NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
594311 2ms4 25104 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2ms4


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        147
    _Stereo_assign_list.Swap_count           2
    _Stereo_assign_list.Swap_percentage      1.4
    _Stereo_assign_list.Deassign_count       11
    _Stereo_assign_list.Deassign_percentage  7.5
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   31.822
    _Stereo_assign_list.Total_e_high_states  393.633
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1   2 VAL QG  63 no  100.0   0.0  0.000  0.003 0.003 12  0 no  0.134  0  0 
       1   3 ASN QD  62 no  100.0   0.0  0.000  0.010 0.010 12  0 no  0.155  0  0 
       1   4 PRO QB  38 no  100.0  99.8  4.749  4.756 0.007 18  0 no  0.131  0  0 
       1   4 PRO QD  75 no   80.0 100.0  0.224  0.224 0.000 10  0 no  0.000  0  0 
       1   4 PRO QG  74 no  100.0 100.0  2.119  2.119 0.000 10  0 no  0.034  0  0 
       1   6 VAL QG   6 no   75.0  12.1  0.375  3.110 2.735 40 16 yes 2.346 12 12 
       1   7 PHE QB 107 no  100.0   0.0  0.000  0.000 0.000  8  8 no  0.000  0  0 
       1   7 PHE QD  14 no  100.0  97.8  5.498  5.623 0.125 30  4 no  0.278  0  0 
       1   7 PHE QE 146 no   30.0 100.0  0.032  0.032 0.000  2  0 no  0.000  0  0 
       1   8 PHE QB  61 no  100.0   0.0  0.000  0.000 0.000 12  0 no  0.006  0  0 
       1   8 PHE QD  37 no  100.0  99.9 39.279 39.319 0.041 18  0 no  0.189  0  0 
       1   8 PHE QE 140 no   85.0  89.4  0.055  0.062 0.007  4  0 no  0.111  0  0 
       1   9 ASP QB  47 no  100.0   0.0  0.000  0.000 0.000 16  0 no  0.006  0  0 
       1  10 ILE QG  29 no  100.0 100.0  0.594  0.594 0.000 22  4 no  0.000  0  0 
       1  12 VAL QG  12 no  100.0   0.0  0.000  0.000 0.000 32 16 no  0.008  0  0 
       1  14 GLY QA 113 no  100.0   0.0  0.000  0.000 0.000  6  0 no  0.000  0  0 
       1  15 GLU QB 100 no  100.0 100.0  0.283  0.283 0.000  8  4 no  0.000  0  0 
       1  15 GLU QG  69 no  100.0   0.0  0.000  0.014 0.014 12  4 no  0.160  0  0 
       1  16 PRO QB 139 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       1  16 PRO QD  42 no  100.0  99.2  1.771  1.785 0.014 18  8 no  0.160  0  0 
       1  17 LEU QB   3 no  100.0  99.2  0.530  0.535 0.005 42  8 no  0.118  0  0 
       1  17 LEU QD  15 no    0.0   0.0  0.000  0.326 0.326 28 12 yes 1.425  4  4 
       1  19 ARG QB  97 no  100.0   0.0  0.000  0.000 0.000  8  0 no  0.000  0  0 
       1  20 VAL QG  17 no  100.0  99.9  0.151  0.151 0.000 26  8 no  0.000  0  0 
       1  21 SER QB  60 no    0.0   0.0  0.000  0.001 0.001 12  0 no  0.057  0  0 
       1  22 PHE QB  18 no   95.0 100.0  1.018  1.018 0.000 26 10 no  0.008  0  0 
       1  22 PHE QD  10 no   70.0  58.4 13.256 22.698 9.442 34 14 yes 3.062 20 62 
       1  22 PHE QE  11 no   70.0  65.6  9.320 14.206 4.886 32 12 yes 2.250 40 62 
       1  23 GLU QB  68 no  100.0 100.0  0.951  0.951 0.000 12  4 no  0.000  0  0 
       1  23 GLU QG 145 no   20.0 100.0  0.270  0.270 0.000  2  0 no  0.000  0  0 
       1  24 LEU QB  32 no  100.0   0.0  0.000  0.000 0.000 20  8 no  0.007  0  0 
       1  24 LEU QD   5 no  100.0   0.0  0.000  0.000 0.000 40 16 no  0.000  0  0 
