NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id cing stage program type item_count
52378 2kgp cing 2-parsed STAR dipolar coupling 30


data_2kgp_MR_file_constraints


save_Conversion_project
    _Study_list.Sf_category  study_list 
    _Study_list.Entry_ID     parsed_2kgp 
    _Study_list.ID           1 

    loop_
        _Study.ID 
        _Study.Name 
        _Study.Type 
        _Study.Details 
        _Study.Entry_ID 
        _Study.Study_list_ID 

        1   "Conversion project"    NMR   .   parsed_2kgp   1   
    stop_

save_


save_entry_information
    _Entry.Sf_category                  entry_information 
    _Entry.ID                           parsed_2kgp 
    _Entry.Title                       "Original constraint list(s)" 
    _Entry.Version_type                 original 
    _Entry.Submission_date              . 
    _Entry.Accession_date               . 
    _Entry.Last_release_date            . 
    _Entry.Original_release_date        . 
    _Entry.Origination                  . 
    _Entry.NMR_STAR_version             3.1 
    _Entry.Original_NMR_STAR_version    . 
    _Entry.Experimental_method          NMR 
    _Entry.Experimental_method_subtype  . 

    loop_
        _Related_entries.Database_name 
        _Related_entries.Database_accession_code 
        _Related_entries.Relationship 
        _Related_entries.Entry_ID 

        PDB   2kgp   "Master copy"    parsed_2kgp   
    stop_

save_


save_global_Org_file_characteristics
    _Constraint_stat_list.Sf_category  constraint_statistics 
    _Constraint_stat_list.Entry_ID     parsed_2kgp 
    _Constraint_stat_list.ID           1 

    loop_
        _Constraint_file.ID 
        _Constraint_file.Constraint_filename 
        _Constraint_file.Software_ID 
        _Constraint_file.Software_label 
        _Constraint_file.Software_name 
        _Constraint_file.Block_ID 
        _Constraint_file.Constraint_type 
        _Constraint_file.Constraint_subtype 
        _Constraint_file.Constraint_subsubtype 
        _Constraint_file.Constraint_number 
        _Constraint_file.Entry_ID 
        _Constraint_file.Constraint_stat_list_ID 

        1   2kgp.mr   .   .   "MR format"    1    comment                  "Not applicable"    "Not applicable"     0   parsed_2kgp   1   
        1   2kgp.mr   .   .    XPLOR/CNS     2   "dipolar coupling"        "Not applicable"    "Not applicable"    30   parsed_2kgp   1   
        1   2kgp.mr   .   .    XPLOR/CNS     3    distance                  NOE                 simple              0   parsed_2kgp   1   
        1   2kgp.mr   .   .    XPLOR/CNS     4    distance                 "hydrogen bond"      simple              0   parsed_2kgp   1   
        1   2kgp.mr   .   .    XPLOR/CNS     5    planarity                "Not applicable"    "Not applicable"     0   parsed_2kgp   1   
        1   2kgp.mr   .   .    XPLOR/CNS     6   "dihedral angle"          "Not applicable"    "Not applicable"     0   parsed_2kgp   1   
        1   2kgp.mr   .   .   "MR format"    7   "nomenclature mapping"    "Not applicable"    "Not applicable"     0   parsed_2kgp   1   
    stop_

save_


save_CNS/XPLOR_dipolar_coupling_2
    _RDC_constraint_list.Sf_category         RDC_constraints 
    _RDC_constraint_list.Entry_ID            parsed_2kgp 
    _RDC_constraint_list.ID                  1 
    _RDC_constraint_list.Constraint_file_ID  1 
    _RDC_constraint_list.Block_ID            2 
    _RDC_constraint_list.Details            "Generated by Wattos" 

