NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image	mrblock_id	pdb_id	bmrb_id	cing	stage	program	type	subtype	subsubtype
	640239	6rro	34402	cing	4-filtered-FRED	Wattos	check	stereo assignment	distance

data_6rro


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        13
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       1
    _Stereo_assign_list.Deassign_percentage  7.7
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.492
    _Stereo_assign_list.Total_e_high_states  7.922
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  2 PHE QB 13 no  10.0  95.7 0.007 0.007 0.000  2 0 no  0.073 0  0 
       1  3 ILE QG 11 no  30.0 100.0 0.006 0.006 0.000  6 0 no  0.000 0  0 
       1  4 VAL QG  3 no 100.0 100.0 4.805 4.805 0.000  8 0 no  0.015 0  0 
       1  5 LYS QB 10 no  55.0  76.0 0.015 0.020 0.005  6 0 no  0.243 0  0 
       1  5 LYS QG  9 no  45.0  98.1 0.098 0.100 0.002  6 0 no  0.137 0  0 
       1  6 ARG QG 12 no  20.0  95.8 0.011 0.011 0.000  3 0 no  0.052 0  0 
       1  7 PHE QB  8 no 100.0 100.0 0.000 0.000 0.000  6 0 no  0.012 0  0 
       1  8 LYS QB  7 no  85.0  78.1 0.043 0.055 0.012  6 0 no  0.291 0  0 
       1  8 LYS QG  4 no  85.0 100.0 0.452 0.452 0.000  7 0 no  0.015 0  0 
       1  9 ILE QG  6 no 100.0 100.0 0.051 0.051 0.000  6 0 no  0.000 0  0 
       1 10 LEU QB  2 no 100.0  31.9 0.022 0.069 0.047 12 4 no  0.222 0  0 
       1 10 LEU QD  1 no 100.0  74.7 1.215 1.627 0.412 12 4 yes 0.752 0 14 
       1 11 VAL QG  5 no 100.0  98.3 0.705 0.718 0.013  6 0 no  0.295 0  0 
    stop_

save_

Contact the webmaster for help, if required. Saturday, May 11, 2024 11:19:58 PM GMT (wattos1)