NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
585337 2mpu 18776 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2mpu


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        70
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.056
    _Stereo_assign_list.Total_e_high_states  53.316
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  1 MET QB 70 no  70.0  99.9 0.765 0.765 0.001  1 0 no 0.055 0 0 
       1  3 GLU QB 63 no  80.0  99.9 1.170 1.171 0.001  2 0 no 0.066 0 0 
       1  3 GLU QG 62 no 100.0 100.0 0.000 0.000 0.000  2 0 no 0.051 0 0 
       1  5 ASP QB 69 no 100.0   0.0 0.000 0.000 0.000  1 0 no 0.000 0 0 
       1  9 TYR QB 54 no  20.0 100.0 0.097 0.097 0.000  3 0 no 0.000 0 0 
       1 10 ARG QB 48 no 100.0   0.0 0.000 0.000 0.000  4 0 no 0.000 0 0 
       1 10 ARG QG 47 no 100.0 100.0 1.323 1.323 0.000  4 0 no 0.029 0 0 
       1 11 CYS QB 19 no 100.0  99.9 1.244 1.245 0.001  7 1 no 0.057 0 0 
       1 13 VAL QG  1 no 100.0 100.0 3.088 3.089 0.001 15 6 no 0.053 0 0 
       1 14 GLY QA 12 no  30.0  95.9 0.011 0.012 0.000  8 2 no 0.065 0 0 
       1 16 LEU QB 11 no 100.0  99.3 1.664 1.675 0.011  8 2 no 0.121 0 0 
       1 16 LEU QD  2 no 100.0 100.0 6.225 6.225 0.001 14 1 no 0.040 0 0 
       1 18 TRP QB 53 no 100.0   0.0 0.000 0.000 0.000  3 0 no 0.000 0 0 
       1 19 ASN QB 52 no 100.0   0.0 0.000 0.000 0.000  3 0 no 0.000 0 0 
       1 21 ASP QB 46 no  55.0 100.0 0.010 0.010 0.000  4 0 no 0.000 0 0 
       1 22 ASP QB 17 no 100.0  82.8 0.019 0.023 0.004  7 0 no 0.091 0 0 
       1 23 ARG QB 22 no  45.0  98.8 0.039 0.039 0.000  7 2 no 0.084 0 0 
       1 23 ARG QD 67 no  30.0  99.5 0.095 0.095 0.000  2 2 no 0.084 0 0 
       1 24 GLY QA 45 no 100.0 100.0 1.449 1.449 0.000  4 0 no 0.031 0 0 
       1 25 LEU QB 14 no 100.0  99.9 1.108 1.109 0.001  8 3 no 0.048 0 0 
       1 26 GLU QB 44 no 100.0 100.0 0.333 0.333 0.000  4 0 no 0.000 0 0 
       1 26 GLU QG 61 no 100.0 100.0 0.857 0.857 0.000  2 0 no 0.000 0 0 
       1 29 PHE QB 16 no   5.0 100.0 0.001 0.001 0.000  7 0 no 0.000 0 0 
       1 30 SER QB 60 no 100.0   0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1 31 SER QB 51 no 100.0   0.0 0.000 0.000 0.000  3 0 no 0.000 0 0 
       1 32 PHE QB 29 no  70.0 100.0 0.518 0.518 0.000  6 0 no 0.007 0 0 
       1 33 GLY QA 28 no 100.0 100.0 0.000 0.000 0.000  6 0 no 0.006 0 0 
       1 34 GLU QB 59 no 100.0 100.0 0.000 0.000 0.000  2 0 no 0.011 0 0 
       1 36 LEU QD 24 no  85.0 100.0 2.726 2.726 0.000  7 3 no 0.030 0 0 
       1 37 ASP QB 10 no  55.0  99.7 0.579 0.581 0.002  8 2 no 0.123 0 0 
       1 39 LYS QB 41 no 100.0   0.0 0.000 0.000 0.000  5 2 no 0.000 0 0 
       1 39 LYS QD 66 no 100.0   0.0 0.000 0.000 0.000  2 1 no 0.000 0 0 
       1 39 LYS QG 56 no 100.0 100.0 3.214 3.215 0.000  3 1 no 0.041 0 0 
