NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
405754 1x6d 10242 cing 4-filtered-FRED Wattos check stereo assignment distance


data_1x6d


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        124
    _Stereo_assign_list.Swap_count           33
    _Stereo_assign_list.Swap_percentage      26.6
    _Stereo_assign_list.Deassign_count       19
    _Stereo_assign_list.Deassign_percentage  15.3
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   22.679
    _Stereo_assign_list.Total_e_high_states  357.167
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  10 LEU QD 105 no   60.0   7.0  0.001  0.018 0.017  3  0 no  0.439 0  0 
       1  13 LEU QB 104 no   95.0  97.1  0.565  0.582 0.017  3  0 no  0.568 0  1 
       1  13 LEU QD 103 no   85.0  46.8  0.237  0.507 0.270  3  0 yes 1.490 3  4 
       1  15 GLY QA 101 no   95.0  31.5  0.085  0.271 0.186  4  2 no  0.408 0  0 
       1  16 ILE QG  44 no   95.0  95.7  4.148  4.334 0.186  9  2 yes 1.357 2  3 
       1  18 VAL QG  43 no   85.0  77.2  3.535  4.577 1.042  9  1 yes 2.023 6 10 
       1  20 ILE QG  50 no  100.0  82.0  1.789  2.181 0.392  8  1 no  0.021 0  0 
       1  21 LEU QB  62 no   45.0  13.8  0.004  0.028 0.024  7  2 no  0.264 0  0 
       1  21 LEU QD  11 no  100.0  99.8 14.699 14.725 0.026 15  4 no  0.264 0  0 
       1  22 HIS QB  88 no  100.0  98.5  0.020  0.021 0.000  5  0 no  0.193 0  0 
       1  23 LYS QB  80 yes 100.0  99.9  0.495  0.496 0.000  6  2 no  0.069 0  0 
       1  23 LYS QE  66 yes  80.0  99.8  0.591  0.592 0.001  7  3 no  0.086 0  0 
       1  23 LYS QG  48 yes 100.0  99.9  1.221  1.222 0.001  8  0 no  0.067 0  0 
       1  24 GLU QB  47 yes  90.0  68.9  0.179  0.260 0.081  8  0 no  0.694 0  3 
       1  24 GLU QG  73 yes  85.0  84.7  0.791  0.934 0.143  6  0 no  0.918 0  5 
       1  25 GLU QG  52 yes  85.0  75.6  2.241  2.964 0.723  8  3 no  0.865 0  7 
       1  26 GLY QA 115 yes 100.0  99.5  0.154  0.154 0.001  2  0 no  0.101 0  0 
       1  28 GLY QA  87 no   20.0  11.0  0.008  0.074 0.066  5  0 no  0.869 0  2 
       1  29 LEU QB  20 no   75.0  98.4  0.020  0.021 0.000 12  2 no  0.388 0  0 
       1  29 LEU QD   5 no  100.0  95.1 11.736 12.338 0.602 24  6 no  0.157 0  0 
       1  30 GLY QA  61 yes 100.0 100.0  0.445  0.445 0.000  7  2 no  0.000 0  0 
       1  31 PHE QB  12 no  100.0  99.8  0.431  0.432 0.001 15  7 no  0.048 0  0 
       1  32 SER QB  86 no   85.0   5.7  0.003  0.048 0.045  5  0 no  0.556 0  1 
       1  33 LEU QB  37 yes 100.0  99.9  3.594  3.598 0.004 10  3 no  0.098 0  0 
       1  33 LEU QD   7 no  100.0 100.0 32.382 32.385 0.003 19  4 no  0.057 0  0 
       1  35 GLY QA  84 no   55.0  93.3  0.430  0.461 0.031  6  6 no  0.506 0  1 
