NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
606237 5l3m 34001 cing 4-filtered-FRED Wattos check stereo assignment distance


data_5l3m


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        70
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.164
    _Stereo_assign_list.Total_e_high_states  86.807
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  2 TYR QB 62 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.039 0 0 
       1  3 ARG QB 11 no 100.0   0.0  0.000  0.000 0.000 12  4 no 0.020 0 0 
       1  4 PRO QB 61 no 100.0 100.0  0.512  0.512 0.000  4  0 no 0.038 0 0 
       1  4 PRO QD 15 no 100.0   0.0  0.000  0.000 0.000 10  4 no 0.021 0 0 
       1  6 GLU QB 36 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.035 0 0 
       1  8 LEU QB  9 no 100.0 100.0  1.022  1.023 0.000 14  4 no 0.059 0 0 
       1  8 LEU QD  7 no 100.0   0.0  0.000  0.000 0.000 16  4 no 0.042 0 0 
       1  9 CYS QB 60 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 11 GLY QA 63 no 100.0   0.0  0.000  0.000 0.000  4  2 no 0.015 0 0 
       1 12 GLU QB 59 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 12 GLU QG 58 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.038 0 0 
       1 13 LEU QB 23 no 100.0   0.0  0.000  0.000 0.000  8  4 no 0.000 0 0 
       1 13 LEU QD  4 no  85.0   0.0  0.000  0.013 0.013 32 14 no 0.153 0 0 
       1 14 VAL QG  2 no 100.0 100.0 48.742 48.746 0.005 35 10 no 0.154 0 0 
       1 15 ASP QB 35 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1 17 LEU QB  8 no 100.0 100.0  1.571  1.571 0.000 14  4 no 0.000 0 0 
       1 17 LEU QD  1 no 100.0  99.6 26.345 26.445 0.100 61 20 no 0.357 0 0 
       1 18 GLN QB 34 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.005 0 0 
       1 18 GLN QE 70 no 100.0   0.0  0.000  0.000 0.000  2  2 no 0.000 0 0 
       1 18 GLN QG 13 no 100.0   0.0  0.000  0.000 0.000 10  2 no 0.009 0 0 
       1 19 PHE QB 57 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 20 VAL QG 10 no  80.0   0.0  0.000  0.002 0.002 12  0 no 0.088 0 0 
       1 21 CYS QB 56 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.012 0 0 
       1 23 ASP QB 55 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 24 ARG QB 33 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.010 0 0 
       1 24 ARG QG 32 no   0.0   0.0  0.000  0.000 0.000  6  0 no 0.031 0 0 
       1 25 GLY QA 69 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 26 PHE QB 39 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.025 0 0 
       1 27 TYR QB 54 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.005 0 0 
       1 28 PHE QB 53 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 29 SER QB 52 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.037 0 0 
       1 30 ARG QB 41 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.050 0 0 
       1 31 PRO QB 68 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.032 0 0 
       1 31 PRO QD 40 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.050 0 0 
       1 33 SER QB 38 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.038 0 0 
       1 34 ARG QB 31 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.024 0 0 
       1 35 VAL QG  5 no 100.0  99.9  2.260  2.263 0.003 19  2 no 0.116 0 0 
       1 36 SER QB 51 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 37 ARG QB 67 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.043 0 0 
       1 38 ARG QB 50 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 40 PRO QD 66 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 41 GLN QB 30 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.020 0 0 
       1 41 GLN QE 65 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 42 ARG QB 21 no   0.0   0.0  0.000  0.000 0.000  8  0 no 0.029 0 0 
       1 44 ILE QG 29 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1 45 VAL QG 20 no   0.0   0.0  0.000  0.000 0.000  8  0 no 0.029 0 0 
       1 46 GLU QB 49 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 46 GLU QG 19 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.000 0 0 
       1 47 GLU QB 48 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 47 GLU QG 28 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1 48 CYS QB 64 no 100.0   0.0  0.000  0.000 0.000  4  4 no 0.000 0 0 
       1 49 CYS QB 47 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 50 PHE QB 27 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.007 0 0 
       1 51 ARG QB 18 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.014 0 0 
       1 51 ARG QG 46 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.020 0 0 
       1 53 CYS QB 45 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.024 0 0 
       1 54 ASP QB 44 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.010 0 0 
       1 55 LEU QB 14 no 100.0 100.0  2.028  2.028 0.000 10  3 no 0.021 0 0 
       1 55 LEU QD 22 no 100.0   0.0  0.000  0.000 0.000  8  2 no 0.002 0 0 
       1 57 LEU QB 17 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.024 0 0 
       1 58 LEU QB 12 no 100.0   0.0  0.000  0.000 0.000 12  6 no 0.000 0 0 
       1 58 LEU QD  3 no 100.0   0.0  0.000  0.032 0.032 32 10 no 0.231 0 0 
       1 59 GLU QB  6 no 100.0 100.0  2.860  2.860 0.000 16  3 no 0.018 0 0 
       1 59 GLU QG 26 no   0.0   0.0  0.000  0.002 0.002  6  0 no 0.078 0 0 
       1 61 TYR QB 37 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.000 0 0 
       1 62 CYS QB 25 no 100.0   0.0  0.000  0.001 0.001  6  0 no 0.064 0 0 
       1 65 PRO QB 43 no 100.0 100.0  0.601  0.601 0.000  4  0 no 0.036 0 0 
       1 65 PRO QD 16 no 100.0   0.0  0.000  0.002 0.002  8  0 no 0.100 0 0 
       1 65 PRO QG 24 no 100.0 100.0  0.702  0.702 0.000  7  0 no 0.022 0 0 
       1 67 LYS QB 42 no   0.0   0.0  0.000  0.000 0.000  4  0 no 0.014 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Wednesday, May 29, 2024 12:00:31 PM GMT (wattos1)