NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
396335 1sb0 6095 cing 4-filtered-FRED Wattos check stereo assignment distance


data_1sb0


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        128
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.602
    _Stereo_assign_list.Total_e_high_states  172.110
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  2 VAL QG  93 no  70.0 100.0  0.052  0.052 0.000  4  0 no 0.000 0 0 
       1  3 ARG QG  57 no  60.0  99.5  0.794  0.797 0.004  8  0 no 0.162 0 0 
       1  4 LYS QB  53 no  25.0  73.5  0.003  0.004 0.001  9  3 no 0.052 0 0 
       1  4 LYS QD  18 no  85.0  85.8  0.071  0.082 0.012 16  7 no 0.140 0 0 
       1  4 LYS QE  68 no  15.0  88.5  0.029  0.033 0.004  7  5 no 0.090 0 0 
       1  4 LYS QG 119 no  75.0 100.0  0.016  0.016 0.000  2  1 no 0.000 0 0 
       1  5 GLY QA 118 no 100.0 100.0  0.003  0.003 0.000  2  0 no 0.000 0 0 
       1  6 TRP QB  31 no  95.0  87.0  0.008  0.010 0.001 13  2 no 0.100 0 0 
       1  8 GLU QB  51 no  50.0  99.5  0.564  0.567 0.003  9  0 no 0.166 0 0 
       1  9 HIS QB  59 no  10.0  15.4  0.001  0.007 0.006  8  1 no 0.109 0 0 
       1 10 VAL QG   3 no 100.0 100.0 13.755 13.756 0.002 37 14 no 0.098 0 0 
       1 12 GLN QB  63 no  90.0  98.3  0.199  0.202 0.003  7  0 no 0.093 0 0 
       1 12 GLN QE 128 no 100.0   0.0  0.000  0.000 0.000  1  0 no 0.000 0 0 
       1 13 ASP QB  62 no  45.0  98.7  0.183  0.185 0.002  7  0 no 0.085 0 0 
       1 14 LEU QB  19 no  85.0  99.4  0.128  0.129 0.001 16  8 no 0.036 0 0 
       1 14 LEU QD   5 no 100.0 100.0 16.655 16.658 0.003 31 17 no 0.083 0 0 
       1 15 ARG QB  86 no  95.0  95.9  0.024  0.025 0.001  5  2 no 0.101 0 0 
       1 15 ARG QD 127 no   5.0 100.0  0.005  0.005 0.000  1  0 no 0.000 0 0 
       1 15 ARG QG  88 no  95.0 100.0  0.210  0.210 0.000  5  3 no 0.000 0 0 
       1 16 SER QB  96 no  80.0   8.6  0.001  0.009 0.008  4  1 no 0.142 0 0 
       1 17 HIS QB  47 no 100.0   0.0  0.000  0.000 0.000 10  2 no 0.000 0 0 
       1 18 LEU QB  13 no 100.0  99.9  2.045  2.047 0.003 18  6 no 0.073 0 0 
       1 18 LEU QD   7 no 100.0  99.9  8.095  8.099 0.004 28 13 no 0.102 0 0 
       1 19 VAL QG   4 no 100.0 100.0 15.736 15.741 0.005 35 18 no 0.112 0 0 
       1 20 HIS QB  72 no  50.0  97.6  0.242  0.248 0.006  6  0 no 0.149 0 0 
       1 21 LYS QB  41 no  95.0  99.8  1.401  1.404 0.003 11  6 no 0.143 0 0 
       1 21 LYS QG  50 no  90.0  23.1  0.001  0.004 0.003 10  6 no 0.077 0 0 
       1 22 LEU QB  20 no 100.0  98.3  2.154  2.191 0.037 15  3 no 0.255 0 0 
       1 23 VAL QG  12 no 100.0 100.0 15.312 15.316 0.004 18  6 no 0.089 0 0 