       1  36 GLY QA  60 yes 100.0  99.3  0.155  0.157 0.001  7  2 no  0.114 0  0 
       1  38 ASP QB  59 yes 100.0 100.0  0.117  0.117 0.000  7  2 no  0.000 0  0 
       1  39 LEU QB  27 no   70.0  95.8  0.355  0.370 0.015 11  5 no  0.506 0  1 
       1  39 LEU QD   4 no  100.0  98.9 11.467 11.591 0.124 25 13 no  0.388 0  0 
       1  41 ASN QB  54 no   65.0  29.7  0.005  0.018 0.012  8  4 no  0.240 0  0 
       1  41 ASN QD  68 yes  85.0  84.6  0.447  0.529 0.082  7  4 yes 1.023 1  2 
       1  42 LYS QB  75 no   45.0   7.5  0.099  1.332 1.233  6  1 yes 1.284 5 15 
       1  42 LYS QD  46 no   65.0  10.3  0.083  0.799 0.716  8  0 yes 1.690 4 16 
       1  42 LYS QE 114 no   65.0  46.4  0.004  0.008 0.004  2  0 no  0.213 0  0 
       1  43 VAL QG  25 no   80.0  78.5  5.821  7.411 1.591 11  3 yes 2.242 8 30 
       1  46 VAL QG   1 no  100.0  99.9 51.227 51.253 0.026 45 11 no  0.373 0  0 
       1  47 HIS QB  30 yes  95.0  90.7  0.147  0.162 0.015 10  0 no  0.537 0  1 
       1  48 ARG QB  29 yes 100.0  99.8  0.580  0.581 0.001 10  0 no  0.120 0  0 
       1  48 ARG QG  72 no   60.0 100.0  0.150  0.150 0.000  6  0 no  0.000 0  0 
       1  49 VAL QG   2 no  100.0 100.0 39.937 39.951 0.015 37  9 no  0.133 0  0 
       1  50 PHE QB  41 yes 100.0  45.8  0.326  0.712 0.386 10  6 no  0.082 0  0 
       1  51 PRO QB 108 yes 100.0 100.0  0.941  0.941 0.000  3  2 no  0.000 0  0 
       1  51 PRO QD  67 no    5.0 100.0  0.000  0.000 0.000  7  4 no  0.000 0  0 
       1  51 PRO QG 124 no  100.0  96.9  0.194  0.200 0.006  1  0 no  0.087 0  0 
       1  52 ASN QD  93 no   45.0   0.6  0.006  0.947 0.941  5  2 no  0.000 0  0 
       1  53 GLY QA 113 no  100.0 100.0  0.000  0.000 0.000  2  0 no  0.059 0  0 
       1  54 LEU QB  65 no  100.0  99.8  0.079  0.079 0.000  7  3 no  0.032 0  0 
       1  54 LEU QD  16 no  100.0  97.6  9.746  9.982 0.236 14  6 no  0.061 0  0 
       1  56 SER QB  99 no   65.0  75.2  0.610  0.812 0.202  4  1 yes 1.423 7 14 
       1  57 GLN QE  83 no  100.0  83.2  0.038  0.045 0.008  6  3 no  0.381 0  0 
       1  57 GLN QG  26 no   95.0  98.6  1.252  1.270 0.018 11  4 no  0.520 0  1 
       1  58 GLU QB  79 yes  95.0  77.1  0.152  0.196 0.045  6  2 no  0.943 0  1 
       1  59 GLY QA 123 no  100.0 100.0  0.056  0.056 0.000  1  0 no  0.279 0  0 
       1  61 ILE QG  32 no  100.0 100.0  0.846  0.846 0.000 10  1 no  0.017 0  0 
       1  62 GLN QB  53 yes 100.0  99.9  2.272  2.275 0.003  8  4 no  0.097 0  0 
       1  62 GLN QE  92 no   90.0 100.0  0.120  0.120 0.000  5  2 no  0.000 0  0 
       1  63 LYS QB  39 yes 100.0  99.7  1.019  1.022 0.003 10  4 no  0.096 0  0 
       1  63 LYS QD 118 yes  85.0  94.5  0.810  0.857 0.047  2  1 no  0.602 0  2 