       1  25 PHE QB  67 no  100.0   0.0  0.000  0.001 0.001 12  4 no  0.096  0  0 
       1  25 PHE QD  41 no   60.0  35.6  0.222  0.622 0.401 18  6 yes 1.587  2  6 
       1  27 ASP QB 138 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       1  28 LYS QB  24 no  100.0 100.0  2.459  2.459 0.000 24 10 no  0.044  0  0 
       1  29 VAL QG   7 no   65.0  95.1  0.027  0.029 0.001 38 12 no  0.069  0  0 
       1  30 PRO QB 137 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       1  30 PRO QD  96 no  100.0   0.0  0.000  0.000 0.000  8  0 no  0.000  0  0 
       1  30 PRO QG 136 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.019  0  0 
       1  31 LYS QB  53 no  100.0 100.0  0.308  0.308 0.000 14  0 no  0.001  0  0 
       1  34 GLU QB  95 no  100.0   0.0  0.000  0.000 0.000  8  0 no  0.000  0  0 
       1  34 GLU QG  94 no  100.0   0.0  0.000  0.000 0.000  8  0 no  0.000  0  0 
       1  35 ASN QB  66 no   40.0  99.9  0.379  0.379 0.000 12  4 no  0.052  0  0 
       1  35 ASN QD 142 no  100.0   0.0  0.000  0.000 0.000  4  4 no  0.000  0  0 
       1  36 PHE QB 106 no  100.0   0.0  0.000  0.000 0.000  8  8 no  0.000  0  0 
       1  37 ARG QB  93 no  100.0   0.0  0.000  0.000 0.000  8  0 no  0.000  0  0 
       1  39 LEU QB  40 no  100.0 100.0  0.894  0.894 0.000 18  6 no  0.000  0  0 
       1  39 LEU QD   8 no  100.0 100.0 14.011 14.017 0.006 38 14 no  0.118  0  0 
       1  40 SER QB  51 no  100.0   0.0  0.000  0.000 0.000 16  8 no  0.000  0  0 
       1  43 GLU QG 135 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       1  44 LYS QB 134 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       1  44 LYS QE  73 no   55.0  94.1  0.059  0.063 0.004 10  0 no  0.128  0  0 
       1  45 GLY QA 147 no  100.0  98.0  2.133  2.177 0.044  2  2 no  0.289  0  0 
       1  46 PHE QB 133 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       1  46 PHE QD  22 no  100.0  99.9 50.284 50.331 0.047 24  4 no  0.289  0  0 
       1  46 PHE QE  78 no  100.0 100.0 22.153 22.159 0.006 10  2 no  0.108  0  0 
       1  48 TYR QD 112 no  100.0   0.0  0.000  0.000 0.000  6  0 no  0.000  0  0 
       1  49 LYS QB 132 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       1  49 LYS QE 131 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.058  0  0 
       1  52 CYS QB  92 no  100.0   0.0  0.000  0.000 0.000  8  0 no  0.000  0  0 
       1  53 PHE QD 111 no  100.0 100.0  1.179  1.179 0.000  6  0 no  0.000  0  0 
       1  53 PHE QE 110 no  100.0 100.0  1.549  1.549 0.000  6  0 no  0.000  0  0 
       1  55 ARG QB  50 no  100.0 100.0  0.353  0.353 0.000 16  8 no  0.000  0  0 
       1  55 ARG QD 105 no  100.0   0.0  0.000  0.000 0.000  8  8 no  0.000  0  0 
       1  58 PRO QD  46 no   80.0  98.9  0.086  0.087 0.001 16  0 no  0.066  0  0 
       1  60 PHE QB  72 no  100.0  99.8  0.289  0.290 0.001 10  0 no  0.083  0  0 
       1  60 PHE QD  45 no  100.0 100.0 10.365 10.367 0.002 16  0 no  0.087  0  0 
       1  60 PHE QE  80 no  100.0  99.9  6.691  6.696 0.005 10  4 no  0.183  0  0 
       1  61 MET QB 130 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       1  63 GLN QB  65 no   90.0  99.3  2.077  2.092 0.015 12  4 no  0.249  0  0 
