NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
652226 6uf2 30676 cing 4-filtered-FRED Wattos check stereo assignment distance


data_6uf2


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        39
    _Stereo_assign_list.Swap_count           1
    _Stereo_assign_list.Swap_percentage      2.6
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          10
    _Stereo_assign_list.Total_e_low_states   1.696
    _Stereo_assign_list.Total_e_high_states  64.732
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1   3 ILE QG  8 no   20.0  69.5  0.235  0.338 0.103  9 0 no 0.847 0 1 
       1   6 LEU QD 17 no  100.0  99.9  6.704  6.712 0.008  6 0 no 0.128 0 0 
       1   7 VAL QG 28 no  100.0  96.1  3.738  3.891 0.153  3 0 no 0.435 0 0 
       1  10 ASP QB 39 no  100.0  98.2  2.973  3.028 0.055  1 0 no 0.282 0 0 
       1  14 VAL QG 16 no  100.0  98.4  0.618  0.629 0.010  6 0 no 0.134 0 0 
       1  16 LEU QD  2 no  100.0 100.0  8.355  8.355 0.000 14 1 no 0.008 0 0 
       1  34 LEU QD 15 no  100.0   0.0  0.000  0.000 0.000  6 0 no 0.000 0 0 
       1  36 LEU QD  7 no  100.0  92.3  1.161  1.259 0.097  9 0 no 0.408 0 0 
       1  39 GLY QA 14 no  100.0  99.8  1.087  1.088 0.002  6 0 no 0.092 0 0 
       1  42 ILE QG  1 no  100.0  78.9  0.292  0.370 0.078 16 0 no 0.487 0 0 
       1  44 GLY QA 25 no  100.0   0.0  0.000  0.000 0.000  4 0 no 0.000 0 0 
       1  48 VAL QG 24 no  100.0 100.0  2.104  2.104 0.000  4 0 no 0.000 0 0 
       1  50 GLY QA 20 no   90.0  79.5  0.033  0.042 0.009  5 0 no 0.200 0 0 
       1  51 GLY QA 34 no  100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  54 ILE QG 12 no  100.0   0.0  0.000  0.000 0.000  7 0 no 0.000 0 0 
       1  57 VAL QG 19 no  100.0 100.0  2.186  2.186 0.000  5 0 no 0.000 0 0 
       1  62 VAL QG  9 no  100.0 100.0  0.554  0.554 0.000  9 1 no 0.001 0 0 
       1  65 LEU QD 33 no  100.0  99.4  0.538  0.541 0.003  2 0 no 0.138 0 0 
       1  74 LEU QD  6 no  100.0  98.4  4.947  5.025 0.078  9 0 no 0.380 0 0 
       1  77 ASN QB 27 no   50.0 100.0  0.011  0.011 0.000  3 0 no 0.000 0 0 
       1  78 ASN QB 26 no  100.0  93.9  0.331  0.353 0.022  3 0 no 0.184 0 0 
       1  82 LEU QD 18 no  100.0  99.6 10.431 10.469 0.037  5 0 no 0.195 0 0 
       1  84 TYR QB 32 no  100.0 100.0  0.083  0.083 0.000  2 0 no 0.328 0 0 
       1  84 TYR QE 38 no  100.0  32.7  0.058  0.178 0.120  1 0 no 0.357 0 0 
       1  87 LEU QD  4 no  100.0  96.9  1.590  1.640 0.050 10 0 no 0.158 0 0 
       1  88 LEU QD 37 no  100.0  99.6  2.768  2.779 0.012  1 0 no 0.188 0 0 
       1  90 ASN QB 31 no   30.0  49.9  0.028  0.056 0.028  2 0 no 0.251 0 0 
       1  94 LEU QD  3 no  100.0  80.7  0.769  0.953 0.184 10 0 no 0.494 0 0 
       1  97 LEU QD 11 no  100.0  99.7  6.317  6.336 0.020  8 0 no 0.180 0 0 
       1  98 ILE QG 10 no   60.0   7.5  0.035  0.471 0.436  8 0 no 0.473 0 0 
       1 101 LEU QD 30 no   90.0  82.0  0.412  0.503 0.090  2 0 no 0.364 0 0 
       1 103 GLY QA 23 no  100.0   0.0  0.000  0.000 0.000  4 0 no 0.000 0 0 
       1 109 LYS QE  5 no    0.0   0.0  0.000  0.072 0.072  9 0 no 0.346 0 0 
       1 114 GLY QA 13 yes 100.0 100.0  0.194  0.194 0.000  6 0 no 0.000 0 0 
       1 116 PHE QE 36 no  100.0   0.0  0.000  0.000 0.000  1 0 no 0.000 0 0 
       1 120 LEU QD 22 no  100.0  99.5  4.289  4.312 0.023  4 0 no 0.278 0 0 
       1 121 LEU QD 29 no  100.0  89.9  0.054  0.060 0.006  2 0 no 0.094 0 0 
       1 122 GLY QA 21 no  100.0 100.0  0.140  0.140 0.000  4 0 no 0.000 0 0 
       1 123 TYR QE 35 no  100.0   0.0  0.000  0.000 0.000  1 0 no 0.000 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Sunday, May 12, 2024 2:19:56 AM GMT (wattos1)