NMR Restraints Grid

Result table
(Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype

441370 2kav 16032 cing 4-filtered-FRED Wattos check stereo assignment distance

data_2kav


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        16
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          15
    _Stereo_assign_list.Total_e_low_states   0.004
    _Stereo_assign_list.Total_e_high_states  18.337
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  28 VAL QG 15 no  40.0  99.8 0.186 0.186 0.000  9 0 no 0.042 0 0 
       1  37 LEU QD  9 no  73.3 100.0 0.229 0.229 0.000 18 2 no 0.000 0 0 
       1  48 VAL QG  1 no 100.0 100.0 2.147 2.147 0.000 40 2 no 0.000 0 0 
       1  65 LEU QD  4 no 100.0 100.0 3.600 3.600 0.000 31 2 no 0.000 0 0 
       1  72 LEU QD  2 no 100.0 100.0 4.210 4.210 0.000 37 2 no 0.000 0 0 
       1  76 LEU QD 10 no 100.0 100.0 1.676 1.676 0.000 17 1 no 0.000 0 0 
       1  77 LEU QD  6 no 100.0 100.0 1.583 1.583 0.000 26 0 no 0.000 0 0 
       1  84 VAL QG 12 no 100.0 100.0 0.172 0.172 0.000 13 0 no 0.000 0 0 
       1  86 LEU QD  3 no 100.0 100.0 0.820 0.820 0.000 32 2 no 0.000 0 0 
       1  91 LEU QD  8 no  93.3  99.8 0.935 0.937 0.002 22 0 no 0.156 0 0 
       1  94 VAL QG  7 no 100.0  99.9 1.146 1.147 0.001 24 0 no 0.064 0 0 
       1 102 LEU QD 13 no 100.0 100.0 0.607 0.607 0.000 11 0 no 0.036 0 0 
       1 105 LEU QD  5 no 100.0 100.0 0.914 0.914 0.000 27 2 no 0.000 0 0 
       1 112 VAL QG 11 no  86.7  97.6 0.020 0.020 0.000 15 1 no 0.071 0 0 
       1 113 LEU QD 16 no  26.7  99.7 0.090 0.090 0.000  6 0 no 0.065 0 0 
       1 122 LEU QD 14 no 100.0   0.0 0.000 0.000 0.000 10 0 no 0.013 0 0 
    stop_

save_

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Contact the webmaster for help, if required. Thursday, May 23, 2024 1:20:23 PM GMT (wattos1)

image	mrblock_id	pdb_id	bmrb_id	cing	stage	program	type	subtype	subsubtype
	441370	2kav	16032	cing	4-filtered-FRED	Wattos	check	stereo assignment	distance