NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
454397 2yuq 10211 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2yuq


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        87
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.000
    _Stereo_assign_list.Total_e_high_states  223.525
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1 11 ARG QB 56 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1 12 ARG QB 60 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.000 0 0 
       1 13 PRO QB 85 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 13 PRO QD 39 no 100.0 100.0  0.927  0.927 0.000 10  4 no 0.000 0 0 
       1 14 LEU QB 50 no 100.0   0.0  0.000  0.000 0.000  8  4 no 0.002 0 0 
       1 14 LEU QD 38 no 100.0   0.0  0.000  0.000 0.000 10  4 no 0.033 0 0 
       1 15 TRP QB 47 no 100.0   0.0  0.000  0.000 0.000  8  2 no 0.003 0 0 
       1 16 GLU QB 87 no 100.0   0.0  0.000  0.000 0.000  2  2 no 0.000 0 0 
       1 16 GLU QG 49 no 100.0   0.0  0.000  0.000 0.000  8  4 no 0.000 0 0 
       1 17 PRO QD 26 no 100.0 100.0  0.978  0.978 0.000 13  6 no 0.000 0 0 
       1 18 GLU QB 70 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 21 VAL QG  4 no 100.0 100.0 14.661 14.661 0.000 32  4 no 0.000 0 0 
       1 22 VAL QG  1 no 100.0 100.0 54.136 54.136 0.000 36  9 no 0.000 0 0 
       1 23 ILE QG 37 no 100.0   0.0  0.000  0.000 0.000 10  4 no 0.000 0 0 
       1 25 LEU QB 19 no 100.0 100.0  1.023  1.023 0.000 14  3 no 0.000 0 0 
       1 25 LEU QD 12 no 100.0 100.0 10.449 10.449 0.000 19  3 no 0.001 0 0 
       1 26 TYR QB 52 no 100.0 100.0  0.462  0.462 0.000  7  0 no 0.000 0 0 
       1 27 ASP QB 69 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.009 0 0 
       1 28 TYR QB  7 no 100.0 100.0  2.080  2.080 0.000 24  7 no 0.003 0 0 
       1 29 GLN QB 84 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 32 ASP QB 68 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.045 0 0 
       1 33 PRO QD 55 no 100.0 100.0  0.453  0.453 0.000  6  0 no 0.000 0 0 
       1 34 GLN QB 67 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 35 GLU QB 29 no 100.0 100.0  1.642  1.642 0.000 12  0 no 0.000 0 0 
       1 35 GLU QG 54 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.003 0 0 
       1 36 LEU QB 30 no 100.0 100.0  0.612  0.612 0.000 12  7 no 0.000 0 0 
       1 36 LEU QD  3 no 100.0 100.0  4.965  4.965 0.000 34  9 no 0.002 0 0 
       1 38 LEU QB  8 no 100.0 100.0  1.756  1.756 0.000 23  8 no 0.001 0 0 
       1 38 LEU QD 14 no 100.0   0.0  0.000  0.000 0.000 16  4 no 0.000 0 0 
       1 39 ARG QB 16 no 100.0 100.0  1.473  1.473 0.000 15  2 no 0.000 0 0 
       1 39 ARG QG 66 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 40 ARG QB 46 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.000 0 0 
       1 40 ARG QD 83 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 40 ARG QG 25 no 100.0 100.0  2.521  2.521 0.000 13  4 no 0.000 0 0 
       1 41 ASN QB 71 no 100.0   0.0  0.000  0.000 0.000  4  2 no 0.000 0 0 
       1 41 ASN QD 86 no 100.0   0.0  0.000  0.000 0.000  2  2 no 0.000 0 0 
       1 42 GLU QB 82 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.002 0 0 
       1 42 GLU QG 58 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.053 0 0 
       1 43 GLU QG 21 no 100.0   0.0  0.000  0.000 0.000 14  6 no 0.000 0 0 
       1 44 TYR QB 15 no 100.0 100.0  0.854  0.854 0.000 16  7 no 0.000 0 0 
       1 45 CYS QB 81 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 46 LEU QB 51 no 100.0   0.0  0.000  0.000 0.000  8  6 no 0.000 0 0 
