NMR Restraints Grid |
Result table
image | mrblock_id | pdb_id | bmrb_id | cing | stage | program | type | subtype | subsubtype |
654205 | 6zle | 34526 | cing | 4-filtered-FRED | Wattos | check | completeness | distance |
data_6zle save_NOE_Completeness _NOE_completeness_stats.Sf_category NOE_completeness_statistics _NOE_completeness_stats.Model_count 20 _NOE_completeness_stats.Residue_count 157 _NOE_completeness_stats.Total_atom_count 2564 _NOE_completeness_stats.Observable_atom_definition ob_standard _NOE_completeness_stats.Observable_atom_count 921 _NOE_completeness_stats.Use_intra_residue_restraints no _NOE_completeness_stats.Redundancy_threshold_pct 5.0 _NOE_completeness_stats.Distance_averaging_power 1.00 _NOE_completeness_stats.Completeness_cutoff 4.00 _NOE_completeness_stats.Completeness_cumulative_pct 45.3 _NOE_completeness_stats.Constraint_unexpanded_count 2749 _NOE_completeness_stats.Constraint_count 2749 _NOE_completeness_stats.Constraint_exp_unfiltered_count 2453 _NOE_completeness_stats.Constraint_exceptional_count 0 _NOE_completeness_stats.Constraint_nonobservable_count 0 _NOE_completeness_stats.Constraint_intraresidue_count 634 _NOE_completeness_stats.Constraint_surplus_count 156 _NOE_completeness_stats.Constraint_observed_count 1959 _NOE_completeness_stats.Constraint_expected_count 2321 _NOE_completeness_stats.Constraint_matched_count 1052 _NOE_completeness_stats.Constraint_unmatched_count 907 _NOE_completeness_stats.Constraint_exp_nonobs_count 1269 _NOE_completeness_stats.Details ; A detailed methodology description is available at: http://nmr.cmbi.ru.nl/~jd/wattos/doc/Wattos/Soup/Constraint/dc_completeness.html Please note that the contributions in ambiguous restraints are considered separate 'restraints' for the sets defined below. The cut off for all statistics except those in the by-shell table is given below by the above tag: _NOE_completeness_stats.Completeness_cutoff Description of the tags in this list: * 1 * Administrative tag * 2 * Administrative tag * 3 * Administrative tag * 4 * Number of models * 5 * Number of residues * 6 * Number of atoms * 7 * Standard set name of observable atom definitions see: Doreleijers et al., J.Biomol.NMR 14, 123-132 (1999). * 8 * Observable atom(group)s * 9 * Include intra residue restraints * 10 * Surplus threshold for determining redundant restraints * 11 * Power for averaging the distance over models * 12 * Up to what distance are NOEs expected * 13 * Cumulative completeness percentage * 14 * Number of unexpanded restraints in restraint list. * 15 * Number of restraints in restraint list. Set U * 16 * Expected restraints based on criteria in list. Set V Set V differs from set B only if intra residue restraints