASN QD 52 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.000 0 0 
       1 43 PHE QB 44 no 100.0   0.0  0.000  0.000 0.000  8  2 no 0.025 0 0 
       1 44 VAL QG 21 no 100.0 100.0  7.132  7.132 0.000 16  2 no 0.060 0 0 
       1 45 PRO QB 46 no 100.0 100.0  3.353  3.353 0.000  7  1 no 0.019 0 0 
       1 45 PRO QG 45 no 100.0 100.0  2.393  2.393 0.000  7  1 no 0.060 0 0 
       1 48 PHE QB  8 no 100.0 100.0  1.681  1.681 0.000 27  8 no 0.012 0 0 
       1 49 VAL QG 43 no 100.0   0.0  0.000  0.001 0.001  8  2 no 0.056 0 0 
       1 50 CYS QB  2 no 100.0 100.0  3.607  3.608 0.001 34  8 no 0.056 0 0 
       1 52 LYS QB 35 no 100.0   0.0  0.000  0.000 0.000 10  4 no 0.041 0 0 
       1 52 LYS QG 49 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.047 0 0 
       1 53 CYS QB 19 no 100.0 100.0  0.940  0.940 0.000 17  2 no 0.000 0 0 
       1 54 GLY QA 59 no 100.0   0.0  0.000  0.000 0.000  4  2 no 0.000 0 0 
       1 55 LYS QB 15 no 100.0 100.0  1.446  1.446 0.000 19  4 no 0.015 0 0 
       1 55 LYS QD 39 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.000 0 0 
       1 55 LYS QG 48 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.006 0 0 
       1 57 PHE QB  5 no 100.0 100.0  3.165  3.165 0.000 29  8 no 0.017 0 0 
       1 59 ARG QB 57 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.002 0 0 
       1 59 ARG QG 64 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.028 0 0 
       1 60 ARG QB 38 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.009 0 0 
       1 60 ARG QG 47 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1 63 MET QB 11 no 100.0 100.0  0.889  0.889 0.000 22  9 no 0.017 0 0 
       1 66 HIS QB  6 no 100.0 100.0  3.260  3.261 0.000 28  3 no 0.041 0 0 
       1 69 ASN QB 63 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 69 ASN QD 62 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 70 CYS QB  9 no 100.0 100.0  2.084  2.084 0.000 23  4 no 0.055 0 0 
       1 72 GLY QA 34 no 100.0 100.0  3.130  3.130 0.000 10  4 no 0.000 0 0 
       1 73 PRO QB 61 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 74 ASP QB 60 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 76 VAL QG 31 no 100.0   0.0  0.000  0.000 0.000 10  0 no 0.034 0 0 
       1 82 GLY QA 56 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Saturday, May 11, 2024 5:13:12 AM GMT (wattos1)