NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
467591 2kys 16981 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2kys


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        104
    _Stereo_assign_list.Swap_count           31
    _Stereo_assign_list.Swap_percentage      29.8
    _Stereo_assign_list.Deassign_count       40
    _Stereo_assign_list.Deassign_percentage  38.5
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   233.667
    _Stereo_assign_list.Total_e_high_states  519.405
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  1 GLY QA 103 no   65.0  39.8  0.074  0.185  0.112  2  2 no  0.000   0   0 
       1  2 HIS QB 102 no   30.0  21.2  0.050  0.235  0.185  2  2 yes 1.019   1   6 
       1  5 MET QB  99 no   90.0  94.0  0.324  0.344  0.021  3  0 no  0.508   0   1 
       1  5 MET QG  68 no   90.0  74.3  0.693  0.933  0.240 11  0 yes 1.281   3   4 
       1  6 SER QB  85 yes 100.0  89.9  2.154  2.395  0.241  8  4 no  0.549   0   1 
       1  7 ASP QB  32 no  100.0  41.6  2.139  5.145  3.006 17  4 no  0.361   0   0 
       1  8 VAL QG  14 no   60.0  46.2  6.520 14.121  7.601 28 10 yes 2.394  94 154 
       1  9 LYS QB 100 yes  80.0  72.5  0.245  0.338  0.093  2  0 no  0.687   0   4 
       1  9 LYS QG  75 no   75.0  71.9  3.046  4.234  1.188 10  1 yes 1.631   5  10 
       1 10 CYS QB  28 no   65.0  16.5  0.675  4.104  3.429 20 10 yes 1.621   9  20 
       1 12 SER QB  47 yes  90.0  89.7  1.774  1.979  0.204 14  3 yes 1.239   2   4 
       1 13 VAL QG  35 yes 100.0  84.1  2.527  3.003  0.477 16  2 no  0.594   0   1 
       1 14 VAL QG   7 no   70.0  58.9 11.464 19.473  8.010 33 18 yes 2.640  40  52 
       1 15 LEU QB  84 no   95.0  91.3  2.135  2.338  0.203  8  4 no  0.584   0   1 
       1 15 LEU QD   5 yes  75.0  46.7  5.066 10.840  5.773 39 19 yes 3.447  12  38 
       1 16 LEU QB  18 yes 100.0  79.7  4.434  5.566  1.132 25 11 yes 1.614   5   8 
       1 16 LEU QD  11 no   60.0  17.6  1.907 10.836  8.930 32 18 yes 2.106  47  75 
       1 18 VAL QG   8 yes  95.0  89.1  7.523  8.441  0.918 32  7 yes 1.284   2   6 
       1 19 LEU QB  65 no  100.0  81.9  1.535  1.874  0.338 12  5 no  0.223   0   0 
       1 19 LEU QD   1 no   65.0  33.7 10.038 29.831 19.792 47 22 yes 3.644 110 161 
       1 20 GLN QB  78 no   60.0  86.3  0.483  0.559  0.077 10  4 yes 0.943   0  21 
       1 20 GLN QE  46 yes 100.0  99.9  1.071  1.073  0.001 15  9 no  0.038   0   0 
       1 20 GLN QG  61 no   60.0  38.2  0.843  2.208  1.365 12  2 yes 1.331   5  18 
       1 21 GLN QB  63 no   65.0   4.6  0.076  1.655  1.579 12  3 no  0.306   0   0 
       1 21 GLN QG  76 no   85.0  19.4  0.308  1.587  1.280 10  2 no  0.942   0   2 
       1 22 LEU QB 101 no  100.0  99.0  0.022  0.022  0.000  2  1 no  0.068   0   0 
       1 22 LEU QD  12 yes  90.0  80.1 13.176 16.446  3.270 30 11 yes 2.056   8  14 
       1 23 ARG QB  93 no   65.0  61.6  0.077  0.125  0.048  6  3 no  0.552   0   4 
       1 23 ARG QD  48 no   60.0  14.1  0.191  1.356  1.165 14  4 no  0.805   0   9 
       1 24 VAL QG   2 yes  80.0  76.5 15.452 20.198  4.746 46 19 yes 2.089  27  58 
       1 25 GLU QB  66 no   20.0   1.0  0.003  0.284  0.281 12  6 no  0.370   0   0 
