NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
650667 6y6m 34493 cing 4-filtered-FRED Wattos check stereo assignment distance


data_6y6m


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        114
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.226
    _Stereo_assign_list.Total_e_high_states  38.724
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1   5 GLU QB 113 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1   8 GLU QB 112 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.085 0 0 
       1  10 GLY QA  63 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.058 0 0 
       1  11 ILE QG  62 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.000 0 0 
       1  12 ILE QG 111 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  13 GLU QG 110 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  14 LYS QB 109 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.054 0 0 
       1  15 LEU QB  46 no 100.0   0.0  0.000  0.000 0.000  6 4 no 0.000 0 0 
       1  15 LEU QD  15 no 100.0   0.0  0.000  0.000 0.000 10 4 no 0.053 0 0 
       1  16 LEU QB  45 no 100.0   0.0  0.000  0.000 0.000  6 4 no 0.000 0 0 
       1  16 LEU QD  14 no 100.0   0.0  0.000  0.001 0.001 10 4 no 0.105 0 0 
       1  19 TYR QB 108 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.015 0 0 
       1  23 GLN QB  40 no 100.0   0.0  0.000  0.002 0.002  6 0 no 0.107 0 0 
       1  23 GLN QE 107 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  24 CYS QB 106 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.016 0 0 
       1  25 CYS QB 105 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  26 GLU QG 104 no 100.0   0.0  0.000  0.001 0.001  2 0 no 0.137 0 0 
       1  27 ARG QB  39 no 100.0   0.0  0.000  0.000 0.000  6 0 no 0.000 0 0 
       1  27 ARG QG 103 no 100.0   0.0  0.000  0.001 0.001  2 0 no 0.097 0 0 
       1  28 GLN QE 102 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  31 LEU QD  13 no   0.0   0.0  0.000  0.003 0.003 10 4 no 0.158 0 0 
       1  35 PHE QB 101 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  38 PHE QB  20 no 100.0   0.0  0.000  0.000 0.000  8 0 no 0.035 0 0 
       1  42 ILE QG 100 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  43 ASP QB  38 no 100.0   0.0  0.000  0.001 0.001  6 0 no 0.118 0 0 
       1  44 HIS QB  99 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  45 LEU QB  12 no 100.0   0.0  0.000  0.000 0.000 10 4 no 0.000 0 0 
       1  45 LEU QD   5 no   0.0   0.0  0.000  0.003 0.003 20 4 no 0.186 0 0 
       1  47 ILE QG  61 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.008 0 0 
       1  48 GLY QA  98 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.054 0 0 
       1  50 PRO QB  37 no 100.0 100.0  2.155  2.155 0.000  6 0 no 0.049 0 0 
       1  51 VAL QG  36 no 100.0   0.0  0.000  0.000 0.000  6 0 no 0.000 0 0 
       1  53 PHE QB  42 no 100.0   0.0  0.000  0.000 0.000  6 2 no 0.000 0 0 
       1  55 MET QB  19 no 100.0  96.7  0.578  0.598 0.019  8 0 no 0.222 0 0 
       1  55 MET QG  44 no 100.0   0.0  0.000  0.003 0.003  6 4 no 0.158 0 0 
       1  57 TYR QB  97 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  58 ASP QB  35 no 100.0   0.0  0.000  0.000 0.000  6 0 no 0.067 0 0 
       1  60 ARG QB  96 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.046 0 0 
       1  60 ARG QG  60 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.000 0 0 
       1  69 VAL QG   1 no 100.0 100.0 22.277 22.288 0.011 32 2 no 0.139 0 0 
       1  71 LYS QB  34 no 100.0   0.0  0.000  0.000 0.000  6 0 no 0.038 0 0 
       1  71 LYS QG  95 no 100.0   0.0  0.000  0.009 0.009  2 0 no 0.183 0 0 
       1  72 ILE QG  94 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  74 PRO QD  59 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.000 0 0 
       1  76 VAL QG  33 no 100.0   0.0  0.000  0.004 0.004  6 0 no 0.144 0 0 
       1  77 VAL QG  93 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.078 0 0 
       1  78 LEU QD  32 no 100.0   0.0  0.000  0.001 0.001  6 0 no 0.114 0 0 
       1  79 SER QB  92 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  80 GLU QB  91 no 100.0   0.0  0.000  0.001 0.001  2 0 no 0.129 0 0 
       1  80 GLU QG  90 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  81 GLU QB  58 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.000 0 0 
       1  81 GLU QG  89 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.094 0 0 
       1  82 ARG QD  88 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  83 VAL QG   2 no 100.0  99.9  7.687  7.697 0.010 27 2 no 0.143 0 0 
       1  85 GLY QA  87 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  87 VAL QG   4 no 100.0   0.0  0.000  0.104 0.104 20 2 no 0.404 0 0 
