NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
601868 2mzj 19098 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2mzj


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        98
    _Stereo_assign_list.Swap_count           24
    _Stereo_assign_list.Swap_percentage      24.5
    _Stereo_assign_list.Deassign_count       12
    _Stereo_assign_list.Deassign_percentage  12.2
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   23.782
    _Stereo_assign_list.Total_e_high_states  155.784
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  2 ASN QD 65 no   95.0  99.9 0.926  0.927 0.000  7  1 no  0.073  0  0 
       1  5 ILE QG 50 no  100.0  98.5 0.465  0.472 0.007  8  0 no  0.088  0  0 
       1  6 VAL QG 13 no  100.0  99.7 6.996  7.018 0.022 15  3 no  0.017  0  0 
       1  7 PHE QB 25 yes  90.0  70.5 0.697  0.988 0.292 12  6 no  0.074  0  0 
       1  8 VAL QG  4 yes 100.0  99.9 4.531  4.533 0.002 21  6 no  0.112  0  0 
       1  9 GLY QA 16 no   60.0  31.3 0.415  1.327 0.912 14  1 yes 1.527 11 26 
       1 10 SER QB 23 yes 100.0  99.6 2.418  2.427 0.009 12  2 no  0.073  0  0 
       1 11 LEU QB 18 yes 100.0 100.0 4.018  4.018 0.000 14  9 no  0.058  0  0 
       1 11 LEU QD  2 no  100.0  99.2 7.902  7.968 0.066 25 13 no  0.175  0  0 
       1 12 PRO QB 64 no  100.0  99.5 1.181  1.187 0.006  7  1 no  0.081  0  0 
       1 12 PRO QD  5 no  100.0  78.6 2.107  2.681 0.574 21 10 no  0.061  0  0 
       1 12 PRO QG 63 yes 100.0  96.1 0.698  0.726 0.028  7  1 no  0.431  0  0 
       1 13 ARG QB 92 no   70.0  63.9 0.017  0.026 0.009  2  0 no  0.222  0  0 
       1 14 ASP QB 69 no   70.0  19.0 0.002  0.009 0.007  6  0 no  0.114  0  0 
       1 15 ILE QG 12 no  100.0  99.7 7.602  7.624 0.022 15  3 no  0.105  0  0 
       1 18 VAL QG 37 no   35.0   0.4 0.015  3.558 3.543 10  1 yes 2.301 21 27 
       1 19 GLU QB 60 yes 100.0  98.9 0.192  0.195 0.002  7  0 no  0.069  0  0 
       1 20 LEU QB 47 no   70.0  83.9 0.676  0.806 0.130  9  2 no  0.650  0  6 
       1 20 LEU QD  9 no   70.0  57.8 5.875 10.164 4.289 17  7 yes 1.808 12 22 
       1 21 GLN QE 97 no  100.0   0.0 0.000  0.000 0.000  1  0 no  0.000  0  0 
       1 22 ASN QD 62 no  100.0  80.3 2.764  3.441 0.677  7  1 no  0.073  0  0 
       1 23 HIS QB 22 yes 100.0  96.6 1.949  2.018 0.069 12  2 no  0.063  0  0 
       1 24 PHE QB 21 no  100.0  99.9 0.454  0.455 0.001 13  7 no  0.058  0  0 
       1 25 LYS QB 59 no   85.0  80.5 0.039  0.049 0.009  7  0 no  0.304  0  0 
       1 25 LYS QG 88 no   45.0  53.6 0.108  0.201 0.093  3  0 no  0.669  0  2 
       1 26 ASN QB 83 no   65.0  84.6 0.004  0.005 0.001  4  0 no  0.072  0  0 
       1 26 ASN QD 96 no  100.0 100.0 0.000  0.000 0.000  1  0 no  0.040  0  0 
       1 27 SER QB  7 no   85.0  74.4 0.021  0.028 0.007 17  1 no  0.409  0  0 