    loop_
        _RDC_constraint.ID 
        _RDC_constraint.Assembly_atom_ID_1 
        _RDC_constraint.Entity_assembly_ID_1 
        _RDC_constraint.Entity_ID_1 
        _RDC_constraint.Comp_index_ID_1 
        _RDC_constraint.Seq_ID_1 
        _RDC_constraint.Comp_ID_1 
        _RDC_constraint.Atom_ID_1 
        _RDC_constraint.Resonance_ID_1 
        _RDC_constraint.Assembly_atom_ID_2 
        _RDC_constraint.Entity_assembly_ID_2 
        _RDC_constraint.Entity_ID_2 
        _RDC_constraint.Comp_index_ID_2 
        _RDC_constraint.Seq_ID_2 
        _RDC_constraint.Comp_ID_2 
        _RDC_constraint.Atom_ID_2 
        _RDC_constraint.Resonance_ID_2 
        _RDC_constraint.RDC_val 
        _RDC_constraint.RDC_lower_bound 
        _RDC_constraint.RDC_upper_bound 
        _RDC_constraint.RDC_val_err 
        _RDC_constraint.Source_experiment_ID 
        _RDC_constraint.Auth_asym_ID_1 
        _RDC_constraint.Auth_seq_ID_1 
        _RDC_constraint.Auth_comp_ID_1 
        _RDC_constraint.Auth_atom_ID_1 
        _RDC_constraint.Auth_asym_ID_2 
        _RDC_constraint.Auth_seq_ID_2 
        _RDC_constraint.Auth_comp_ID_2 
        _RDC_constraint.Auth_atom_ID_2 
        _RDC_constraint.Entry_ID 
        _RDC_constraint.RDC_constraint_list_ID 

         1   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   19.0000    .   .   .   .   .   10   .   C2    .   10   .   H2    parsed_2kgp   1   
         2   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   13.5000    .   .   .   .   .   21   .   C2    .   21   .   H2    parsed_2kgp   1   
         3   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   17.0000    .   .   .   .   .   19   .   C2    .   19   .   H2    parsed_2kgp   1   
         4   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   18.0000    .   .   .   .   .    9   .   C8    .    9   .   H8    parsed_2kgp   1   
         5   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .    9.0000    .   .   .   .   .    7   .   C8    .    7   .   H8    parsed_2kgp   1   
         6   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   11.0000    .   .   .   .   .   23   .   C8    .   23   .   H8    parsed_2kgp   1   
         7   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   14.0000    .   .   .   .   .    5   .   C8    .    5   .   H8    parsed_2kgp   1   
         8   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .    9.0000    .   .   .   .   .   10   .   C8    .   10   .   H8    parsed_2kgp   1   
         9   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   -0.5000    .   .   .   .   .    2   .   C8    .    2   .   H8    parsed_2kgp   1   
        10   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .    4.00000   .   .   .   .   .   19   .   C8    .   19   .   H8    parsed_2kgp   1   
        11   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   14.00000   .   .   .   .   .   21   .   C8    .   21   .   H8    parsed_2kgp   1   
        12   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   12.50000   .   .   .   .   .   16   .   C6    .   16   .   H6    parsed_2kgp   1   
        13   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   10.00000   .   .   .   .   .   20   .   C6    .   20   .   H6    parsed_2kgp   1   
        14   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .    3.50000   .   .   .   .   .   24   .   C6    .   24   .   H6    parsed_2kgp   1   
        15   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   16.50000   .   .   .   .   .   18   .   C6    .   18   .   H6    parsed_2kgp   1   
        16   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   13.00000   .   .   .   .   .    6   .   C6    .    6   .   H6    parsed_2kgp   1   
        17   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   12.50000   .   .   .   .   .    8   .   C6    .    8   .   H6    parsed_2kgp   1   
        18   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .    0.50000   .   .   .   .   .   25   .   C6    .   25   .   H6    parsed_2kgp   1   
        19   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   -3.00000   .   .   .   .   .   17   .   C6    .   17   .   H6    parsed_2kgp   1   
        20   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .    9.50000   .   .   .   .   .   17   .   C5    .   17   .   H5    parsed_2kgp   1   
        21   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .    7.50000   .   .   .   .   .    6   .   C5    .    6   .   H5    parsed_2kgp   1   
        22   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .    5.00000   .   .   .   .   .   24   .   C5    .   24   .   H5    parsed_2kgp   1   
        23   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .    4.50000   .   .   .   .   .   25   .   C5    .   25   .   H5    parsed_2kgp   1   
        24   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   -2.50000   .   .   .   .   .   18   .   C5    .   18   .   H5    parsed_2kgp   1   
        25   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .    5.50000   .   .   .   .   .   24   .   C5    .   24   .   H5    parsed_2kgp   1   
        26   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   14.50000   .   .   .   .   .    5   .   C1'   .    5   .   H1'   parsed_2kgp   1   
        27   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   10.50000   .   .   .   .   .   22   .   C1'   .   22   .   H1'   parsed_2kgp   1   
        28   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   -9.00000   .   .   .   .   .    6   .   C1'   .    6   .   H1'   parsed_2kgp   1   
        29   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   -0.50000   .   .   .   .   .   21   .   C1'   .   21   .   H1'   parsed_2kgp   1   
        30   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .    8.00000   .   .   .   .   .    9   .   C1'   .    9   .   H1'   parsed_2kgp   1   
    stop_


