NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
415588 2dbm 10302 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2dbm


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        67
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.001
    _Stereo_assign_list.Total_e_high_states  100.840
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  7 GLY QA 55 no 100.0   0.0  0.000  0.000 0.000  4  4 no 0.072 0 0 
       1  8 PRO QB  8 no 100.0 100.0  2.032  2.032 0.000 15  8 no 0.000 0 0 
       1  8 PRO QD 54 no 100.0   0.0  0.000  0.000 0.000  4  4 no 0.072 0 0 
       1  8 PRO QG 39 no 100.0 100.0  1.147  1.147 0.000  6  3 no 0.000 0 0 
       1  9 CYS QB 36 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.001 0 0 
       1 10 CYS QB 18 no 100.0   0.0  0.000  0.000 0.000 10  2 no 0.000 0 0 
       1 11 ARG QB 52 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.001 0 0 
       1 11 ARG QD 67 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.002 0 0 
       1 13 LEU QB 51 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 13 LEU QD 12 no 100.0   0.0  0.000  0.000 0.000 12  4 no 0.000 0 0 
       1 14 TYR QB 35 no 100.0 100.0  1.262  1.262 0.000  6  0 no 0.001 0 0 
       1 15 ASP QB 66 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 16 PHE QB 17 no 100.0   0.0  0.000  0.000 0.000 10  0 no 0.007 0 0 
       1 18 PRO QG 65 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.012 0 0 
       1 19 GLU QG 64 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 20 ASN QB 50 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 20 ASN QD 63 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.004 0 0 
       1 23 GLU QB 49 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 23 GLU QG 62 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 24 LEU QB 34 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1 24 LEU QD 22 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.000 0 0 
       1 25 GLY QA 48 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.004 0 0 
       1 26 PHE QB 38 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.000 0 0 
       1 27 LYS QD 47 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.001 0 0 
       1 28 GLU QB 46 no 100.0 100.0  0.871  0.871 0.000  4  0 no 0.000 0 0 
       1 28 GLU QG 33 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1 30 ASP QB  7 no 100.0 100.0  1.190  1.190 0.000 15  4 no 0.001 0 0 
       1 31 ILE QG 61 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 32 ILE QG 45 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 34 LEU QB 14 no 100.0 100.0  0.805  0.805 0.000 12  9 no 0.000 0 0 
       1 34 LEU QD  2 no 100.0 100.0 19.729 19.729 0.000 28  8 no 0.003 0 0 
       1 36 ASN QB 26 no 100.0   0.0  0.000  0.000 0.000  8  4 no 0.000 0 0 
       1 37 GLN QB 37 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.000 0 0 
       1 37 GLN QE 32 no 100.0 100.0  0.782  0.782 0.000  6  0 no 0.001 0 0 
       1 37 GLN QG 44 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 38 ILE QG 31 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.010 0 0 
       1 39 ASP QB 60 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.007 0 0 
       1 40 GLU QB 59 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 41 ASN QB 21 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.000 0 0 
       1 42 TRP QB 10 no 100.0 100.0  1.665  1.665 0.000 12  0 no 0.010 0 0 
       1 43 TYR QB 23 no 100.0   0.0  0.000  0.000 0.000  8  2 no 0.000 0 0 
       1 44 GLU QB 25 no 100.0   0.0  0.000  0.000 0.000  8  4 no 0.000 0 0 
       1 44 GLU QG 58 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 45 GLY QA  9 no 100.0 100.0  1.367  1.367 0.000 13  1 no 0.010 0 0 
       1 46 MET QB 29 no 100.0 100.0  1.688  1.688 0.000  7  0 no 0.008 0 0 
       1 46 MET QG 11 no 100.0 100.0  2.775  2.775 0.000 12  4 no 0.000 0 0 
       1 47 LEU QB 41 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.000 0 0 
       1 47 LEU QD  3 no 100.0 100.0  7.090  7.090 0.000 28 10 no 0.009 0 0 
       1 50 HIS QB 43 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 51 SER QB 24 no 100.0   0.0  0.000  0.000 0.000  8  4 no 0.000 0 0 
       1 53 PHE QB 20 no 100.0 100.0  1.109  1.109 0.000  8  0 no 0.003 0 0 
       1 54 PHE QB 19 no 100.0 100.0  0.834  0.834 0.000  9  3 no 0.000 0 0 
       1 55 PRO QB 42 no 100.0 100.0  1.018  1.018 0.000  5  0 no 0.001 0 0 
       1 55 PRO QD  5 no 100.0 100.0  0.985  0.985 0.000 17  3 no 0.001 0 0 
       1 55 PRO QG 28 no 100.0 100.0  2.038  2.038 0.000  7  0 no 0.001 0 0 
       1 56 ILE QG 30 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1 57 ASN QB 57 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 58 TYR QB 53 no 100.0   0.0  0.000  0.000 0.000  4  2 no 0.000 0 0 
       1 59 VAL QG  1 no 100.0 100.0 21.224 21.224 0.000 35  4 no 0.005 0 0 
       1 60 GLU QG 40 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.000 0 0 
       1 61 ILE QG 56 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 62 LEU QB 16 no 100.0 100.0  2.604  2.604 0.000 11  6 no 0.000 0 0 
       1 62 LEU QD  6 no 100.0 100.0  2.179  2.179 0.000 16  4 no 0.002 0 0 
       1 63 VAL QG 15 no 100.0 100.0  8.940  8.940 0.000 11  3 no 0.000 0 0 
       1 65 LEU QB 13 no 100.0 100.0  0.623  0.623 0.000 12  8 no 0.000 0 0 
       1 65 LEU QD  4 no 100.0 100.0 16.881 16.881 0.000 28 14 no 0.000 0 0 
       1 66 PRO QD 27 no 100.0   0.0  0.000  0.000 0.000  8  6 no 0.000 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Wednesday, May 15, 2024 6:46:31 PM GMT (wattos1)