       1 28 SER QB 87 no   60.0  31.2 0.122  0.389 0.268  3  0 yes 1.193  2  7 
       1 29 PRO QB 14 no  100.0  98.3 0.097  0.098 0.002 15  4 no  0.434  0  0 
       1 29 PRO QD 41 no  100.0  99.9 1.992  1.994 0.003 10  2 no  0.068  0  0 
       1 29 PRO QG 94 yes 100.0 100.0 0.259  0.259 0.000  2  2 no  0.000  0  0 
       1 30 ASP QB 26 no   70.0  71.8 0.034  0.047 0.013 11  0 no  0.248  0  0 
       1 31 GLN QB 84 no  100.0  99.7 0.199  0.200 0.001  4  1 no  0.084  0  0 
       1 31 GLN QE 98 no  100.0 100.0 0.000  0.000 0.000  1  1 no  0.084  0  0 
       1 31 GLN QG 91 no   90.0  87.4 0.024  0.027 0.003  2  0 no  0.352  0  0 
       1 32 ILE QG 82 no   85.0  61.5 0.120  0.195 0.075  4  0 no  0.830  0  2 
       1 33 ARG QB 35 no   60.0  81.1 0.036  0.045 0.008 11  5 no  0.197  0  0 
       1 33 ARG QD 89 no   85.0  75.8 0.004  0.006 0.001  3  1 no  0.197  0  0 
       1 33 ARG QG 76 no   55.0  42.9 0.201  0.468 0.267  5  0 yes 1.104  1  6 
       1 34 LEU QB 44 no  100.0  11.6 0.111  0.957 0.846 10  5 no  0.057  0  0 
       1 34 LEU QD 17 yes 100.0  99.8 5.867  5.877 0.009 14  4 no  0.084  0  0 
       1 35 ARG QB 71 no   95.0  99.7 0.225  0.225 0.001  6  1 no  0.067  0  0 
       1 35 ARG QG 86 no    5.0  13.2 0.000  0.000 0.000  3  0 no  0.051  0  0 
       1 37 ASP QB 55 yes  95.0  78.6 0.561  0.714 0.153  8  2 yes 1.312  1  2 
       1 38 LYS QB 31 no  100.0  96.7 0.096  0.100 0.003 11  2 no  0.068  0  0 
       1 38 LYS QG 74 no   65.0  67.6 0.345  0.510 0.165  6  2 yes 0.761  0 14 
       1 39 GLY QA 43 no   90.0  67.6 0.016  0.024 0.008 10  5 no  0.175  0  0 
       1 40 ILE QG 34 no   15.0  58.3 0.117  0.200 0.083 11  4 no  0.610  0  1 
       1 42 PHE QB 20 no  100.0  99.7 2.279  2.286 0.007 13  4 no  0.162  0  0 
       1 43 LEU QB  8 yes 100.0  96.5 7.138  7.399 0.261 17  4 no  0.059  0  0 
       1 43 LEU QD  1 no  100.0  91.7 4.765  5.198 0.432 35 14 no  0.476  0  0 
       1 45 PHE QB 48 no   85.0  95.5 0.029  0.030 0.001  9  3 no  0.306  0  0 
       1 46 ASP QB 81 no  100.0 100.0 0.000  0.000 0.000  4  0 no  0.048  0  0 
       1 48 ASP QB 52 no  100.0  98.9 0.027  0.027 0.000  8  1 no  0.061  0  0 
       1 49 LYS QB 58 no   80.0  98.6 0.149  0.152 0.002  7  0 no  0.126  0  0 
       1 49 LYS QG 57 no   60.0  53.0 0.125  0.236 0.111  7  0 no  0.594  0  1 
       1 53 GLY QA 80 no   60.0  69.9 0.006  0.008 0.002  4  0 no  0.204  0  0 
       1 54 ILE QG 15 no  100.0  90.5 0.294  0.325 0.031 15  5 no  0.306  0  0 
       1 55 GLN QE 30 no   50.0  19.8 0.366  1.845 1.479 11  2 yes 2.661 15 17 
       1 56 ARG QB 90 no  100.0 100.0 1.721  1.721 0.000  2  0 no  0.000  0  0 
       1 56 ARG QD 79 no   45.0  90.4 0.084  0.093 0.009  4  0 no  0.317  0  0 
       1 56 ARG QG 77 no   55.0  70.0 1.904  2.722 0.817  5  1 no  0.854  0  1 
       1 57 ARG QB 29 no  100.0  99.9 1.801  1.802 0.002 11  2 no  0.068  0  0 