       1  69 ARG QD 129 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       1  69 ARG QG 128 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       1  75 GLY QA 127 no   60.0 100.0  0.604  0.604 0.000  4  0 no  0.000  0  0 
       1  76 LYS QB 126 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       1  77 SER QB  91 no  100.0   0.0  0.000  0.000 0.000  8  0 no  0.000  0  0 
       1  79 TYR QB 125 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       1  79 TYR QD  98 no  100.0  99.6 10.910 10.956 0.046  8  2 no  0.000  0  0 
       1  79 TYR QE  99 no  100.0 100.0 29.159 29.159 0.000  8  4 no  0.052  0  0 
       1  81 GLU QG 124 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       1  82 LYS QB  25 no  100.0 100.0  2.467  2.468 0.001 22  0 no  0.078  0  0 
       1  82 LYS QD 109 no   70.0  73.3  0.062  0.085 0.023  6  0 no  0.213  0  0 
       1  82 LYS QG  36 no  100.0 100.0  0.001  0.001 0.000 18  0 no  0.100  0  0 
       1  83 PHE QD  28 no   95.0  93.9 34.551 36.786 2.235 22  4 yes 3.491  8 12 
       1  83 PHE QE  90 no   95.0  98.6  6.506  6.596 0.090  8  0 no  0.893  0  2 
       1  84 GLU QB 141 no   95.0  98.9  1.215  1.229 0.013  4  2 no  0.187  0  0 
       1  84 GLU QG  64 no   90.0  69.7  0.736  1.057 0.320 12  2 no  0.086  0  0 
       1  85 ASP QB  59 no   65.0 100.0  0.293  0.293 0.000 12  0 no  0.000  0  0 
       1  86 GLU QB  49 no  100.0   0.0  0.000  0.000 0.000 16  8 no  0.000  0  0 
       1  87 ASN QB 123 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       1  87 ASN QD 122 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       1  88 PHE QD  71 no   75.0  98.3  0.137  0.139 0.002 10  0 no  0.103  0  0 
       1  88 PHE QE 108 no   80.0  85.2  9.339 10.966 1.627  6  0 yes 1.986 12 16 
       1  89 ILE QG  77 no  100.0  99.9  0.232  0.233 0.000 10  2 no  0.044  0  0 
       1  90 LEU QB  70 no  100.0   0.0  0.000  0.000 0.000 12  8 no  0.000  0  0 
       1  90 LEU QD   1 no  100.0  99.8  5.018  5.027 0.010 64 32 no  0.223  0  0 
       1  91 LYS QB  89 no  100.0   0.0  0.000  0.000 0.000  8  0 no  0.000  0  0 
       1  95 PRO QB  52 no  100.0  99.7  2.107  2.114 0.007 14  0 no  0.143  0  0 
       1  95 PRO QD 144 no  100.0   0.0  0.000  0.000 0.000  2  0 no  0.000  0  0 
       1  96 GLY QA  27 no   45.0  99.9  0.249  0.249 0.000 22  4 no  0.036  0  0 
       1  97 ILE QG  44 no   95.0 100.0  0.760  0.760 0.000 16  0 no  0.050  0  0 
       1  98 LEU QB  48 no  100.0   0.0  0.000  0.000 0.000 16  8 no  0.000  0  0 
       1  98 LEU QD   2 no  100.0   0.0  0.000  0.153 0.153 48 28 no  0.877  0  6 
       1 102 ASN QB 121 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       1 102 ASN QD 120 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.027  0  0 
       1 104 GLY QA 104 no  100.0   0.0  0.000  0.000 0.000  8  8 no  0.000  0  0 
       1 105 PRO QB  76 no  100.0  99.4  2.405  2.419 0.014 10  2 no  0.187  0  0 
       1 105 PRO QD 103 no  100.0   0.0  0.000  0.000 0.000  8  8 no  0.000  0  0 
       1 106 ASN QB 119 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       1 110 SER QB  58 no  100.0  99.2  2.117  2.134 0.016 12  0 no  0.220  0  0 