are analyzed. * 17 * Exceptional restraints, i.e. with an unknown atom.Set E * 18 * Not observable NOEs with e.g. hydroxyl Ser HG. Set O Even though restraints with these atom types might have been observed they are excluded from the analysis. * 19 * Intra-residue restraints if not to be analyzed. Set I * 20 * Surplus like double restraints. Set S * 21 * Observed restraints. Set A = U - (E u O u I u S) * 22 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 23 * Observed restraints matched to the expected. Set M = A n B * 24 * Observed restraints that were not expected. Set C = A - M * 25 * Expected restraints that were not observed. Set D = B - M * 26 * This tag Description of the tags in the class table: * 1 * Class of restraint. Note that 'medium-range' involves (2<=i<=4) contacts. Possible values are: intraresidue,sequential,medium-range,long-range, and intermolecular. * 2 * Observed restraints. Set A = U - (E u O u I u S) * 3 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 4 * Observed restraints matched to the expected. Set M = A n B * 5 * Completeness percentage * 6 * Standard deviation from the average over the classes. * 7 * Extra information * 8 * Administrative tag * 9 * Administrative tag Description of the tags in the shell table. The first row shows the lower limit of the shells requested and The last row shows the total number of restraints over the shells. * 1 * Description of the content of the row: edges, shell, or sums. The value determines the meaning of the values to the nine 'Matched_shell_x' tags among others. * 2 * Lower limit of shell of expected restraints. * 3 * Upper limit of shell of expected restraints. * 4 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 5 * Observed restraints matched to the expected. Set M = A n B * 6 * Matched restraints with experimental distance in shell 1 * 7 * Matched restraints with experimental distance in shell 2 * 8 * Matched restraints with experimental distance in shell 3 * 9 * Matched restraints with experimental distance in shell 4 * 10 * Matched restraints with experimental distance in shell 5 * 11 * Matched restraints with experimental distance in shell 6 * 12 * Matched restraints with experimental distance in shell 7 * 13 * Matched restraints with experimental distance in shell 8 * 14 * Matched restraints with experimental distance in shell 9 * 15 * Matched restraints overflowing the last shell * 16 * Completeness percentage for this shell * 17 * Completeness percentage up to upper limit of this shell * 18 * Administrative tag * 19 * Administrative tag Description of the tags in the residue table: * 1 * Chain identifier * 2 * Residue number * 3 * Residue name * 4 * Observable atom(group)s