       1  63 LYS QG  34 no  100.0  99.0  0.096  0.097 0.001 10  2 no  0.078 0  0 
       1  64 GLY QA 117 no   90.0 100.0  0.715  0.715 0.000  2  1 no  0.061 0  0 
       1  65 ASN QB  19 no  100.0 100.0  2.556  2.556 0.000 12  2 no  0.035 0  0 
       1  65 ASN QD  18 no   70.0  24.8  0.669  2.694 2.025 12  2 no  0.522 0  2 
       1  66 GLU QG  40 no   80.0  62.8  0.537  0.856 0.318 10  6 no  0.682 0  2 
       1  67 VAL QG   6 no  100.0 100.0 18.874 18.878 0.003 20  1 no  0.109 0  0 
       1  68 LEU QB  36 yes 100.0 100.0  1.543  1.543 0.000 10  3 no  0.015 0  0 
       1  68 LEU QD   8 no  100.0  99.5  9.876  9.927 0.051 18  8 no  0.682 0  2 
       1  69 SER QB  49 yes 100.0 100.0  0.550  0.551 0.000  8  1 no  0.073 0  0 
       1  70 ILE QG 102 no   25.0  75.8  0.205  0.271 0.065  3  0 no  0.942 0  2 
       1  71 ASN QB  91 no  100.0  93.0  0.023  0.024 0.002  5  2 no  0.350 0  0 
       1  71 ASN QD  10 no  100.0 100.0  0.852  0.852 0.000 15  2 no  0.050 0  0 
       1  73 LYS QB  74 no   60.0   9.9  0.006  0.057 0.052  6  1 no  0.343 0  0 
       1  73 LYS QD  78 no   70.0  21.5  0.160  0.744 0.584  6  2 yes 1.179 3 15 
       1  74 SER QB  71 no   85.0  71.6  0.569  0.795 0.226  6  0 yes 1.385 3  3 
       1  75 LEU QB  33 no  100.0  97.3  0.083  0.085 0.002 10  2 no  0.483 0  0 
       1  75 LEU QD   9 no  100.0 100.0  9.416  9.419 0.003 15  2 no  0.142 0  0 
       1  76 LYS QB 122 no  100.0 100.0  0.098  0.098 0.000  1  0 no  0.340 0  0 
       1  76 LYS QG  45 no   65.0  49.8  0.280  0.562 0.282  8  0 no  0.699 0 16 
       1  77 GLY QA 112 no  100.0   0.0  0.000  0.000 0.000  2  0 no  0.000 0  0 
       1  80 HIS QB  38 yes 100.0 100.0  0.863  0.864 0.000 10  4 no  0.026 0  0 
       1  81 HIS QB  95 no   15.0 100.0  0.000  0.000 0.000  4  0 no  0.000 0  0 
       1  82 ASP QB  13 no   85.0  58.2  0.015  0.025 0.011 14  0 no  0.223 0  0 
       1  84 LEU QB  35 no   90.0  98.8  1.156  1.170 0.014 10  3 no  0.359 0  0 
       1  84 LEU QD  21 no   60.0  61.9  1.959  3.165 1.206 12  3 yes 1.736 3 33 
       1  86 ILE QG  98 yes 100.0 100.0  0.556  0.556 0.000  4  1 no  0.034 0  0 
       1  87 LEU QB  22 yes 100.0  98.6  0.162  0.164 0.002 12  4 no  0.078 0  0 
       1  87 LEU QD   3 no  100.0  99.8 21.427 21.475 0.048 25  6 no  0.029 0  0 
       1  88 ARG QG  42 no   75.0  78.7  0.046  0.059 0.013  9  0 no  0.238 0  0 
       1  89 GLN QB  55 yes 100.0  99.8  3.301  3.306 0.005  7  1 no  0.134 0  0 
       1  89 GLN QE  94 no   85.0 100.0  0.037  0.037 0.000  5  3 no  0.009 0  0 
       1  89 GLN QG  17 yes 100.0 100.0  0.610  0.611 0.000 12  2 no  0.029 0  0 
       1  91 ARG QB  64 no   55.0  34.6  0.198  0.572 0.374  7  3 yes 0.910 0 11 
