NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id cing stage position program type subtype subsubtype
4534 1f9l cing 1-original 1 XPLOR/CNS distance hydrogen bond simple


 {base pair constraints}

 {base pairing between 1 and 22 GC pair}
assign (residue 22 and name h41)(residue 1 and name o6) 1.7 .1 .1
assign (residue 22 and name n3)(residue 1 and name h21) 3.0 .1 .1
assign (residue 22 and name o2)(residue 1 and name h21) 2.0 .1 .1
assign (residue 22 and name n3)(residue 1 and name h1) 1.9 .1 .1

 {base pairing between 2 and 21 GC pair}
assign (residue 21 and name h41)(residue 2 and name o6) 1.7 .1 .1
assign (residue 21 and name n3)(residue 2 and name h21) 3.0 .1 .1
assign (residue 21 and name o2)(residue 2 and name h21) 2.0 .1 .1
assign (residue 21 and name n3)(residue 2 and name h1) 1.9 .1 .1

 {base pairing between 3 and 20 CG pair}
assign (residue 3 and name h41)(residue 20 and name o6) 1.7 0.1 0.1
assign (residue 3 and name n3)(residue 20 and name h21) 3.0 0.1 0.1
assign (residue 3 and name o2)(residue 20 and name h21) 2.0 0.1 0.1
assign (residue 3 and name n3)(residue 20 and name h1) 1.9 0.1 0.1

 {base pairing between 4 and 19 GC pair}
assign (residue 19 and name h41)(residue 4 and name o6) 1.8 0.1 0.1
assign (residue 19 and name n3)(residue 4 and name h21) 3.1 0.1 0.1
assign (residue 19 and name o2)(residue 4 and name h21) 2.1 0.1 0.1
assign (residue 19 and name n3)(residue 4 and name h1) 2.0 0.1 0.1

 {tentative hydrogen bonding btw A6 and G17}
assign (residue 6 and name n1)(residue 17 and name h1) 1.75 0.1 0.1
assign (residue 6 and name n1)(residue 17 and name n1) 2.75 0.1 0.1
assign (residue 6 and name h61)(residue 17 and name o6) 1.59 0.1 0.1
assign (residue 6 and name n6)(residue 17 and name o6) 2.59 0.1 0.1

 {base pairing between 7 and 16 GU pair, use regular GU bp constr. from Saenger}
assign (residue 7 and name h1)(residue 16 and name o2) 1.9 0.2 0.2
assign (residue 7 and name o6)(residue 16 and name h3) 2.0 0.2 0.2
assign (residue 7 and name h1)(residue 16 and name h3) 2.7 0.2 0.2
assign (residue 7 and name o6)(residue 16 and name o2) 3.8 0.2 0.2
assign (residue 7 and name n1)(residue 16 and name n3) 3.8 0.2 0.2

 {base pairing between 8 and 15 UA pair}
assign (residue 15 and name h2)(residue 8 and name o2) 3.2 .1 .1
assign (residue 15 and name n1)(residue 8 and name h3) 1.9 .1 .1
assign (residue 15 and name h61)(residue 8 and name o4) 1.8 .1 .1
assign (residue 15 and name h2)(residue 8 and name h3) 2.9 .1 .1

 {base pairing between 9 and 14 CG pair}
assign (residue 9 and name h41)(residue 14 and name o6) 1.7 .1 .1
assign (residue 9 and name n3)(residue 14 and name h21) 3.0 .1 .1
assign (residue 9 and name o2)(residue 14 and name h21) 2.0 .1 .1
assign (residue 9 and name n3)(residue 14 and name h1) 1.9 .1 .1



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