for this residue. * 5 * Observed restraints. Set A = U - (E u O u I u S) * 6 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 7 * Observed restraints matched to the expected. Set M = A n B * 8 * Completeness percentage * 9 * Standard deviation from the average over the residues. * 10 * Extra information * 11 * Administrative tag * 12 * Administrative tag ; loop_ _NOE_completeness_class.Type _NOE_completeness_class.Constraint_observed_count _NOE_completeness_class.Constraint_expected_count _NOE_completeness_class.Constraint_matched_count _NOE_completeness_class.Completeness_cumulative_pct _NOE_completeness_class.Std_dev _NOE_completeness_class.Details intraresidue 0 0 0 . . "no intras" sequential 609 836 355 42.5 -1.0 >sigma medium-range 747 725 341 47.0 0.5 . long-range 603 760 356 46.8 0.5 . intermolecular 0 0 0 . . "no multimer" stop_ loop_ _NOE_completeness_shell.Type _NOE_completeness_shell.Shell_start _NOE_completeness_shell.Shell_end _NOE_completeness_shell.Constraint_expected_count _NOE_completeness_shell.Constraint_matched_count _NOE_completeness_shell.Matched_shell_1 _NOE_completeness_shell.Matched_shell_2 _NOE_completeness_shell.Matched_shell_3 _NOE_completeness_shell.Matched_shell_4 _NOE_completeness_shell.Matched_shell_5 _NOE_completeness_shell.Matched_shell_6 _NOE_completeness_shell.Matched_shell_7 _NOE_completeness_shell.Matched_shell_8 _NOE_completeness_shell.Matched_shell_9 _NOE_completeness_shell.Matched_shell_overflow _NOE_completeness_shell.Completeness_shell_pct _NOE_completeness_shell.Completeness_cumulative_pct edges . . . . 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 . . . . shell 0.00 2.00 23 20 0 3 7 2 7 1 0 0 . 0 87.0 87.0 shell 2.00 2.50 199 142 0 7 39 56 30 9 1 0 . 0 71.4 73.0 shell 2.50 3.00 421 271 0 3 50 147 49 21 1 0 . 0 64.4 67.3 shell 3.00 3.50 632 273 0 0 27 99 90 44 12 1 . 0 43.2 55.4 shell 3.50 4.00 1046 346 0 0 4 55 158 96 23 10 . 0 33.1 45.3 shell 4.00 4.50 1563 387 0 0 1 7 93 186 77 23 . 0 24.8 37.0 shell 4.50 5.00 2183 294 0 0 0 0 14 99 141 40 . 0 13.5 28.6 shell 5.00 5.50 2733 168 0 0 0 0 3 18 68 79 . 0 6.1 21.6 shell 5.50 6.00 3345 54 0 0 0 0 1 2 20 31 . 0 1.6 16.1 shell 6.00 6.50 3515 4 0 0 0 0 0 0 3 1 . 0 0.1 12.5 shell 6.50 7.00 3948 0 0 0 0 0 0 0 0 0 . 0 0.0 10.0 shell 7.00 7.50 4271 0 0 0 0 0 0 0 0 0 . 0 0.0 8.2 shell 7.50 8.00 4778 0 0 0 0 0 0 0 0 0 . 0 0.0 6.8 shell 8.00 8.50 5235 0 0 0 0 0 0 0 0 0 . 0 0.0 5.8 shell 8.50 9.00 5465 0 0 0 0 0 0 0 0 0 . 0 0.0 5.0 sums . . 39357 1959 0 13 128 366 445 476 346 185 . 