       1  91 ARG QD  77 no   80.0  12.3  0.051  0.412 0.362  6  2 no  0.284 0  0 
       1  91 ARG QG  97 no   45.0  87.3  0.406  0.465 0.059  4  1 yes 1.114 1 10 
       1  92 GLU QB  82 no   90.0  90.0  2.000  2.221 0.222  6  3 no  0.601 0  2 
       1  92 GLU QG  63 no   50.0  55.4  0.326  0.588 0.262  7  3 no  0.817 0  5 
       1  93 PRO QB  96 no  100.0 100.0  1.635  1.635 0.000  4  1 no  0.039 0  0 
       1  93 PRO QD  23 no   55.0  19.1  0.150  0.788 0.638 12  6 yes 1.365 8 10 
       1  94 ARG QB  90 no   80.0  82.6  0.499  0.604 0.105  5  1 no  0.459 0  0 
       1  94 ARG QD  51 no   55.0   6.7  0.094  1.393 1.300  8  3 yes 1.217 2 17 
       1  94 ARG QG  24 yes  80.0  20.6  0.561  2.725 2.164 11  3 yes 1.750 4 14 
       1  95 GLN QB  58 no  100.0  99.6  0.465  0.467 0.002  7  2 no  0.106 0  0 
       1  95 GLN QE  57 no  100.0 100.0  0.370  0.371 0.000  7  2 no  0.036 0  0 
       1  97 VAL QG  31 no  100.0 100.0 11.562 11.564 0.002 10  1 no  0.073 0  0 
       1  98 ILE QG  70 no  100.0  97.0  0.000  0.000 0.000  6  0 no  0.038 0  0 
       1  99 VAL QG  14 no  100.0  96.2 16.845 17.502 0.657 14  2 no  0.018 0  0 
       1 101 ARG QB  81 no   40.0  94.5  0.252  0.267 0.015  6  3 no  0.274 0  0 
       1 101 ARG QD  28 yes 100.0  99.8  0.949  0.950 0.002 11  7 no  0.175 0  0 
       1 101 ARG QG  69 no   75.0  18.0  0.002  0.010 0.008  6  0 no  0.233 0  0 
       1 102 LYS QB  76 yes  85.0  93.3  0.300  0.321 0.021  6  2 no  0.425 0  0 
       1 102 LYS QD 111 yes  80.0  80.9  1.014  1.253 0.239  2  0 yes 1.539 2  3 
       1 102 LYS QG  56 no   70.0  76.4  0.719  0.941 0.222  7  2 yes 1.212 2  4 
       1 103 LEU QB  89 no   95.0  90.2  0.030  0.033 0.003  5  1 no  0.171 0  0 
       1 103 LEU QD  15 no  100.0  89.0  5.622  6.318 0.696 14  3 no  0.199 0  0 
       1 105 PRO QB 110 no  100.0 100.0  0.050  0.050 0.000  2  0 no  0.463 0  0 
       1 105 PRO QD  85 no   90.0  78.3  0.055  0.070 0.015  5  0 no  0.905 0  1 
       1 105 PRO QG 121 yes 100.0  99.9  0.137  0.137 0.000  1  0 no  0.040 0  0 
       1 106 GLU QG 120 no   80.0  74.5  0.062  0.083 0.021  1  0 no  0.797 0  3 
       1 108 MET QB 107 no   80.0  87.6  0.178  0.203 0.025  3  2 no  0.372 0  0 
       1 108 MET QG 119 no   80.0  87.6  0.178  0.203 0.025  2  2 no  0.372 0  0 
       1 110 ASP QB 109 no  100.0  94.0  0.000  0.000 0.000  2  0 no  0.027 0  0 
       1 111 LEU QB 106 no  100.0 100.0  0.265  0.265 0.000  3  1 no  0.000 0  0 
       1 111 LEU QD 100 yes  85.0  83.4  1.850  2.218 0.368  4  2 yes 1.722 3  3 
       1 112 ASN QB 116 no  100.0  80.9  1.560  1.928 0.368  2  1 no  0.000 0  0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Monday, May 20, 2024 5:07:38 PM GMT (wattos1)