       1 24 GLN QE 122 no 100.0   0.0  0.000  0.000 0.000  2  2 no 0.000 0 0 
       1 24 GLN QG  46 no 100.0  99.7  1.249  1.253 0.003 10  2 no 0.118 0 0 
       1 26 ILE QG  29 no  90.0  83.7  0.193  0.230 0.038 13  1 no 0.255 0 0 
       1 27 PHE QB  26 no 100.0 100.0  0.000  0.000 0.000 14  7 no 0.011 0 0 
       1 28 PRO QB  78 no 100.0 100.0  0.009  0.009 0.000  5  0 no 0.163 0 0 
       1 30 PRO QB  77 no  95.0  99.9  0.776  0.777 0.001  5  0 no 0.055 0 0 
       1 31 ASP QB  56 no  20.0  65.7  0.005  0.007 0.002  8  0 no 0.132 0 0 
       1 32 PRO QB  61 no 100.0 100.0  1.513  1.513 0.000  7  0 no 0.014 0 0 
       1 32 PRO QG 100 no 100.0   0.0  0.000  0.000 0.000  3  0 no 0.000 0 0 
       1 35 LEU QB  85 no 100.0 100.0  1.906  1.906 0.000  5  2 no 0.025 0 0 
       1 35 LEU QD  81 no 100.0 100.0  0.793  0.793 0.000  5  1 no 0.031 0 0 
       1 36 LYS QB  80 no  30.0   2.2  0.000  0.004 0.004  5  1 no 0.083 0 0 
       1 36 LYS QG  95 no  85.0  56.7  0.001  0.002 0.001  4  1 no 0.070 0 0 
       1 38 ARG QG 117 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 40 MET QB  67 no  95.0  74.9  0.003  0.004 0.001  7  3 no 0.092 0 0 
       1 40 MET QG  39 no 100.0  99.6  0.253  0.254 0.001 11  4 no 0.057 0 0 
       1 42 ASN QB  65 no  85.0  82.0  0.013  0.015 0.003  7  2 no 0.107 0 0 
       1 42 ASN QD 121 no 100.0   0.0  0.000  0.000 0.000  2  2 no 0.000 0 0 
       1 43 LEU QD   6 no 100.0  97.9  6.343  6.479 0.136 28  7 no 0.499 0 0 
       1 44 VAL QG  15 no 100.0 100.0 17.829 17.830 0.001 17  5 no 0.057 0 0 
       1 48 LYS QE  97 no  80.0 100.0  0.334  0.334 0.000  4  4 no 0.007 0 0 
       1 48 LYS QG  28 no 100.0 100.0  0.771  0.771 0.000 14  9 no 0.012 0 0 
       1 49 LYS QB  49 no  55.0  44.8  0.008  0.018 0.010 10  4 no 0.116 0 0 
       1 49 LYS QD 120 no 100.0  99.7  0.118  0.118 0.000  2  2 no 0.043 0 0 
       1 49 LYS QG  60 no 100.0  98.1  0.111  0.114 0.002  8  4 no 0.052 0 0 
       1 50 VAL QG   8 no 100.0  98.0  2.673  2.727 0.054 27 11 no 0.370 0 0 
       1 51 GLU QB  11 no 100.0  99.9  1.786  1.788 0.001 19  9 no 0.055 0 0 
       1 51 GLU QG  32 no 100.0   0.0  0.000  0.000 0.000 13  9 no 0.000 0 0 
       1 52 GLY QA 102 no 100.0   0.0  0.000  0.000 0.000  3  1 no 0.000 0 0 
       1 53 ASP QB  52 no 100.0  97.5  2.076  2.128 0.052  9  1 no 0.370 0 0 
       1 54 MET QB  54 no 100.0  95.5  0.017  0.018 0.001  9  4 no 0.057 0 0 
       1 54 MET QG  16 no 100.0 100.0  0.099  0.099 0.000 17  7 no 0.000 0 0 
       1 55 TYR QB  36 no   5.0 100.0  0.000  0.000 0.000 11  1 no 0.000 0 0 
