NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
474955 2kg1 16194 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2kg1


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        80
    _Stereo_assign_list.Swap_count           1
    _Stereo_assign_list.Swap_percentage      1.3
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.044
    _Stereo_assign_list.Total_e_high_states  11.124
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  39 PHE QB 46 no   85.0  99.4 0.199 0.200 0.001  5 0 no 0.063 0 0 
       1  41 VAL QG 11 no   95.0  99.7 0.132 0.132 0.000 12 3 no 0.092 0 0 
       1  42 GLN QB 66 no  100.0 100.0 0.004 0.004 0.000  3 0 no 0.115 0 0 
       1  46 GLY QA 59 no   75.0 100.0 0.091 0.091 0.000  4 0 no 0.000 0 0 
       1  47 HIS QB 58 no    5.0 100.0 0.042 0.042 0.000  4 0 no 0.000 0 0 
       1  49 VAL QG  3 no  100.0 100.0 0.441 0.441 0.000 23 3 no 0.000 0 0 
       1  51 MET QB 62 no   20.0 100.0 0.013 0.013 0.000  4 1 no 0.000 0 0 
       1  51 MET QG 65 no  100.0   0.0 0.000 0.000 0.000  3 0 no 0.000 0 0 
       1  54 LEU QB 80 no  100.0   0.0 0.000 0.000 0.000  1 1 no 0.000 0 0 
       1  54 LEU QD 10 no   85.0 100.0 0.386 0.386 0.000 15 1 no 0.000 0 0 
       1  56 TYR QB 79 no  100.0   0.0 0.000 0.000 0.000  1 1 no 0.000 0 0 
       1  60 GLU QB 20 no  100.0   0.0 0.000 0.000 0.000  9 1 no 0.000 0 0 
       1  60 GLU QG  9 no  100.0   0.0 0.000 0.000 0.000 16 3 no 0.000 0 0 
       1  61 ASN QB 38 no  100.0 100.0 0.708 0.708 0.000  6 1 no 0.000 0 0 
       1  61 ASN QD 23 no   85.0  92.2 0.016 0.017 0.001  8 1 no 0.090 0 0 
       1  62 ASP QB 13 no  100.0   0.0 0.000 0.000 0.000 10 1 no 0.000 0 0 
       1  63 ILE QG 52 no  100.0 100.0 0.400 0.400 0.000  5 1 no 0.000 0 0 
       1  64 TYR QB 43 no  100.0   0.0 0.000 0.000 0.000  6 4 no 0.000 0 0 
       1  65 ASN QB 55 no   35.0 100.0 0.014 0.014 0.000  5 2 no 0.000 0 0 
       1  65 ASN QD 54 no   50.0 100.0 0.040 0.040 0.000  5 2 no 0.000 0 0 
       1  67 PHE QB 37 no   70.0 100.0 0.152 0.152 0.000  6 1 no 0.000 0 0 
       1  68 SER QB 61 no   55.0  84.7 0.004 0.004 0.001  4 1 no 0.088 0 0 
       1  69 PRO QD 69 no  100.0   0.0 0.000 0.000 0.000  3 1 no 0.000 0 0 
       1  69 PRO QG 68 no  100.0   0.0 0.000 0.000 0.000  3 1 no 0.000 0 0 
       1  70 LEU QB 15 no   55.0  99.8 0.201 0.201 0.000 10 3 no 0.080 0 0 
       1  70 LEU QD  2 no   75.0 100.0 0.309 0.309 0.000 24 9 no 0.026 0 0 
       1  71 ASN QB 18 no  100.0   0.0 0.000 0.000 0.000 10 8 no 0.000 0 0 
       1  71 ASN QD 17 no  100.0   0.0 0.000 0.000 0.000 10 5 no 0.000 0 0 
       1  72 PRO QB 42 no  100.0 100.0 0.000 0.000 0.000  6 2 no 0.007 0 0 
       1  72 PRO QD 63 no  100.0   0.0 0.000 0.000 0.000  4 2 no 0.000 0 0 
       1  72 PRO QG 77 no  100.0   0.0 0.000 0.000 0.000  1 0 no 0.000 0 0 
       1  73 VAL QG  6 no   90.0 100.0 1.303 1.303 0.000 17 2 no 0.000 0 0 
       1  74 ARG QG 16 no  100.0   0.0 0.000 0.000 0.000 10 4 no 0.000 0 0 
       1  75 VAL QG  5 no   90.0  99.9 0.093 0.093 0.000 22 6 no 0.045 0 0 
       1  77 ILE QG 33 no    5.0 100.0 0.003 0.003 0.000  6 0 no 0.000 0 0 
       1  78 GLU QB 51 no   40.0 100.0 0.083 0.083 0.000  5 1 no 0.026 0 0 
       1  78 GLU QG 50 no  100.0   0.0 0.000 0.000 0.000  5 1 no 0.000 0 0 
       1  79 ILE QG 45 no   15.0 100.0 0.045 0.045 0.000  5 0 no 0.000 0 0 
