NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
397098 1srz 6166 cing 4-filtered-FRED Wattos check stereo assignment distance


data_1srz


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        86
    _Stereo_assign_list.Swap_count           17
    _Stereo_assign_list.Swap_percentage      19.8
    _Stereo_assign_list.Deassign_count       19
    _Stereo_assign_list.Deassign_percentage  22.1
    _Stereo_assign_list.Model_count          24
    _Stereo_assign_list.Total_e_low_states   20.328
    _Stereo_assign_list.Total_e_high_states  78.404
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  1 GLU QB 85 no  100.0   0.0 0.000  0.000 0.000  3  0 no  0.000  0  0 
       1  3 GLU QB 71 no  100.0   0.0 0.000  0.000 0.000  8  2 no  0.000  0  0 
       1  3 GLU QG 86 no  100.0   0.0 0.000  0.000 0.000  2  2 no  0.000  0  0 
       1  4 PHE QB 70 no  100.0   0.0 0.000  0.000 0.000  8  0 no  0.000  0  0 
       1  5 VAL QG 69 no  100.0   0.0 0.000  0.000 0.000  8  0 no  0.000  0  0 
       1  6 ARG QB 39 no   95.8  94.3 2.349  2.491 0.142 14  6 no  0.401  0  0 
       1  6 ARG QG 80 no   62.5  10.4 0.124  1.193 1.069  6  0 yes 1.929 12 14 
       1  7 ILE QG 59 no   41.7  13.6 0.221  1.631 1.409 10  1 yes 1.279  3  9 
       1  8 CYS QB 23 yes  79.2  47.5 2.705  5.693 2.988 17  5 yes 2.394  6 11 
       1 10 LYS QB 45 no   37.5  15.9 0.314  1.970 1.656 13  8 yes 2.709 11 12 
       1 10 LYS QD 77 no   54.2   8.6 0.012  0.142 0.130  8  6 no  0.401  0  0 
       1 10 LYS QG 52 no   58.3  15.4 0.022  0.140 0.119 12  7 no  0.401  0  0 
       1 12 TYR QB 12 no   91.7  66.5 0.866  1.302 0.436 23  9 no  0.186  0  0 
       1 13 LEU QB 20 no   79.2  69.0 0.061  0.088 0.027 18  8 no  0.323  0  0 
       1 13 LEU QD  9 no   75.0  89.6 2.780  3.103 0.322 24  9 yes 1.243  1 10 
       1 15 LEU QB  8 yes  91.7  66.9 0.466  0.696 0.231 24  8 no  0.552  0  1 
       1 15 LEU QD  2 yes  83.3  80.9 8.556 10.579 2.023 38 18 yes 2.323 12 26 
       1 16 GLU QB 56 no   83.3  47.1 0.074  0.157 0.083 11  1 no  0.717  0  8 
       1 17 ASN QB 26 no  100.0  17.3 0.001  0.004 0.003 17  9 no  0.133  0  0 
       1 17 ASN QD 61 no  100.0  99.5 0.196  0.197 0.001 10  4 no  0.074  0  0 
       1 18 GLY QA 48 no   91.7  93.1 0.548  0.589 0.041 12  4 no  0.221  0  0 
       1 19 LYS QD 51 no   41.7   2.4 0.001  0.047 0.046 12  5 no  0.574  0  2 
       1 19 LYS QG 38 no   45.8  55.6 0.008  0.015 0.007 14  5 no  0.100  0  0 
       1 20 VAL QG  4 yes  91.7  88.7 6.492  7.323 0.831 33  8 yes 1.967  7 16 
       1 21 PHE QB 37 no  100.0  98.2 0.087  0.089 0.002 14  4 no  0.351  0  0 
       1 22 LEU QB 50 no   58.3  45.9 0.037  0.081 0.044 12  5 no  0.928  0  2 
       1 22 LEU QD 72 no   50.0  66.2 1.214  1.832 0.618  8  3 yes 2.308 13 27 
       1 24 GLY QA 55 no   58.3  39.1 0.010  0.025 0.015 11  0 no  0.246  0  0 
       1 27 LEU QB 33 no  100.0  99.8 1.661  1.664 0.003 15  7 no  0.102  0  0 
       1 28 PRO QB 67 no  100.0 100.0 0.071  0.071 0.000  9  6 no  0.298  0  0 
       1 28 PRO QD 18 yes 100.0  97.7 0.216  0.221 0.005 19 12 no  0.124  0  0 
       1 28 PRO QG 76 no  100.0   0.0 0.000  0.000 0.000  8  6 no  0.000  0  0 
       1 30 LEU QB 29 yes  75.0  65.9 0.787  1.193 0.407 16  6 no  0.437  0  0 
       1 30 LEU QD 84 yes  87.5  82.5 1.702  2.063 0.362  4  3 yes 1.271  2  5 
       1 31 ASP QB 78 no  100.0   0.0 0.000  0.000 0.000  7  0 no  0.062  0  0 
       1 32 GLY QA 57 no   70.8   1.8 0.021  1.165 1.143 11  6 no  0.246  0  0 
       1 34 ARG QB 31 no  100.0   0.0 0.000  0.001 0.001 15  5 no  0.118  0  0 
       1 34 ARG QG 60 no   50.0  61.3 0.139  0.226 0.087 10  4 no  0.767  0  3 
       1 35 VAL QG  3 no   91.7  97.0 5.556  5.729 0.173 37 11 yes 1.148  1  5 
       1 36 GLU QB 16 no   91.7  79.2 0.054  0.068 0.014 20 12 no  0.436  0  0 