       1 56 GLU QB  33 no 100.0   0.0  0.000  0.006 0.006 12  4 no 0.072 0 0 
       1 56 GLU QG  38 no  45.0  86.1  0.035  0.041 0.006 11  4 no 0.100 0 0 
       1 59 ASN QB  66 no  70.0  30.6  0.000  0.000 0.000  7  3 no 0.029 0 0 
       1 59 ASN QD 107 no 100.0   0.0  0.000  0.000 0.000  3  3 no 0.000 0 0 
       1 61 ARG QB  27 no 100.0 100.0  0.269  0.269 0.000 14  8 no 0.000 0 0 
       1 61 ARG QD  17 no 100.0  99.7  3.136  3.145 0.010 17 13 no 0.140 0 0 
       1 61 ARG QG  34 no 100.0  99.7  0.767  0.769 0.002 12  7 no 0.048 0 0 
       1 62 ASP QB  92 no  35.0  37.5  0.002  0.005 0.003  4  0 no 0.105 0 0 
       1 63 GLU QG  45 no  60.0  99.9  0.759  0.760 0.001 10  2 no 0.058 0 0 
       1 64 TYR QB  35 no 100.0   0.0  0.000  0.000 0.000 11  0 no 0.000 0 0 
       1 65 TYR QB  43 no  90.0 100.0  0.003  0.003 0.000 10  0 no 0.000 0 0 
       1 66 HIS QB  42 no 100.0  99.7  0.219  0.220 0.001 10  0 no 0.030 0 0 
       1 67 LEU QB  94 no 100.0 100.0  0.046  0.046 0.000  4  1 no 0.000 0 0 
       1 67 LEU QD  14 no 100.0  98.4  2.075  2.110 0.035 17  5 no 0.261 0 0 
       1 68 LEU QB  10 no 100.0 100.0  3.895  3.895 0.000 20  9 no 0.003 0 0 
       1 68 LEU QD   1 no 100.0 100.0 11.196 11.200 0.004 43 25 no 0.103 0 0 
       1 70 GLU QB  99 no 100.0 100.0  0.159  0.159 0.000  3  0 no 0.000 0 0 
       1 70 GLU QG  91 no  65.0  99.7  0.737  0.739 0.002  4  0 no 0.059 0 0 
       1 71 LYS QB  22 no 100.0   0.0  0.000  0.002 0.002 15  6 no 0.037 0 0 
       1 71 LYS QD  24 no 100.0  21.3  0.001  0.004 0.003 15 11 no 0.049 0 0 
       1 71 LYS QG   9 no 100.0  99.9  3.700  3.705 0.004 24 14 no 0.056 0 0 
       1 72 ILE QG  73 no 100.0  99.6  0.800  0.803 0.003  6  1 no 0.068 0 0 
       1 73 TYR QB  30 no 100.0 100.0  0.008  0.008 0.000 13  2 no 0.130 0 0 
       1 74 LYS QB 105 no  95.0  99.6  0.357  0.358 0.001  3  2 no 0.063 0 0 
       1 74 LYS QG  84 no 100.0  99.8  0.859  0.861 0.002  5  2 no 0.101 0 0 
       1 75 ILE QG  37 no 100.0  99.8  1.063  1.065 0.002 11  3 no 0.070 0 0 
       1 76 GLN QB  48 no 100.0  99.9  0.895  0.896 0.001 10  4 no 0.074 0 0 
       1 76 GLN QE 104 no 100.0 100.0  0.001  0.001 0.000  3  2 no 0.091 0 0 
       1 76 GLN QG  21 no  95.0  99.6  0.828  0.832 0.003 15  5 no 0.083 0 0 
       1 77 LYS QB  25 no  80.0  27.7  0.003  0.011 0.008 14  5 no 0.144 0 0 
       1 77 LYS QD 101 no 100.0   0.0  0.000  0.000 0.000  3  1 no 0.007 0 0 
       1 77 LYS QE  69 no 100.0  99.9  1.221  1.222 0.001  7  6 no 0.074 0 0 
       1 77 LYS QG  23 no  20.0  99.2  0.189  0.190 0.002 15  8 no 0.084 0 0 
       1 78 GLU QB  79 no 100.0  99.8  2.679  2.686 0.007  5  1 no 0.131 0 0 