       1 25 GLU QG  64 yes  95.0  93.5  0.417  0.446  0.029 12  4 no  0.087   0   0 
       1 27 SER QB  98 yes  80.0  57.1  0.104  0.182  0.078  3  0 no  0.905   0   3 
       1 28 SER QB  39 no   75.0  16.9  0.233  1.381  1.148 16  7 yes 1.209   3   6 
       1 29 LYS QG  44 yes  90.0  84.7  1.632  1.927  0.295 15  5 no  0.972   0   3 
       1 30 LEU QD   6 no   95.0  82.8 21.245 25.664  4.418 38 19 yes 2.566  10  20 
       1 31 TRP QB  53 yes 100.0  69.4  0.366  0.528  0.162 13  2 no  0.055   0   0 
       1 33 GLN QE  25 no   95.0  48.1  2.736  5.686  2.951 22 13 no  0.503   0   1 
       1 33 GLN QG  17 yes 100.0  96.6  2.440  2.525  0.085 26 12 no  0.104   0   0 
       1 34 CYS QB  59 yes 100.0  53.4  0.677  1.269  0.592 13  7 no  0.091   0   0 
       1 35 VAL QG   3 no   80.0  88.5 12.810 14.481  1.671 44 13 yes 1.935   8  26 
       1 36 GLN QE  55 no   90.0  50.5  4.656  9.223  4.567 13  5 no  0.074   0   0 
       1 37 LEU QB  49 no  100.0  56.8  1.919  3.378  1.459 14  5 no  0.085   0   0 
       1 37 LEU QD  21 no   35.0   0.1  0.005  8.240  8.235 23 17 yes 2.380  57  95 
       1 38 HIS QB  73 no  100.0  83.7  2.600  3.108  0.508 11  5 no  0.074   0   0 
       1 39 ASN QB  77 no   55.0  42.5  0.379  0.893  0.514 10  4 no  0.781   0   5 
       1 39 ASN QD  26 no   65.0  60.9  1.683  2.763  1.080 20  5 yes 1.679  13  21 
       1 40 ASP QB  23 no  100.0  91.2  5.053  5.538  0.485 22  9 no  0.712   0   1 
       1 42 LEU QB  56 no  100.0  84.4  3.057  3.622  0.565 13  6 no  0.075   0   0 
       1 42 LEU QD  13 no   70.0  63.6 15.355 24.145  8.791 29 12 yes 2.912  59  81 
       1 43 LEU QD  54 no   65.0  34.4  2.639  7.670  5.030 13  5 yes 2.519  53  70 
       1 45 LYS QG  52 yes  80.0  78.1  0.681  0.872  0.191 13  0 yes 1.411   2   2 
       1 46 ASP QB  31 yes 100.0  98.5  0.994  1.008  0.015 17  3 no  0.124   0   0 
       1 49 GLU QB  41 no  100.0  99.5  0.446  0.448  0.002 15  3 no  0.110   0   0 
       1 51 PHE QB  81 yes 100.0  99.9  0.805  0.806  0.000  8  1 no  0.071   0   0 
       1 52 GLU QB  86 yes 100.0  99.6  0.728  0.731  0.003  7  0 no  0.086   0   0 
       1 52 GLU QG  60 yes  95.0  99.3  0.875  0.882  0.006 12  0 no  0.097   0   0 
       1 53 LYS QB  92 no   60.0  89.1  0.069  0.077  0.008  6  3 no  0.309   0   0 
       1 53 LYS QD  58 no  100.0  68.0  1.657  2.439  0.782 13  7 no  0.309   0   0 
       1 53 LYS QE  87 no   65.0  31.0  0.495  1.598  1.103  7  3 yes 1.266   2   5 
       1 53 LYS QG  36 no   80.0  14.0  0.250  1.780  1.530 16  4 yes 1.735   6  13 
       1 54 MET QB  69 no   60.0   1.9  0.069  3.710  3.641 11  2 no  0.350   0   0 
       1 55 VAL QG  20 no   60.0  76.5 13.115 17.133  4.018 24  6 yes 2.294  82 116 
       1 56 SER QB  89 yes  90.0  82.8  0.620  0.749  0.129  6  1 yes 1.176   1   1 
       1 57 LEU QB  90 no   65.0  33.8  0.654  1.933  1.279  6  2 no  0.334   0   0 
       1 57 LEU QD  16 no   55.0  19.0  3.987 21.012 17.025 26 12 yes 2.644  97 131 
       1 58 LEU QB  83 no   70.0  65.7  2.427  3.694  1.267  8  3 no  0.352   0   0 
       1 58 LEU QD  15 no   60.0  23.7  2.774 11.711  8.938 27  8 yes 3.629  62  78 
