NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage position program type subtype subsubtype
563757 2m9f 19292 cing 1-original 2 DYANA/DIANA distance hydrogen bond simple


# Hydrogen bonding restraints SEA004  5-residue-turn with GlcNAc


# Hbonds.lol  (lol = lower distance limit)

# 6 TRP  H     3 PRO  O          1.80     # -0.3  OK
# 6 TRP  N     3 PRO  O          2.70     # -0.3
# 7 GLU  H    19 PHE  O          1.80     # -2.6  PDB: big angle
# 7 GLU  N    19 PHE  O          2.70     # -2.6
# 9 ARG  H    17 TYR  O          1.80     # -4.2  high! ar? +0.40
# 9 ARG  N    17 TYR  O          2.70     # -4.2
# 11 PHE  H   15 THR  O          1.80     # -3.4  high! ar? +0.40
# 11 PHE  N   15 THR  O          2.70     # -3.4
# 14 GLY  H   11 PHE  O          1.80     # -3.8  bridged with THR15 +0.40
# 14 GLY  N   11 PHE  O          2.70     # -3.8
# 15 THR  H   11 PHE  O          1.80     # -4.7  bridged with GLY14 +0.80
# 15 THR  N   11 PHE  O          2.70     # -4.7
# 17 TYR  H    9 ARG  O          1.80     # -0.8  OK but long in pdb +0.30
# 17 TYR  N    9 ARG  O          2.70     # -0.8
# 18 TYR  H   27 GLN  O          1.80     # -4.8  C-terminal mobility or Ar sc? +0.30
# 18 TYR  N   27 GLN  O          2.70     # -4.8
# 19 PHE  H    7 GLU  O          1.80     # -1.9  OK
# 19 PHE  N    7 GLU  O          2.70     # -1.9
# 20 ASN  H   25 ALA  O          1.80     # -4.0  high! ar? +0.30
# 20 ASN  N   25 ALA  O          2.70     # -4.0
# 21 HIS  H    5 GLY  O          1.80     # -1.6  PDB: big angle +0.30
# 21 HIS  N    5 GLY  O          2.70     # -1.6
# 22 ILE  H   20 ASN  OD1        1.80     # -4.5  bridged with THR23 +0.30
# 22 ILE  N   20 ASN  OD1        2.70     # -4.5
# 23 THR  H   20 ASN  OD1        1.80     # -1.7  bridged with ILE22 +0.30
# 23 THR  N   20 ASN  OD1        2.70     # -1.7
# 24 ASN  H   20 ASN  O          1.80     # -2.7  PDB: big angle +0.30
# 24 ASN  N   20 ASN  O          2.70     # -2.7
# 25 ALA  H   23 THR  OG1        1.80     # -2.7  OK +0.20
# 25 ALA  N   23 THR  OG1        2.70     # -2.7
# 27 GLN  H   18 TYR  O          1.80     # -2.7  but present in PDB. Ar sc? +0.40
# 27 GLN  N   18 TYR  O          2.70     # -2.7
# 28 PHE  H   29 GLU  OE1        1.80     # -2.6  OK +0.30
# 28 PHE  N   29 GLU  OE1        2.70     # -2.6


# Hbonds.upl  (upl = upper distance limit)

6 TRP  H     3 PRO  O          2.50     # -0.3  OK
6 TRP  N     3 PRO  O          3.60     # -0.3
7 GLU  H    19 PHE  O          2.20     # -2.6  PDB: big angle
7 GLU  N    19 PHE  O          3.00     # -2.6
9 ARG  H    17 TYR  O          2.40     # -4.2  high! ar? +0.40
9 ARG  N    17 TYR  O          3.40     # -4.2
11 PHE  H   15 THR  O          2.40     # -3.4  high! ar? +0.40
11 PHE  N   15 THR  O          3.40     # -3.4
14 GLY  H   11 PHE  O          2.40     # -3.8  bridged with THR15 +0.40
14 GLY  N   11 PHE  O          3.40     # -3.8
15 THR  H   11 PHE  O          3.20     # -4.7  bridged with GLY14 +0.80
15 THR  N   11 PHE  O          3.80     # -4.7
17 TYR  H    9 ARG  O          2.30     # -0.8  OK but long in pdb +0.30
17 TYR  N    9 ARG  O          3.30     # -0.8
18 TYR  H   27 GLN  O          2.30     # -4.8  C-terminal mobility or Ar sc? +0.30
18 TYR  N   27 GLN  O          3.30     # -4.8
19 PHE  H    7 GLU  O          2.20     # -1.9  OK
19 PHE  N    7 GLU  O          3.00     # -1.9
20 ASN  H   25 ALA  O          2.30     # -4.0  high! ar? +0.30
20 ASN  N   25 ALA  O          3.30     # -4.0
21 HIS  H    5 GLY  O          2.30     # -1.6  PDB: big angle +0.30
21 HIS  N    5 GLY  O          3.30     # -1.6
22 ILE  H   20 ASN  OD1        2.30     # -4.5  bridged with THR23 +0.30
22 ILE  N   20 ASN  OD1        3.30     # -4.5
23 THR  H   20 ASN  OD1        2.30     # -1.7  bridged with ILE22 +0.30
23 THR  N   20 ASN  OD1        3.30     # -1.7
24 ASN  H   20 ASN  O          2.30     # -2.7  PDB: big angle +0.30
24 ASN  N   20 ASN  O          3.30     # -2.7
25 ALA  H   23 THR  OG1        2.20     # -2.7  OK +0.20
25 ALA  N   23 THR  OG1        3.20     # -2.7
27 GLN  H   18 TYR  O          2.40     # -2.7  but present in PDB. Ar sc? +0.40
27 GLN  N   18 TYR  O          3.40     # -2.7
# 28 PHE  H   29 GLU  OE1        2.30     # -2.6  OK +0.30
# 28 PHE  N   29 GLU  OE1        3.30     # -2.6




Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Saturday, May 18, 2024 11:46:54 AM GMT (wattos1)