       1 111 GLN QB 118 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       1 112 PHE QD 143 yes  80.0  63.0  0.261  0.414 0.153  2  0 no  0.731  0  6 
       1 113 PHE QD  26 yes  80.0  75.1  8.570 11.407 2.837 22  4 yes 2.051 24 24 
       1 114 ILE QG 102 no  100.0   0.0  0.000  0.000 0.000  8  8 no  0.011  0  0 
       1 115 CYS QB  88 no  100.0   0.0  0.000  0.000 0.000  8  0 no  0.000  0  0 
       1 118 LYS QB  39 no  100.0 100.0  0.705  0.705 0.000 18  2 no  0.000  0  0 
       1 118 LYS QG  57 no  100.0  99.9  2.521  2.523 0.002 12  0 no  0.115  0  0 
       1 120 GLU QB  54 no  100.0 100.0  0.717  0.717 0.000 14  2 no  0.035  0  0 
       1 120 GLU QG  87 no  100.0   0.0  0.000  0.000 0.000  8  0 no  0.000  0  0 
       1 121 TRP QB  86 no  100.0 100.0  0.845  0.845 0.000  8  0 no  0.000  0  0 
       1 122 LEU QB 117 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       1 122 LEU QD  13 no   60.0  89.2  0.231  0.259 0.028 30  4 no  0.183  0  0 
       1 125 LYS QB  85 no  100.0   0.0  0.000  0.001 0.001  8  0 no  0.045  0  0 
       1 127 VAL QG  23 no  100.0   0.0  0.000  0.012 0.012 24  8 no  0.235  0  0 
       1 128 VAL QG   4 no  100.0 100.0  8.160  8.160 0.000 42 10 no  0.000  0  0 
       1 129 PHE QB 116 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       1 130 GLY QA  84 no  100.0   0.0  0.000  0.001 0.001  8  0 no  0.079  0  0 
       1 131 LYS QG  35 no   65.0 100.0  0.029  0.029 0.000 18  0 no  0.000  0  0 
       1 132 VAL QG   9 no   60.0  18.1  0.127  0.705 0.578 34  8 yes 1.816  2 10 
       1 133 LYS QB  34 no   85.0  99.9  0.672  0.672 0.000 18  0 no  0.067  0  0 
       1 133 LYS QG  16 no  100.0  98.7  0.778  0.788 0.010 26  8 no  0.260  0  0 
       1 134 GLU QB  79 no  100.0 100.0  2.845  2.846 0.001 10  4 no  0.110  0  0 
       1 136 MET QG  33 no  100.0 100.0  5.489  5.491 0.002 18  0 no  0.118  0  0 
       1 139 VAL QG  21 no   95.0   0.0  0.000  2.006 2.006 24  4 no  0.000  0  0 
       1 140 GLU QG  56 no   85.0 100.0  0.227  0.227 0.000 12  0 no  0.000  0  0 
       1 142 MET QB  83 no  100.0   0.0  0.000  0.000 0.000  8  0 no  0.000  0  0 
       1 143 GLU QB  30 no  100.0   0.0  0.000  0.000 0.000 20  0 no  0.000  0  0 
       1 143 GLU QG  43 no  100.0   0.0  0.000  0.001 0.001 16  0 no  0.046  0  0 
       1 144 ARG QB  82 no  100.0   0.0  0.000  0.000 0.000  8  0 no  0.000  0  0 
       1 145 PHE QB  55 no  100.0   0.0  0.000  0.000 0.000 12  0 no  0.042  0  0 
       1 145 PHE QD  20 no   95.0  90.2 10.303 11.423 1.120 24  4 yes 1.968  6 14 
       1 145 PHE QE  31 no   95.0  85.9 14.383 16.739 2.357 20  8 yes 2.887  8 12 
       1 148 ARG QG 115 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       1 154 LYS QB 101 no  100.0   0.0  0.000  0.000 0.000  8  8 no  0.008  0  0 
       1 154 LYS QG  81 no  100.0   0.0  0.000  0.000 0.000  8  0 no  0.000  0  0 
       1 161 CYS QB 114 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       1 164 LEU QD  19 no   40.0  94.4  0.088  0.093 0.005 26 12 no  0.153  0  0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Thursday, May 23, 2024 8:59:35 PM GMT (wattos1)