    loop_
        _RDC_constraint_comment_org.ID 
        _RDC_constraint_comment_org.Comment_text 
        _RDC_constraint_comment_org.Comment_begin_line 
        _RDC_constraint_comment_org.Comment_begin_column 
        _RDC_constraint_comment_org.Comment_end_line 
        _RDC_constraint_comment_org.Comment_end_column 
        _RDC_constraint_comment_org.Entry_ID 
        _RDC_constraint_comment_org.RDC_constraint_list_ID 

         1   
;
dip2rand.nawk Table; Output File: dip_70.tbl
FractRand: 0.70;  NO-Overlap
SEED: 54001124
Mean ABS(Measure):  13.4789  Mean SumSquare: 225.0152  Count:   71
Date: Mon Jun 24 11:00:54 EDT 2002
Path: /net/octave1/clore/RNA_THEO/PAIRS/TEST

A+4:H2
;
     1   1     8    8   parsed_2kgp   1   
         2    A+15:H2           16   1    16    9   parsed_2kgp   1   
         3    A+13:H2           24   1    24    9   parsed_2kgp   1   
         4   
;
C8-H8 and C6-H6
G+3 H8
;
    32   1    34    9   parsed_2kgp   1   
         5   "G+1 H8"           42   1    42    9   parsed_2kgp   1   
         6   "G+17 H8"          50   1    50    9   parsed_2kgp   1   
         7   "G-1 H8"           58   1    58    9   parsed_2kgp   1   
         8   "A+4 H8"           66   1    66    9   parsed_2kgp   1   
         9   "G-4 H8"           74   1    74    9   parsed_2kgp   1   
        10   "A+13 H8"          82   1    82   10   parsed_2kgp   1   
        11   "A+15 H8"          90   1    90   10   parsed_2kgp   1   
        12    C+16:H6(ol)       98   1    98   13   parsed_2kgp   1   
        13    C+14:H6          106   1   106   10   parsed_2kgp   1   
        14    U+18:H6          114   1   114    9   parsed_2kgp   1   
        15    C+12:H6(diff)    122   1   122   16   parsed_2kgp   1   
        16    U0:H6(ol)        130   1   130   12   parsed_2kgp   1   
        17    U+2:H6(ol)       138   1   138   13   parsed_2kgp   1   
        18    C+19:H6          146   1   146   10   parsed_2kgp   1   
        19    U+11:H6          154   1   154   10   parsed_2kgp   1   
        20    U+11:H5          162   1   162    9   parsed_2kgp   1   
        21   "U0:H5 (care)"    170   1   170   14   parsed_2kgp   1   
        22    U+18:1H5(ol)     178   1   178   14   parsed_2kgp   1   
        23    C+19:H5          186   1   186    9   parsed_2kgp   1   
        24    C+12:H5          194   1   194    9   parsed_2kgp   1   
        25    C+16:H5          202   1   202    9   parsed_2kgp   1   
        26   
;
C1'-H1'
G-1:H1'
;
   210   1   211    9   parsed_2kgp   1   
        27    C+16:H1'         218   1   218   10   parsed_2kgp   1   
        28    U0:H1'           225   1   225    8   parsed_2kgp   1   
        29    A+15:H1'(ol)     232   1   232   14   parsed_2kgp   1   
        30    G+3:H1'(ol)      239   1   239   13   parsed_2kgp   1   
    stop_

save_





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