0 . . stop_ loop_ _NOE_completeness_comp.Entity_assembly_ID _NOE_completeness_comp.Comp_index_ID _NOE_completeness_comp.Comp_ID _NOE_completeness_comp.Obs_atom_count _NOE_completeness_comp.Constraint_observed_count _NOE_completeness_comp.Constraint_expected_count _NOE_completeness_comp.Constraint_matched_count _NOE_completeness_comp.Completeness_cumulative_pct _NOE_completeness_comp.Std_dev _NOE_completeness_comp.Details 1 1 GLY 3 0 2 0 0.0 -2.4 >sigma 1 2 SER 4 3 7 1 14.3 -1.6 >sigma 1 3 PRO 5 10 22 4 18.2 -1.4 >sigma 1 4 GLY 3 4 15 2 13.3 -1.7 >sigma 1 5 GLU 5 7 14 5 35.7 -0.4 . 1 6 ASN 6 27 28 16 57.1 0.8 . 1 7 LEU 7 36 49 22 44.9 0.1 . 1 8 LYS 7 27 33 16 48.5 0.3 . 1 9 HIS 6 29 27 14 51.9 0.5 . 1 10 ILE 6 40 57 24 42.1 -0.1 . 1 11 ILE 6 44 53 28 52.8 0.5 . 1 12 THR 4 22 19 13 68.4 1.4 >sigma 1 13 LEU 7 45 51 26 51.0 0.4 . 1 14 GLY 3 26 30 17 56.7 0.8 . 1 15 GLN 7 35 34 21 61.8 1.1 >sigma 1 16 VAL 5 27 34 16 47.1 0.2 . 1 17 ILE 6 55 67 35 52.2 0.5 . 1 18 HIS 6 42 35 23 65.7 1.3 >sigma 1 19 LYS 7 26 25 14 56.0 0.7 . 1 20 ARG 7 22 38 12 31.6 -0.6 . 1 21 CYS 4 28 26 14 53.8 0.6 . 1 22 GLU 5 21 15 10 66.7 1.3 >sigma 1 23 GLU 5 12 16 5 31.3 -0.7 . 1 24 MET 6 49 56 23 41.1 -0.1 . 1 25 LYS 7 19 18 10 55.6 0.7 . 1 26 TYR 6 53 56 30 53.6 0.6 . 1 27 CYS 4 19 18 7 38.9 -0.2 . 1 28 LYS 7 30 72 15 20.8 -1.3 >sigma 1 29 LYS 7 12 23 7 30.4 -0.7 . 1 30 GLN 7 15 29 9 31.0 -0.7 . 1 31 CYS 4 12 22 7 31.8 -0.6 . 1 32 ARG 7 12 26 8 30.8 -0.7 . 1 33 ARG 7 8 16 5 31.3 -0.7 . 1 34 LEU 7 49 57 28 49.1 0.3 . 1 35 GLY 3 31 27 18 66.7 1.3 >sigma 1 36 HIS 6 25 24 13 54.2 0.6 . 1 37 ARG 7 13 17 4 23.5 -1.1 >sigma 1 38 VAL 5 43 64 26 40.6 -0.1 . 1 39 LEU 7 72 60 39 65.0 1.2 >sigma 1 40 GLY 3 12 18 5 27.8 -0.9 . 1 41 LEU 7 56 52 25 48.1 0.3 . 1 42 ILE 6 58 72 32 44.4 0.1 . 1 43 LYS 7 26 34 13 38.2 -0.3 . 1 44 PRO 5 28 31 20 64.5 1.2 >sigma 1 45 LEU 7 48 46 25 54.3 0.6 . 1 46 GLU 5 21 22 13 59.1 0.9 . 1 47 MET 6 11 16 6 37.5 -0.3 . 1 48 LEU 7 16 34 9 26.5 -0.9 . 1 49 GLN 7 37 47 26 55.3 0.7 . 1 50 ASP 4 10 14 3 21.4 -1.2 >sigma 1 51 GLN 7 19 17 7 41.2 -0.1 . 1 52 GLY 3 5 9 2 22.2 -1.2 >sigma 1 53 LYS 7 9 11 1 9.1 -1.9 >sigma 1 54 ARG 7 9 9 3 33.3 -0.5 . 1 55 SER 4 13 9 6 66.7 1.3 >sigma 1 56 VAL 5 9 9 6 66.7 1.3 >sigma 1 57 PRO 5 8 26 7 26.9 -0.9 . 1 58 SER 4 5 16 4 25.0 -1.0 >sigma 1 59 GLU 5 8 10 3 30.0 -0.7 . 1 60 LYS 7 12 24 10 41.7 -0.1 . 1 61 LEU 7 23 43 16 37.2 -0.3 . 1 62 THR 4 34 27 19 70.4 1.5 >sigma 1 63 THR 4 23 24 15 62.5 1.1 >sigma 1 64 ALA 3 32 31 19 61.3 1.0 >sigma 1 65 MET 6 54 44 30 68.2 1.4 >sigma 1 66 ASN 6 29 29 16 55.2 0.7 . 1 67 ARG 7 27 46 15 32.6 -0.6 . 1 68 PHE 7 53 65 31 47.7 0.3 . 1 69 LYS 7 49 47 25 53.2 0.6 . 1 70 ALA 3 17 21 8 38.1 -0.3 . 1 71 ALA 3 42 39 19 48.7 0.3 . 1 72 LEU 7 65 71 35 49.3 0.4 . 1 73 GLU 5 25 23 11 47.8 0.3 . 1 74 GLU 5 29 32 13 40.6 -0.1 . 1 75 ALA 3 43 37 22 59.5 0.9 . 1 76 ASN 6 41 41 18 43.9 0.0 . 1 77 GLY 3 11 13 4 30.8 -0.7 . 