NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
468848 2a7y 7000 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2a7y


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        55
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          25
    _Stereo_assign_list.Total_e_low_states   0.126
    _Stereo_assign_list.Total_e_high_states  3.630
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  4 MET QG 54 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1  5 HIS QB 45 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1  7 LYS QG 44 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.005 0 0 
       1  8 VAL QG 12 no  92.0  91.4 0.065 0.072 0.006 12  4 no 0.468 0 0 
       1  9 GLY QA 31 no 100.0   0.0 0.000 0.000 0.000  6  2 no 0.000 0 0 
       1 11 TYR QB 28 no 100.0   0.0 0.000 0.000 0.000  6  0 no 0.000 0 0 
       1 12 LEU QB 20 no 100.0   0.0 0.000 0.000 0.000  8  2 no 0.000 0 0 
       1 12 LEU QD  7 no  20.0  51.6 0.005 0.009 0.004 16  8 no 0.216 0 0 
       1 13 VAL QG  3 no  40.0  66.4 0.028 0.043 0.014 24  7 no 0.394 0 0 
       1 22 HIS QB 47 no 100.0   0.0 0.000 0.001 0.001  4  2 no 0.126 0 0 
       1 25 HIS QB 29 no 100.0   0.0 0.000 0.000 0.000  6  1 no 0.000 0 0 
       1 28 ILE QG 22 no 100.0   0.0 0.000 0.000 0.000  7  2 no 0.000 0 0 
       1 29 ILE QG 53 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 30 GLU QG 52 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 31 VAL QG  2 no  76.0  97.7 1.010 1.034 0.024 30  4 no 0.501 0 1 
       1 32 ARG QB 43 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 33 SER QB 49 no 100.0   0.0 0.000 0.000 0.000  3  0 no 0.000 0 0 
       1 35 ASP QB 42 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 36 GLY QA 15 no 100.0   0.0 0.000 0.000 0.000  9  2 no 0.004 0 0 
       1 38 PRO QB 41 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 40 TYR QB 14 no 100.0   0.0 0.000 0.000 0.000 10  2 no 0.000 0 0 
       1 42 VAL QG  1 no  96.0  99.2 2.102 2.118 0.017 35  6 no 0.374 0 0 
       1 43 ARG QB 32 no 100.0   0.0 0.000 0.000 0.000  5  0 no 0.000 0 0 
       1 44 TRP QB 27 no 100.0   0.0 0.000 0.000 0.000  6  0 no 0.000 0 0 
       1 45 LEU QB 46 no 100.0   0.0 0.000 0.000 0.000  4  2 no 0.000 0 0 
       1 45 LEU QD  6 no  12.0  81.8 0.078 0.095 0.017 18  6 no 0.445 0 0 
       1 46 VAL QG  5 no   8.0  27.2 0.013 0.048 0.035 18  4 no 0.445 0 0 
       1 47 ASN QB 19 no 100.0   0.0 0.000 0.000 0.000  8  0 no 0.000 0 0 
       1 47 ASN QD 40 no 100.0 100.0 0.183 0.183 0.000  4  0 no 0.019 0 0 
       1 49 HIS QB 26 no 100.0   0.0 0.000 0.000 0.000  6  0 no 0.020 0 0 
       1 50 GLU QB 39 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 50 GLU QG  9 no 100.0   0.0 0.000 0.000 0.000 14  0 no 0.005 0 0 
       1 54 TYR QB 38 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 55 PRO QB 10 no 100.0   0.0 0.000 0.004 0.004 12  2 no 0.216 0 0 
       1 55 PRO QD 13 no 100.0   0.0 0.000 0.000 0.000 12  8 no 0.000 0 0 
       1 55 PRO QG  8 no 100.0   0.0 0.000 0.000 0.000 15 10 no 0.000 0 0 
       1 56 GLY QA 37 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 57 SER QB 36 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 58 ASP QB 25 no 100.0   0.0 0.000 0.000 0.000  6  0 no 0.000 0 0 
       1 60 VAL QG 30 no 100.0   0.0 0.000 0.000 0.000  6  2 no 0.000 0 0 
       1 62 VAL QG  4 no  96.0  69.7 0.006 0.008 0.003 21  6 no 0.209 0 0 
       1 66 GLU QG 24 no 100.0   0.0 0.000 0.000 0.000  6  0 no 0.009 0 0 
       1 67 HIS QB 11 no 100.0   0.0 0.000 0.000 0.000 12  4 no 0.008 0 0 
       1 69 GLU QB 23 no 100.0   0.0 0.000 0.000 0.000  6  0 no 0.000 0 0 
       1 69 GLU QG 55 no 100.0   0.0 0.000 0.000 0.000  1  0 no 0.000 0 0 
       1 71 GLU QB 51 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 71 GLU QG 35 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 72 LYS QB 18 no 100.0   0.0 0.000 0.000 0.000  8  0 no 0.000 0 0 
       1 72 LYS QD 21 no 100.0   0.0 0.000 0.000 0.000  8  4 no 0.003 0 0 
       1 72 LYS QE 48 no 100.0   0.0 0.000 0.000 0.000  4  4 no 0.000 0 0 
       1 73 ARG QB 17 no 100.0   0.0 0.000 0.000 0.000  8  0 no 0.000 0 0 
       1 73 ARG QD 34 no  12.0  99.1 0.015 0.015 0.000  4  0 no 0.057 0 0 
       1 73 ARG QG 50 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 77 ARG QD 33 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 79 GLY QA 16 no 100.0   0.0 0.000 0.000 0.000  8  0 no 0.027 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Monday, May 20, 2024 1:06:28 PM GMT (wattos1)