       1 60 VAL QG  29 no   60.0  44.6  4.592 10.300  5.708 19  8 yes 2.445  26  40 
       1 61 LEU QB  94 no   95.0  73.4  0.780  1.062  0.282  6  4 yes 1.133   1   1 
       1 61 LEU QD  10 no   50.0   4.3  0.518 12.042 11.524 32 18 yes 2.487  65 105 
       1 62 LEU QB  62 yes 100.0  99.7  3.355  3.366  0.011 12  3 no  0.100   0   0 
       1 62 LEU QD   9 no   65.0  50.2  5.882 11.726  5.844 32 11 yes 2.816  31  58 
       1 64 MET QB 104 no  100.0 100.0  0.347  0.347  0.000  1  0 no  0.019   0   0 
       1 64 MET QG  27 yes 100.0  71.8  3.348  4.665  1.317 20  9 no  0.094   0   0 
       1 65 GLN QB  57 no   15.0  26.5  0.028  0.107  0.079 13  7 no  0.326   0   0 
       1 65 GLN QE  22 no   95.0  54.2  4.908  9.055  4.147 23 18 yes 1.270   1   2 
       1 65 GLN QG  72 no   95.0  42.4  0.700  1.650  0.950 11  5 no  0.000   0   0 
       1 66 GLY QA  71 yes 100.0  70.0  0.242  0.345  0.103 11  4 no  0.049   0   0 
       1 68 VAL QG  38 no   85.0  72.5 11.514 15.879  4.366 16  7 yes 2.935  22  30 
       1 69 ASP QB  34 no  100.0  78.6  0.464  0.591  0.126 17  7 no  0.916   0   3 
       1 71 ASN QD  74 yes 100.0  94.3  2.268  2.405  0.137 10  1 no  0.086   0   0 
       1 72 ARG QB  67 no  100.0  65.7  1.280  1.950  0.669 12  7 no  0.092   0   0 
       1 72 ARG QD  45 no   90.0  18.2  0.739  4.058  3.319 15  6 no  0.092   0   0 
       1 72 ARG QG  79 no   70.0  18.9  0.288  1.524  1.236  9  1 no  0.532   0   1 
       1 73 LEU QB  88 no   65.0  87.5  0.181  0.207  0.026  7  5 no  0.000   0   0 
       1 73 LEU QD  24 no   90.0  87.5 11.459 13.092  1.633 22 12 yes 2.664   8  14 
       1 74 CYS QB  43 no   90.0  31.1  0.838  2.696  1.858 15  5 no  0.742   0   1 
       1 75 GLU QG  70 no  100.0  45.4  2.478  5.458  2.980 11  4 no  0.742   0   1 
       1 76 GLU QB  91 no   95.0  75.9  0.165  0.218  0.052  6  3 no  0.502   0   1 
       1 76 GLU QG  80 no   90.0  57.1  0.012  0.020  0.009  9  7 no  0.321   0   0 
       1 77 MET QB  96 no  100.0   0.0  0.000  0.000  0.000  4  0 no  0.000   0   0 
       1 77 MET QG  30 no   95.0  99.3  0.143  0.144  0.001 17  3 no  0.000   0   0 
       1 78 LEU QB  50 yes 100.0  99.9  0.568  0.569  0.001 14  6 no  0.067   0   0 
       1 78 LEU QD   4 no   55.0  20.9  4.912 23.496 18.584 39 16 yes 3.255  87 114 
       1 79 ASP QB  33 yes 100.0  80.2  4.731  5.899  1.168 17  6 no  0.090   0   0 
       1 80 ASN QD  40 yes 100.0  98.5  1.117  1.134  0.017 16  9 no  0.321   0   0 
       1 81 ARG QB  37 no   95.0  18.5  0.913  4.940  4.027 16  7 no  0.087   0   0 
       1 81 ARG QD  19 no   60.0   4.2  0.179  4.282  4.102 24  6 yes 1.112   7  14 
       1 81 ARG QG  51 yes 100.0  96.5  0.334  0.346  0.012 13  0 no  0.108   0   0 
       1 84 LEU QB  82 yes 100.0  99.8  0.906  0.908  0.002  8  3 no  0.107   0   0 
       1 84 LEU QD  42 no   75.0  89.4  7.932  8.872  0.940 15  4 yes 1.239  11  17 
       1 85 GLN QB  95 no   70.0  26.0  0.020  0.079  0.058  5  1 no  0.452   0   0 
       1 85 GLN QE  97 no   50.0  92.8  0.922  0.993  0.071  4  2 no  0.569   0   2 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Sunday, May 19, 2024 7:15:40 AM GMT (wattos1)