       1 46 LEU QD 10 no 100.0   0.0  0.000  0.000 0.000 20 10 no 0.000 0 0 
       1 47 LEU QB 80 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 47 LEU QD 11 no 100.0   0.0  0.000  0.000 0.000 20 12 no 0.000 0 0 
       1 49 SER QB 48 no 100.0   0.0  0.000  0.000 0.000  8  4 no 0.000 0 0 
       1 51 GLU QB 79 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 51 GLU QG 78 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 52 ILE QG 45 no 100.0 100.0  0.315  0.315 0.000  8  0 no 0.004 0 0 
       1 53 HIS QB 65 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 54 TRP QB 40 no 100.0 100.0  1.287  1.287 0.000  9  0 no 0.001 0 0 
       1 55 TRP QB 18 no 100.0 100.0  1.930  1.930 0.000 15  8 no 0.000 0 0 
       1 56 ARG QB 44 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.000 0 0 
       1 56 ARG QG 34 no 100.0 100.0  2.134  2.134 0.000 10  1 no 0.000 0 0 
       1 57 VAL QG  5 no 100.0 100.0 18.049 18.049 0.000 32  6 no 0.003 0 0 
       1 58 GLN QB 31 no 100.0   0.0  0.000  0.000 0.000 12  8 no 0.000 0 0 
       1 58 GLN QE 32 no 100.0   0.0  0.000  0.000 0.000 12 12 no 0.000 0 0 
       1 58 GLN QG 22 no 100.0   0.0  0.000  0.000 0.000 14  8 no 0.000 0 0 
       1 59 ASP QB 36 no 100.0   0.0  0.000  0.000 0.000 10  4 no 0.000 0 0 
       1 61 ASN QB 43 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.000 0 0 
       1 61 ASN QD 64 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 62 GLY QA 72 no 100.0   0.0  0.000  0.000 0.000  4  4 no 0.000 0 0 
       1 63 HIS QB 57 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.000 0 0 
       1 64 GLU QB 53 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.001 0 0 
       1 64 GLU QG 59 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.000 0 0 
       1 65 GLY QA 27 no 100.0 100.0  0.694  0.694 0.000 13  7 no 0.000 0 0 
       1 66 TYR QB 42 no 100.0 100.0  1.146  1.146 0.000  8  0 no 0.000 0 0 
       1 67 VAL QG  6 no 100.0 100.0 35.715 35.715 0.000 30 10 no 0.000 0 0 
       1 68 PRO QB 24 no 100.0 100.0  2.709  2.709 0.000 13  2 no 0.000 0 0 
       1 68 PRO QD 17 no 100.0 100.0  2.256  2.256 0.000 15  5 no 0.000 0 0 
       1 68 PRO QG 20 no 100.0 100.0  2.356  2.356 0.000 14  4 no 0.001 0 0 
       1 69 SER QB 23 no 100.0 100.0  4.322  4.322 0.000 13  2 no 0.001 0 0 
       1 70 SER QB 63 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 71 TYR QB  9 no 100.0 100.0  4.664  4.664 0.000 22  8 no 0.000 0 0 
       1 72 LEU QB 13 no 100.0 100.0  2.002  2.002 0.000 17  5 no 0.000 0 0 
       1 72 LEU QD  2 no 100.0 100.0 42.432 42.432 0.000 35 11 no 0.001 0 0 
       1 73 VAL QG 33 no 100.0   0.0  0.000  0.000 0.000 10  0 no 0.000 0 0 
       1 74 GLU QB 41 no 100.0 100.0  2.521  2.521 0.000  9  2 no 0.001 0 0 
       1 74 GLU QG 35 no 100.0   0.0  0.000  0.000 0.000 10  2 no 0.000 0 0 
       1 75 LYS QB 28 no 100.0   0.0  0.000  0.000 0.000 12  0 no 0.000 0 0 
       1 77 PRO QD 77 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 80 LEU QB 62 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 80 LEU QD 76 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 81 GLU QB 75 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 84 GLU QB 61 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 84 GLU QG 74 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 85 TRP QB 73 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Sunday, May 19, 2024 8:05:16 PM GMT (wattos1)