       1 36 GLU QG 75 no  100.0   0.0 0.000  0.002 0.002  8  4 no  0.122  0  0 
       1 37 PHE QB 13 yes 100.0  61.5 0.865  1.406 0.541 23 10 no  0.000  0  0 
       1 38 ARG QB 35 no   70.8  19.9 0.018  0.090 0.072 15  9 no  0.323  0  0 
       1 38 ARG QD 66 no   25.0  11.3 0.007  0.059 0.052  9  5 no  0.889  0  2 
       1 38 ARG QG 44 no  100.0  38.6 0.053  0.137 0.084 13  7 no  0.702  0  2 
       1 39 CYS QB 17 yes 100.0 100.0 0.453  0.453 0.000 19  5 no  0.000  0  0 
       1 40 ASP QB 43 no   50.0  42.0 0.064  0.153 0.088 13  5 no  0.716  0  3 
       1 41 PRO QB 46 no   70.8 100.0 0.050  0.050 0.000 13  9 no  0.000  0  0 
       1 41 PRO QD 19 yes 100.0  88.5 0.764  0.863 0.100 19 13 no  0.716  0  3 
       1 41 PRO QG 64 no   41.7 100.0 0.034  0.034 0.000 10  8 no  0.000  0  0 
       1 42 ASP QB 68 no  100.0   0.0 0.000  0.000 0.000  8  0 no  0.000  0  0 
       1 43 PHE QB 10 no  100.0  99.9 1.265  1.266 0.001 23  6 no  0.038  0  0 
       1 45 LEU QB 24 no  100.0  97.3 0.000  0.000 0.000 17  6 no  0.033  0  0 
       1 45 LEU QD  1 no   62.5  58.1 0.136  0.235 0.099 44 27 yes 0.604  0 14 
       1 46 VAL QG 22 no   95.8  97.5 4.057  4.161 0.104 17  3 yes 1.070  1  3 
       1 47 GLY QA 49 no   66.7  88.1 0.101  0.115 0.014 12  5 no  0.969  0  2 
       1 48 SER QB 47 yes  91.7  60.4 0.100  0.166 0.066 12  1 no  0.584  0  1 
       1 49 SER QB 62 no   58.3  54.5 1.170  2.149 0.978 10  5 yes 1.966 14 14 
       1 50 ARG QB 79 no  100.0   0.0 0.000  0.000 0.000  7  1 no  0.000  0  0 
       1 50 ARG QG 81 no   41.7  53.5 0.005  0.009 0.004  5  1 no  0.226  0  0 
       1 51 SER QB  7 no  100.0   0.0 0.000  0.031 0.031 24  5 no  0.036  0  0 
       1 52 VAL QG 11 yes  79.2  72.6 4.511  6.210 1.699 23  8 yes 2.443 13 20 
       1 53 CYS QB 21 no   45.8   6.8 0.018  0.259 0.241 17  1 yes 1.116  1  9 
       1 54 SER QB 34 no   54.2  44.2 0.248  0.562 0.313 15  8 no  0.000  0  0 
       1 55 GLN QB 58 no   87.5  82.3 0.056  0.068 0.012 11  7 no  0.311  0  0 
       1 55 GLN QG 74 no   83.3  73.4 0.052  0.071 0.019  8  4 no  0.311  0  0 
       1 56 GLY QA 32 no   33.3   2.4 0.003  0.144 0.141 15  6 yes 1.167  1  3 
       1 57 GLN QB 42 no  100.0   0.0 0.000  0.000 0.000 13  5 no  0.000  0  0 
       1 57 GLN QE 83 no  100.0   0.0 0.000  0.000 0.000  5  2 no  0.000  0  0 
       1 58 TRP QB 15 yes 100.0  99.8 0.830  0.831 0.001 21  1 no  0.100  0  0 
       1 61 PRO QB 53 no  100.0   0.0 0.000  0.000 0.000 12  8 no  0.000  0  0 
       1 61 PRO QD 41 yes 100.0 100.0 0.396  0.396 0.000 14  8 no  0.067  0  0 
       1 61 PRO QG 63 no  100.0   0.0 0.000  0.000 0.000 10  8 no  0.000  0  0 
       1 62 LYS QB 40 yes 100.0  99.5 0.119  0.120 0.001 14  7 no  0.080  0  0 
       1 62 LYS QD 54 no  100.0   0.0 0.000  0.000 0.000 12 10 no  0.012  0  0 
       1 62 LYS QE 30 no   62.5  23.4 0.156  0.667 0.511 16 11 yes 1.418  6  9 
       1 62 LYS QG  6 no   62.5  78.5 1.392  1.773 0.381 26 19 yes 1.323  4  6 
       1 63 PRO QB 14 no  100.0   0.0 0.000  0.000 0.000 23 13 no  0.039  0  0 
       1 63 PRO QD 27 yes 100.0  98.1 0.107  0.109 0.002 17 11 no  0.000  0  0 
       1 63 PRO QG  5 yes 100.0  95.1 0.577  0.606 0.030 28 19 no  0.000  0  0 
       1 65 CYS QB 25 no  100.0  97.8 0.128  0.131 0.003 17  9 no  0.133  0  0 
       1 66 GLN QB 36 no   91.7  77.5 0.052  0.067 0.015 14  2 no  0.499  0  0 
       1 66 GLN QE 82 no   29.2  89.8 0.207  0.230 0.024  5  2 no  0.049  0  0 
       1 67 VAL QG 28 no   87.5  92.7 2.714  2.927 0.213 16  2 yes 1.814  1  2 
       1 68 ASN QB 73 no   50.0  26.9 0.016  0.060 0.044  8  4 no  0.691  0  1 
       1 68 ASN QD 65 no   95.8  48.0 0.001  0.002 0.001  9  4 no  0.165  0  0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Friday, May 17, 2024 1:34:38 PM GMT (wattos1)