       1 78 GLU QG  74 no  90.0  99.2  0.869  0.877 0.007  6  2 no 0.101 0 0 
       1 79 LEU QB  55 no  65.0  97.8  0.168  0.172 0.004  8  0 no 0.096 0 0 
       1 79 LEU QD  76 no 100.0  99.8  1.722  1.725 0.004  5  0 no 0.102 0 0 
       1 80 GLU QB 116 no  30.0  98.3  0.018  0.018 0.000  2  0 no 0.061 0 0 
       1 81 GLU QB 103 no  50.0  47.6  0.001  0.003 0.001  3  2 no 0.050 0 0 
       1 81 GLU QG  83 no  90.0  95.4  0.063  0.066 0.003  5  2 no 0.147 0 0 
       1 82 LYS QG  75 no  35.0  99.3  0.042  0.043 0.000  5  0 no 0.070 0 0 
       1 84 ARG QB  82 no  95.0  51.5  0.002  0.003 0.002  5  2 no 0.084 0 0 
       1 84 ARG QG  64 no 100.0  97.6  0.261  0.268 0.006  7  2 no 0.205 0 0 
       1 86 ARG QB  71 no  25.0  17.8  0.000  0.001 0.001  6  0 no 0.084 0 0 
       2  2 GLU QB 115 no  50.0  85.9  0.037  0.043 0.006  2  0 no 0.158 0 0 
       2  4 ARG QD  90 no 100.0  99.6  1.585  1.592 0.007  4  0 no 0.126 0 0 
       2  6 LYS QB 114 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       2  7 GLU QB 113 no  15.0  98.4  0.001  0.001 0.000  2  0 no 0.021 0 0 
       2  7 GLU QG 112 no  50.0  99.8  1.141  1.143 0.002  2  0 no 0.165 0 0 
       2  8 LEU QB  98 no  95.0 100.0  1.455  1.455 0.001  3  0 no 0.046 0 0 
       2  8 LEU QD  44 no 100.0  99.9  5.703  5.708 0.005 10  2 no 0.104 0 0 
       2  9 GLU QB  70 no  10.0  92.2  0.030  0.032 0.003  6  0 no 0.105 0 0 
       2  9 GLU QG 111 no  15.0 100.0  0.048  0.048 0.000  2  0 no 0.000 0 0 
       2 10 LEU QB 110 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.050 0 0 
       2 11 LEU QB 126 no 100.0 100.0  0.162  0.162 0.000  1  0 no 0.000 0 0 
       2 12 LEU QB  58 no 100.0  99.8  0.760  0.762 0.002  8  1 no 0.068 0 0 
       2 12 LEU QD   2 no 100.0  99.8  3.039  3.044 0.005 39 20 no 0.143 0 0 
       2 13 MET QB  89 no  90.0 100.0  0.167  0.167 0.000  4  0 no 0.000 0 0 
       2 16 GLU QB  87 no  20.0  26.4  0.001  0.005 0.004  5  3 no 0.094 0 0 
       2 16 GLU QG 106 no  80.0 100.0  1.296  1.296 0.000  3  3 no 0.046 0 0 
       2 19 LEU QB 125 no  95.0 100.0  0.002  0.002 0.000  1  0 no 0.105 0 0 
       2 19 LEU QD  40 no  35.0  99.6  0.331  0.332 0.001 11  6 no 0.056 0 0 
       2 20 LYS QB 124 no  30.0  99.4  0.056  0.056 0.000  1  0 no 0.078 0 0 
       2 20 LYS QG 109 no  40.0 100.0  0.081  0.081 0.000  2  0 no 0.000 0 0 
       2 21 GLY QA 108 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       2 23 GLN QB 123 no 100.0   0.0  0.000  0.000 0.000  1  0 no 0.000 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Friday, May 17, 2024 8:37:20 AM GMT (wattos1)