       1 42 ASN QB 35 no   5.0  82.0 0.000 0.000 0.000  5 0 no 0.039 0 0 
       1 43 ASP QB 21 no 100.0  99.8 1.153 1.155 0.002  7 2 no 0.100 0 0 
       1 45 GLU QB 39 no 100.0  99.9 1.174 1.176 0.001  5 1 no 0.074 0 0 
       1 47 GLY QA 58 no 100.0   0.0 0.000 0.000 0.000  2 0 no 0.000 0 0 
       1 48 ARG QB  6 no  85.0  99.8 0.084 0.085 0.000  9 3 no 0.034 0 0 
       1 48 ARG QD 57 no  95.0  99.8 0.635 0.636 0.001  3 2 no 0.077 0 0 
       1 49 SER QB 27 no  75.0  99.7 0.149 0.149 0.000  6 0 no 0.043 0 0 
       1 50 ARG QB  5 no 100.0 100.0 2.154 2.154 0.001  9 2 no 0.072 0 0 
       1 50 ARG QD 40 no  80.0 100.0 0.047 0.047 0.000  5 2 no 0.000 0 0 
       1 50 ARG QG  7 no  75.0 100.0 0.955 0.955 0.000  9 4 no 0.057 0 0 
       1 51 GLY QA 38 no 100.0 100.0 0.003 0.003 0.000  5 1 no 0.091 0 0 
       1 52 PHE QB 20 no  55.0  99.7 0.330 0.331 0.001  7 2 no 0.065 0 0 
       1 55 VAL QG 65 no   5.0 100.0 0.002 0.002 0.000  2 1 no 0.001 0 0 
       1 56 SER QB 23 no  85.0  99.9 0.682 0.683 0.000  7 3 no 0.040 0 0 
       1 57 PHE QB  9 no  10.0  98.5 0.025 0.026 0.000  8 0 no 0.062 0 0 
       1 58 SER QB 31 no 100.0 100.0 0.000 0.000 0.000  6 2 no 0.011 0 0 
       1 59 ASN QB 37 no 100.0  99.9 0.711 0.712 0.001  5 1 no 0.063 0 0 
       1 60 GLU QB 18 no  40.0  99.8 0.156 0.156 0.000  7 1 no 0.063 0 0 
       1 61 GLN QB  8 no  60.0 100.0 0.003 0.003 0.000  8 0 no 0.000 0 0 
       1 64 GLN QB 15 no 100.0  99.8 0.989 0.991 0.002  7 0 no 0.066 0 0 
       1 65 ASP QB 34 no 100.0 100.0 0.000 0.000 0.000  5 0 no 0.001 0 0 
       1 68 GLU QB 68 no 100.0   0.0 0.000 0.000 0.000  1 0 no 0.000 0 0 
       1 69 GLY QA 43 no 100.0   0.0 0.000 0.000 0.000  4 0 no 0.000 0 0 
       1 70 MET QB 36 no 100.0  98.9 1.425 1.441 0.016  5 1 no 0.153 0 0 
       1 71 ASN QB 33 no  80.0 100.0 0.564 0.564 0.000  5 0 no 0.001 0 0 
       1 72 GLY QA 50 no 100.0   0.0 0.000 0.000 0.000  3 0 no 0.000 0 0 
       1 73 LYS QB 64 no  80.0 100.0 0.246 0.246 0.000  2 1 no 0.000 0 0 
       1 75 LEU QB  4 no  10.0  42.9 0.000 0.001 0.000  9 2 no 0.035 0 0 
       1 75 LEU QD 13 no 100.0 100.0 1.088 1.088 0.000  8 3 no 0.000 0 0 
       1 76 ASP QB 49 no 100.0  99.9 1.023 1.024 0.001  3 0 no 0.046 0 0 
       1 77 GLY QA 42 no 100.0   0.0 0.000 0.000 0.000  4 0 no 0.000 0 0 
       1 78 ARG QB 26 no 100.0 100.0 0.000 0.000 0.000  6 0 no 0.016 0 0 
       1 78 ARG QG 32 no 100.0  99.9 1.378 1.379 0.001  5 0 no 0.076 0 0 
       1 81 VAL QG 25 no 100.0 100.0 1.872 1.872 0.000  6 0 no 0.024 0 0 
       1 82 VAL QG  3 no 100.0 100.0 4.765 4.766 0.001 11 4 no 0.036 0 0 
       1 83 ASN QB 30 no 100.0 100.0 2.720 2.722 0.001  6 1 no 0.089 0 0 
       1 84 GLU QG 55 no 100.0 100.0 2.391 2.393 0.001  3 1 no 0.089 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Thursday, May 23, 2024 9:42:36 PM GMT (wattos1)