NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
602130 2mdp 19498 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2mdp


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        34
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          10
    _Stereo_assign_list.Total_e_low_states   0.101
    _Stereo_assign_list.Total_e_high_states  16.671
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  9 LEU QD 14 no 100.0   0.0 0.000 0.000 0.000 10  0 no 0.000 0 0 
       1 19 LEU QD 24 no 100.0   0.0 0.000 0.000 0.000  4  2 no 0.000 0 0 
       1 21 GLN QB 17 no  60.0  99.1 0.043 0.043 0.000  8  2 no 0.061 0 0 
       1 22 LEU QB  5 no 100.0  99.7 2.200 2.206 0.007 18  8 no 0.142 0 0 
       1 22 LEU QD 10 no 100.0   0.0 0.000 0.000 0.000 12  6 no 0.000 0 0 
       1 24 LEU QB  7 no  90.0  99.2 0.609 0.614 0.005 13  4 no 0.172 0 0 
       1 24 LEU QD  2 no  70.0  99.9 0.232 0.232 0.000 25 13 no 0.031 0 0 
       1 26 VAL QG  8 no 100.0   0.0 0.000 0.010 0.010 12  0 no 0.296 0 0 
       1 27 ILE QG 23 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 29 ASP QB 33 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.020 0 0 
       1 41 ILE QG 32 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 43 LEU QB  9 no  90.0  99.8 1.150 1.152 0.002 12  4 no 0.120 0 0 
       1 43 LEU QD  1 no 100.0  99.3 2.043 2.057 0.014 31  4 no 0.163 0 0 
       1 44 ARG QD 22 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 45 ILE QG 12 no  80.0 100.0 0.123 0.123 0.000 11  0 no 0.004 0 0 
       1 47 ASP QB 31 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 49 SER QB 30 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 51 ASN QB 19 no 100.0   0.0 0.000 0.000 0.000  6  0 no 0.000 0 0 
       1 52 LEU QB 29 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 53 ILE QG  3 no 100.0  99.9 0.936 0.937 0.001 18  0 no 0.074 0 0 
       1 54 ASP QB 28 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.020 0 0 
       1 63 GLU QB 34 no 100.0   0.0 0.000 0.001 0.001  2  2 no 0.079 0 0 
       1 64 ASP QB 21 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 65 VAL QG 18 no  50.0  50.0 0.011 0.022 0.011  7  0 no 0.225 0 0 
       1 66 LEU QB  6 no 100.0  97.6 1.193 1.222 0.029 13  4 no 0.336 0 0 
       1 66 LEU QD 16 no 100.0   0.0 0.000 0.000 0.000  8  2 no 0.000 0 0 
       1 69 MET QG 11 no 100.0 100.0 0.414 0.414 0.000 11  0 no 0.000 0 0 
       1 70 CYS QB 27 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 72 ASP QB 26 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 74 LEU QD 20 no 100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 77 MET QG 13 no 100.0  99.6 2.355 2.365 0.009 11  3 no 0.231 0 0 
       1 78 TYR QB 15 no 100.0  99.6 2.244 2.253 0.009  8  2 no 0.191 0 0 
       1 81 LEU QD  4 no 100.0  99.9 3.018 3.020 0.002 18  6 no 0.125 0 0 
       1 83 ASP QB 25 no 100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Thursday, May 23, 2024 1:04:10 PM GMT (wattos1)