1 78 GLU 5 16 37 7 18.9 -1.4 >sigma 1 79 ILE 6 51 67 27 40.3 -0.2 . 1 80 GLU 5 12 27 6 22.2 -1.2 >sigma 1 81 LYS 7 13 15 4 26.7 -0.9 . 1 82 PHE 7 29 58 16 27.6 -0.9 . 1 83 SER 4 10 15 5 33.3 -0.5 . 1 84 ASN 6 6 18 3 16.7 -1.5 >sigma 1 85 ARG 7 5 18 2 11.1 -1.8 >sigma 1 86 SER 4 5 13 2 15.4 -1.6 >sigma 1 87 ASN 6 13 29 6 20.7 -1.3 >sigma 1 88 ILE 6 66 61 32 52.5 0.5 . 1 89 CYS 4 31 27 16 59.3 0.9 . 1 90 ARG 7 18 17 10 58.8 0.9 . 1 91 PHE 7 13 33 6 18.2 -1.4 >sigma 1 92 LEU 7 35 35 17 48.6 0.3 . 1 93 THR 4 15 17 6 35.3 -0.4 . 1 94 ALA 3 10 16 7 43.8 0.0 . 1 95 SER 4 8 13 5 38.5 -0.3 . 1 96 GLN 7 0 9 0 0.0 -2.4 >sigma 1 97 ASP 4 5 14 1 7.1 -2.0 >sigma 1 98 LYS 7 0 6 0 0.0 -2.4 >sigma 1 99 ILE 6 44 53 30 56.6 0.8 . 1 100 LEU 7 37 48 15 31.3 -0.7 . 1 101 PHE 7 52 70 25 35.7 -0.4 . 1 102 LYS 7 30 38 20 52.6 0.5 . 1 103 ASP 4 15 14 11 78.6 2.0 >sigma 1 104 VAL 5 64 58 40 69.0 1.5 >sigma 1 105 ASN 6 35 26 13 50.0 0.4 . 1 106 ARG 7 19 20 13 65.0 1.2 >sigma 1 107 LYS 7 33 48 20 41.7 -0.1 . 1 108 LEU 7 54 61 28 45.9 0.2 . 1 109 SER 4 38 23 16 69.6 1.5 >sigma 1 110 ASP 4 20 17 11 64.7 1.2 >sigma 1 111 VAL 5 50 52 26 50.0 0.4 . 1 112 TRP 10 86 72 48 66.7 1.3 >sigma 1 113 LYS 7 30 31 16 51.6 0.5 . 1 114 GLU 5 37 27 12 44.4 0.1 . 1 115 LEU 7 53 53 28 52.8 0.5 . 1 116 SER 4 31 28 15 53.6 0.6 . 1 117 LEU 7 27 19 8 42.1 -0.1 . 1 118 LEU 7 27 41 20 48.8 0.3 . 1 119 LEU 7 40 56 23 41.1 -0.1 . 1 120 GLN 7 20 26 10 38.5 -0.3 . 1 121 VAL 5 20 24 13 54.2 0.6 . 1 122 GLU 5 7 24 5 20.8 -1.3 >sigma 1 123 GLN 7 16 39 9 23.1 -1.1 >sigma 1 124 ARG 7 2 9 2 22.2 -1.2 >sigma 1 125 MET 6 32 37 21 56.8 0.8 . 1 126 PRO 5 11 6 5 83.3 2.3 >sigma 1 127 VAL 5 32 37 17 45.9 0.2 . 1 128 SER 4 19 15 8 53.3 0.6 . 1 129 PRO 5 8 9 2 22.2 -1.2 >sigma 1 130 ILE 6 45 46 25 54.3 0.6 . 1 131 SER 4 12 12 4 33.3 -0.5 . 1 132 GLN 7 11 13 4 30.8 -0.7 . 1 133 GLY 3 0 8 0 0.0 -2.4 >sigma 1 134 ALA 3 4 11 2 18.2 -1.4 >sigma 1 135 SER 4 11 14 6 42.9 -0.0 . 1 136 TRP 10 32 28 13 46.4 0.2 . 1 137 ALA 3 20 22 10 45.5 0.1 . 1 138 GLN 7 22 21 12 57.1 0.8 . 1 139 GLU 5 13 13 5 38.5 -0.3 . 1 140 ASP 4 27 20 15 75.0 1.8 >sigma 1 141 GLN 7 33 31 17 54.8 0.7 . 1 142 GLN 7 13 15 4 26.7 -0.9 . 1 143 ASP 4 15 18 8 44.4 0.1 . 1 144 ALA 3 29 25 14 56.0 0.7 . 1 145 ASP 4 14 14 7 50.0 0.4 . 1 146 GLU 5 9 14 5 35.7 -0.4 . 1 147 ASP 4 17 23 10 43.5 0.0 . 1 148 ARG 7 26 24 15 62.5 1.1 >sigma 1 149 ARG 7 9 16 3 18.8 -1.4 >sigma 1 150 ALA 3 23 17 11 64.7 1.2 >sigma 1 151 PHE 7 44 54 27 50.0 0.4 . 1 152 GLN 7 20 31 9 29.0 -0.8 . 1 153 MET 6 12 23 10 43.5 0.0 . 1 154 LEU 7 22 33 15 45.5 0.1 . 1 155 ARG 7 8 15 6 40.0 -0.2 . 1 156 ARG 7 5 9 5 55.6 0.7 . 1 157 ASP 4 5 5 5 100.0 3.2 >sigma stop_ save_
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