NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
503502 2l7p 17365 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2l7p


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        74
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.026
    _Stereo_assign_list.Total_e_high_states  87.758
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  3 ARG QB 74 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 10 GLU QG 73 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 14 VAL QG 52 no 100.0   0.0  0.000  0.003 0.003  4  0 no 0.169 0 0 
       1 15 ASP QB 72 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 18 ILE QG 32 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.017 0 0 
       1 19 GLU QB 71 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 22 TYR QB 51 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.011 0 0 
       1 25 GLU QB 50 no  60.0  96.0  0.023  0.024 0.001  4  0 no 0.119 0 0 
       1 25 GLU QG 49 no   0.0   0.0  0.000  0.000 0.000  4  0 no 0.074 0 0 
       1 28 TRP QB 20 no 100.0 100.0  1.204  1.204 0.000  9  2 no 0.000 0 0 
       1 29 VAL QG  3 no   0.0   0.0  0.000  0.000 0.000 24  4 no 0.039 0 0 
       1 30 ARG QB 19 no 100.0 100.0  1.267  1.267 0.000  9  0 no 0.019 0 0 
       1 30 ARG QG 13 no 100.0 100.0  2.665  2.665 0.000 11  1 no 0.019 0 0 
       1 31 CYS QB  6 no 100.0 100.0  3.353  3.353 0.000 17  1 no 0.046 0 0 
       1 32 ASP QB 24 no 100.0 100.0  1.028  1.028 0.000  7  0 no 0.003 0 0 
       1 33 ASP QB 31 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1 34 CYS QB 70 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 37 TRP QB 22 no 100.0 100.0  0.468  0.468 0.000  8  0 no 0.000 0 0 
       1 39 ARG QB 48 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 39 ARG QG 30 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.002 0 0 
       1 40 ILE QG  8 no 100.0 100.0  8.723  8.725 0.002 14  3 no 0.051 0 0 
       1 41 PRO QB 29 no 100.0 100.0  1.996  1.996 0.000  6  0 no 0.000 0 0 
       1 41 PRO QD 12 no 100.0 100.0  1.593  1.593 0.000 11  1 no 0.000 0 0 
       1 41 PRO QG 47 no 100.0 100.0  3.250  3.250 0.000  4  0 no 0.000 0 0 
       1 43 SER QB 69 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 44 VAL QG 68 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 45 VAL QG  2 no 100.0 100.0 25.388 25.389 0.001 24  2 no 0.042 0 0 
       1 48 ILE QG 46 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 50 GLU QB 45 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 51 SER QB 67 no  30.0 100.0  0.004  0.004 0.000  2  0 no 0.003 0 0 
       1 53 ARG QD 66 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 54 TRP QB 21 no 100.0 100.0  1.584  1.584 0.000  8  0 no 0.009 0 0 
       1 56 CYS QB 18 no 100.0 100.0  0.228  0.228 0.000  9  0 no 0.000 0 0 
       1 58 ASN QB 17 no 100.0 100.0  0.653  0.653 0.000  9  0 no 0.016 0 0 
       1 58 ASN QD 14 no 100.0 100.0  3.059  3.060 0.001 10  0 no 0.079 0 0 
       1 59 ASN QB  7 no 100.0 100.0  4.272  4.272 0.000 17  2 no 0.012 0 0 
       1 59 ASN QD  4 no 100.0 100.0  0.679  0.679 0.000 23 10 no 0.026 0 0 
       1 60 SER QB 44 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 61 ASP QB 15 no 100.0 100.0  0.708  0.708 0.000 10  4 no 0.011 0 0 
       1 62 LYS QB 43 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 63 ARG QB 42 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.033 0 0 
       1 64 PHE QB 23 no 100.0   0.0  0.000  0.000 0.000  8  4 no 0.013 0 0 
       1 66 ASP QB 10 no 100.0 100.0  4.321  4.321 0.000 12  0 no 0.023 0 0 
       1 67 CYS QB 33 no 100.0 100.0  1.210  1.210 0.000  5  0 no 0.015 0 0 
       1 68 SER QB 41 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 69 LYS QB 65 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 70 SER QB 64 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 71 GLN QB 40 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 71 GLN QE  5 no 100.0 100.0  2.666  2.666 0.001 21  0 no 0.048 0 0 
       1 72 GLU QG 39 no   0.0   0.0  0.000  0.000 0.000  4  0 no 0.014 0 0 
       1 73 MET QB 16 no 100.0  99.9  0.589  0.590 0.000  9  0 no 0.032 0 0 
       1 73 MET QG 63 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 74 SER QB 38 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.007 0 0 
       1 75 ASN QD 37 no 100.0 100.0  1.535  1.535 0.000  4  0 no 0.012 0 0 
       1 76 GLU QB 62 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 76 GLU QG 36 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 78 ILE QG 28 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.017 0 0 
       1 79 ASN QD 27 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1 80 GLU QG 26 no 100.0   0.0  0.000  0.001 0.001  6  0 no 0.073 0 0 
       1 82 LEU QB  9 no 100.0 100.0  1.797  1.797 0.000 14  5 no 0.000 0 0 
       1 82 LEU QD  1 no 100.0  99.9  9.753  9.760 0.006 37  9 no 0.101 0 0 
       1 84 ILE QG 11 no 100.0 100.0  3.660  3.660 0.000 12  2 no 0.026 0 0 
       1 86 GLN QB 35 no 100.0   0.0  0.000  0.004 0.004  4  0 no 0.297 0 0 
       1 86 GLN QE 53 no   0.0   0.0  0.000  0.000 0.000  4  2 no 0.038 0 0 
       1 87 ASP QB 61 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 88 GLU QB 25 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.044 0 0 
       1 90 ASP QB 34 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 92 TYR QB 60 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.019 0 0 
       1 93 ASP QB 59 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 94 CYS QB 58 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 95 ASP QB 57 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.006 0 0 
       1 98 LYS QB 56 no 100.0   0.0  0.000  0.002 0.002  2  0 no 0.097 0 0 
       1 98 LYS QG 55 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 99 ARG QB 54 no  70.0  99.0  0.057  0.057 0.001  2  0 no 0.105 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Wednesday, May 29, 2024 1:08:03 AM GMT (wattos1)