       1 57 ARG QD 51 no   40.0  58.9 0.006  0.011 0.004  8  1 no  0.141  0  0 
       1 58 MET QB 56 yes 100.0  99.7 0.546  0.547 0.002  7  0 no  0.078  0  0 
       1 58 MET QG 42 no  100.0  99.9 3.090  3.093 0.003 10  3 no  0.074  0  0 
       1 59 ASP QB 11 yes 100.0  99.5 2.479  2.492 0.013 15  1 no  0.208  0  0 
       1 60 ILE QG 75 no   75.0  87.2 0.002  0.002 0.000  5  0 no  0.048  0  0 
       1 62 LEU QB 54 yes 100.0  99.5 0.425  0.427 0.002  8  2 no  0.065  0  0 
       1 62 LEU QD 53 no  100.0 100.0 5.219  5.219 0.000  8  2 no  0.000  0  0 
       1 63 LEU QB 33 yes 100.0  99.6 0.889  0.892 0.004 11  4 no  0.064  0  0 
       1 63 LEU QD 67 no  100.0 100.0 2.089  2.089 0.000  7  2 no  0.000  0  0 
       1 64 GLN QB 27 yes 100.0  99.8 0.566  0.567 0.001 11  1 no  0.063  0  0 
       1 64 GLN QE 66 no   70.0  99.9 0.804  0.805 0.001  7  2 no  0.069  0  0 
       1 64 GLN QG 36 yes 100.0  99.9 0.755  0.756 0.001 10  0 no  0.074  0  0 
       1 65 HIS QB 19 yes 100.0  98.8 0.701  0.709 0.008 13  1 no  0.079  0  0 
       1 66 GLY QA 40 no  100.0  99.8 2.930  2.936 0.007 10  2 no  0.087  0  0 
       1 68 LEU QB 39 yes 100.0  99.9 3.435  3.439 0.005 10  2 no  0.083  0  0 
       1 68 LEU QD  6 yes 100.0  98.8 2.058  2.083 0.025 18  2 no  0.120  0  0 
       1 69 LEU QB 61 yes  80.0  99.8 0.224  0.224 0.000  7  1 no  0.063  0  0 
       1 69 LEU QD 10 no   50.0  46.7 2.112  4.523 2.411 16  3 yes 1.534 12 32 
       1 70 LYS QB 70 no   35.0  14.1 0.011  0.078 0.067  6  1 no  0.440  0  0 
       1 71 GLU QB 95 no   95.0  99.6 0.022  0.022 0.000  1  0 no  0.165  0  0 
       1 71 GLU QG 85 no   10.0  49.3 0.003  0.006 0.003  3  0 no  0.238  0  0 
       1 72 LYS QB 28 no  100.0  99.8 0.345  0.346 0.001 11  2 no  0.054  0  0 
       1 72 LYS QG 46 yes  95.0  99.6 0.292  0.293 0.001  9  2 no  0.071  0  0 
       1 73 LYS QB 73 no  100.0  97.6 0.168  0.172 0.004  6  2 no  0.075  0  0 
       1 74 ILE QG 49 no   95.0  86.8 0.016  0.019 0.002  8  0 no  0.322  0  0 
       1 75 ASN QB 45 yes 100.0  99.3 1.033  1.040 0.007  9  0 no  0.081  0  0 
       1 75 ASN QD 78 no  100.0  98.7 0.716  0.726 0.010  5  5 no  0.098  0  0 
       1 76 VAL QG  3 no  100.0  98.6 7.672  7.779 0.107 21  5 no  0.000  0  0 
       1 77 GLU QB 68 no   85.0  95.6 1.097  1.148 0.051  7  3 no  0.086  0  0 
       1 77 GLU QG 24 no   80.0  70.4 0.558  0.792 0.234 12  5 yes 1.418  3  3 
       1 78 LEU QB 72 no   95.0  88.2 0.028  0.032 0.004  6  2 no  0.052  0  0 
       1 78 LEU QD 32 yes  95.0  87.0 2.524  2.901 0.377 11  4 yes 1.728  2  4 
       1 80 VAL QG 38 no   65.0  84.5 5.999  7.101 1.101 10  2 yes 2.092 51 59 
       1 81 GLY QA 93 no   50.0   0.2 0.006  3.489 3.483  2  2 no  0.095  0  0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Thursday, May 23, 2024 5:20:03 PM GMT (wattos1)