       1  90 GLU QB  57 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.000 0 0 
       1  90 GLU QG  18 no 100.0   0.0  0.000  0.000 0.000  8 0 no 0.074 0 0 
       1  91 LEU QB  43 no 100.0   0.0  0.000  0.000 0.000  6 4 no 0.000 0 0 
       1  91 LEU QD   3 no 100.0   0.0  0.000  0.002 0.002 24 8 no 0.097 0 0 
       1  92 ARG QB  31 no 100.0   0.0  0.000  0.000 0.000  6 0 no 0.029 0 0 
       1  92 ARG QG  86 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  95 SER QB  56 no 100.0   0.0  0.000  0.008 0.008  4 0 no 0.282 0 0 
       1  97 ASN QB  85 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1  98 ASN QD  84 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1 100 LEU QB  83 no 100.0   0.0  0.000  0.007 0.007  2 0 no 0.143 0 0 
       1 100 LEU QD  82 no 100.0   0.0  0.000  0.001 0.001  2 0 no 0.082 0 0 
       1 103 SER QB  81 no 100.0   0.0  0.000  0.001 0.001  2 0 no 0.128 0 0 
       1 104 GLU QG  17 no 100.0   0.0  0.000  0.002 0.002  8 0 no 0.133 0 0 
       1 108 ARG QB  30 no 100.0   0.0  0.000  0.000 0.000  6 0 no 0.049 0 0 
       1 108 ARG QD  29 no 100.0   0.0  0.000  0.001 0.001  6 0 no 0.097 0 0 
       1 108 ARG QG  55 no 100.0   0.0  0.000  0.004 0.004  4 0 no 0.279 0 0 
       1 109 ILE QG   7 no 100.0  99.6  0.450  0.452 0.002 12 2 no 0.082 0 0 
       1 111 TYR QB  54 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.002 0 0 
       1 112 GLU QB  80 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1 112 GLU QG  79 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.042 0 0 
       1 114 ARG QG  53 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.019 0 0 
       1 116 GLU QB  28 no 100.0   0.0  0.000  0.000 0.000  6 0 no 0.067 0 0 
       1 116 GLU QG  52 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.086 0 0 
       1 119 PHE QB  78 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1 120 LEU QB  65 no 100.0   0.0  0.000  0.000 0.000  4 4 no 0.000 0 0 
       1 120 LEU QD   8 no   0.0   0.0  0.000  0.003 0.003 12 4 no 0.113 0 0 
       1 121 PRO QB  27 no 100.0   0.0  0.000  0.000 0.000  6 0 no 0.047 0 0 
       1 121 PRO QD  41 no 100.0 100.0  2.638  2.639 0.000  6 2 no 0.047 0 0 
       1 122 TYR QB  51 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.000 0 0 
       1 124 LYS QB  11 no 100.0   0.0  0.000  0.002 0.002 10 4 no 0.132 0 0 
       1 125 ASP QB  50 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.047 0 0 
       1 126 ASP QB  77 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1 127 VAL QG   6 no 100.0   0.0  0.000  0.003 0.003 16 4 no 0.108 0 0 
       1 130 ASN QB  76 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1 131 VAL QG  49 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.026 0 0 
       1 132 ASN QD  75 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1 133 LEU QB  24 no 100.0   0.0  0.000  0.000 0.000  8 4 no 0.023 0 0 
       1 133 LEU QD   9 no 100.0   0.0  0.000  0.000 0.000 12 8 no 0.067 0 0 
       1 134 ARG QB  48 no 100.0   0.0  0.000  0.000 0.000  4 0 no 0.000 0 0 
       1 136 GLY QA  74 no 100.0   0.0  0.000  0.002 0.002  2 0 no 0.095 0 0 
       1 137 ASP QB  23 no 100.0   0.0  0.000  0.002 0.002  8 4 no 0.123 0 0 
       1 138 LYS QE  73 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1 139 VAL QG  16 no 100.0   0.0  0.000  0.000 0.000  8 0 no 0.000 0 0 
       1 142 GLN QG  72 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1 143 ILE QG  21 no 100.0   0.0  0.000  0.000 0.000  8 2 no 0.091 0 0 
       1 146 ASN QB  71 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1 149 GLY QA  47 no 100.0  99.9  2.712  2.716 0.004  4 0 no 0.122 0 0 
       1 150 ASN QB  70 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1 151 LEU QB  64 no 100.0   0.0  0.000  0.000 0.000  4 4 no 0.000 0 0 
       1 151 LEU QD  22 no   0.0   0.0  0.000  0.001 0.001  8 4 no 0.077 0 0 
       1 152 GLY QA 114 no 100.0   0.0  0.000  0.000 0.000  2 2 no 0.014 0 0 
       1 154 CYS QB  26 no 100.0   0.0  0.000  0.001 0.001  6 0 no 0.073 0 0 
       1 157 ARG QD  69 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1 158 LEU QB  68 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.000 0 0 
       1 158 LEU QD  10 no 100.0   0.0  0.000  0.000 0.000 10 4 no 0.043 0 0 
       1 159 GLU QB  67 no 100.0   0.0  0.000  0.001 0.001  2 0 no 0.110 0 0 
       1 159 GLU QG  66 no 100.0   0.0  0.000  0.000 0.000  2 0 no 0.042 0 0 
       1 160 ASN QB  25 no 100.0   0.0  0.000  0.001 0.001  6 0 no 0.090 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Friday, May 10, 2024 6:36:33 PM GMT (wattos1)