       1  80 GLY QA 31 no   90.0  39.1 0.001 0.003 0.002  7 2 no 0.212 0 0 
       1  81 PRO QB 76 no  100.0   0.0 0.000 0.000 0.000  1 0 no 0.000 0 0 
       1  81 PRO QD 41 no  100.0   0.0 0.000 0.000 0.000  6 2 no 0.000 0 0 
       1  82 ASP QB 22 no   25.0 100.0 0.025 0.025 0.000  8 1 no 0.000 0 0 
       1  83 GLY QA 30 no   65.0 100.0 0.025 0.025 0.000  7 1 no 0.000 0 0 
       1  84 ARG QD 57 no   10.0 100.0 0.009 0.009 0.000  4 0 no 0.000 0 0 
       1  85 VAL QG 49 no   40.0 100.0 0.128 0.128 0.000  5 1 no 0.000 0 0 
       1  90 ASP QB 48 no   35.0 100.0 0.021 0.021 0.000  5 1 no 0.000 0 0 
       1  91 VAL QG  7 no  100.0   0.0 0.000 0.000 0.000 16 1 no 0.000 0 0 
       1  92 GLU QB 75 no  100.0   0.0 0.000 0.000 0.000  1 0 no 0.000 0 0 
       1  93 PHE QB 29 no  100.0   0.0 0.000 0.000 0.000  7 1 no 0.000 0 0 
       1  97 GLU QB 56 no  100.0   0.0 0.000 0.000 0.000  4 0 no 0.000 0 0 
       1  97 GLU QG 19 no  100.0   0.0 0.000 0.000 0.000  9 1 no 0.000 0 0 
       1  98 GLU QB 74 no  100.0   0.0 0.000 0.000 0.000  1 0 no 0.000 0 0 
       1 100 VAL QG  1 no  100.0 100.0 0.744 0.744 0.000 24 2 no 0.000 0 0 
       1 103 MET QB 28 no    5.0 100.0 0.015 0.015 0.000  7 1 no 0.000 0 0 
       1 105 LYS QE 32 no   10.0 100.0 0.054 0.054 0.000  7 4 no 0.000 0 0 
       1 105 LYS QG 21 no   90.0 100.0 0.147 0.147 0.000  9 4 no 0.000 0 0 
       1 106 ASP QB 40 no  100.0   0.0 0.000 0.000 0.000  6 2 no 0.000 0 0 
       1 107 ARG QG 44 no  100.0   0.0 0.000 0.000 0.000  5 0 no 0.003 0 0 
       1 110 MET QB 67 no  100.0   0.0 0.000 0.000 0.000  3 1 no 0.000 0 0 
       1 110 MET QG 36 no  100.0  98.6 0.086 0.087 0.001  6 1 no 0.155 0 0 
       1 111 GLN QB 78 no  100.0   0.0 0.000 0.000 0.000  1 1 no 0.000 0 0 
       1 111 GLN QE 47 yes 100.0  97.2 1.052 1.083 0.030  5 1 no 0.254 0 0 
       1 111 GLN QG 12 no  100.0 100.0 0.945 0.945 0.000 11 2 no 0.000 0 0 
       1 112 HIS QB 53 no  100.0 100.0 2.216 2.216 0.000  5 2 no 0.000 0 0 
       1 114 TYR QB 64 no  100.0   0.0 0.000 0.000 0.000  3 0 no 0.000 0 0 
       1 115 ILE QG 73 no  100.0   0.0 0.000 0.000 0.000  1 0 no 0.000 0 0 
       1 117 LEU QB 25 no  100.0   0.0 0.000 0.000 0.000  8 4 no 0.000 0 0 
       1 117 LEU QD  4 no   35.0  87.4 0.001 0.001 0.000 23 4 no 0.044 0 0 
       1 119 LEU QB 39 no   65.0 100.0 0.004 0.004 0.000  6 2 no 0.000 0 0 
       1 119 LEU QD  8 no   80.0  99.0 0.506 0.511 0.005 16 3 no 0.141 0 0 
       1 120 ASN QB 27 no  100.0 100.0 0.096 0.096 0.000  7 1 no 0.000 0 0 
       1 120 ASN QD 72 no    5.0 100.0 0.000 0.000 0.000  1 0 no 0.000 0 0 
       1 124 GLY QA 70 no  100.0   0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1 130 TYR QB 14 no   55.0 100.0 0.276 0.276 0.000 10 3 no 0.000 0 0 
       1 131 SER QB 71 no   60.0 100.0 0.018 0.018 0.000  1 0 no 0.000 0 0 
       1 133 GLN QB 26 no  100.0   0.0 0.000 0.000 0.000  8 5 no 0.000 0 0 
       1 133 GLN QE 24 no  100.0   0.0 0.000 0.000 0.000  8 4 no 0.000 0 0 
       1 134 VAL QG 35 no  100.0   0.0 0.000 0.000 0.000  6 1 no 0.000 0 0 
       1 135 MET QB 60 no   25.0  95.1 0.033 0.035 0.002  4 1 no 0.173 0 0 
       1 135 MET QG 34 no   25.0 100.0 0.001 0.001 0.000  6 1 no 0.000 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Saturday, April 27, 2024 10:48:15 PM GMT (wattos1)