NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
569966 2m1h 18474 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2m1h


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        40
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.039
    _Stereo_assign_list.Total_e_high_states  66.293
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1   5 ARG QB 34 no  75.0 100.0 0.184 0.184 0.000  2 0 no 0.016 0 0 
       1   5 ARG QD 26 no  95.0  99.3 0.937 0.944 0.007  4 0 no 0.351 0 0 
       1   7 PHE QB 39 no  95.0 100.0 0.385 0.385 0.000  1 0 no 0.000 0 0 
       1   8 HIS QB 20 no 100.0 100.0 0.365 0.366 0.000  5 0 no 0.041 0 0 
       1  11 ASP QB  9 no 100.0  99.6 2.173 2.182 0.009  7 0 no 0.174 0 0 
       1  12 ARG QB 19 no 100.0 100.0 3.150 3.151 0.001  5 0 no 0.064 0 0 
       1  15 LEU QB  8 no 100.0 100.0 4.228 4.230 0.002  9 0 no 0.116 0 0 
       1  16 LYS QE 33 no  80.0  99.9 0.761 0.762 0.001  2 0 no 0.113 0 0 
       1  20 ASN QB 32 no 100.0  99.7 1.419 1.424 0.004  2 0 no 0.123 0 0 
       1  24 PRO QB 15 no 100.0  98.8 0.148 0.150 0.002  6 0 no 0.082 0 0 
       1  29 SER QB 38 no 100.0  99.8 0.095 0.095 0.000  1 0 no 0.042 0 0 
       1  32 GLY QA 14 no 100.0  99.9 0.833 0.834 0.001  6 0 no 0.088 0 0 
       1  38 GLY QA 25 no  95.0  99.9 0.011 0.011 0.000  4 0 no 0.014 0 0 
       1  42 GLU QB 30 no 100.0   0.0 0.000 0.000 0.000  3 0 no 0.000 0 0 
       1  51 LEU QB 13 no 100.0  99.9 2.546 2.550 0.003  6 0 no 0.078 0 0 
       1  54 PRO QB 12 no 100.0 100.0 1.285 1.285 0.001  6 0 no 0.038 0 0 
       1  54 PRO QG 40 no 100.0 100.0 0.863 0.863 0.000  1 1 no 0.000 0 0 
       1  55 GLY QA 16 no 100.0 100.0 8.542 8.542 0.000  6 4 no 0.013 0 0 
       1  57 GLN QB 29 no 100.0 100.0 1.443 1.443 0.000  3 0 no 0.038 0 0 
       1  58 ASN QB  5 no 100.0 100.0 3.806 3.807 0.001 10 3 no 0.052 0 0 
       1  59 LYS QB 24 no 100.0 100.0 0.662 0.662 0.000  4 0 no 0.034 0 0 
       1  64 ASN QB  1 no 100.0 100.0 3.822 3.822 0.000 11 0 no 0.028 0 0 
       1  68 HIS QB  7 no 100.0 100.0 3.311 3.311 0.000  9 0 no 0.021 0 0 
       1  69 SER QB 23 no 100.0 100.0 0.186 0.186 0.000  4 0 no 0.000 0 0 
       1  74 PHE QB 11 no 100.0  99.9 0.965 0.966 0.001  6 0 no 0.092 0 0 
       1  86 ASN QB  6 no 100.0  99.9 2.799 2.801 0.001  9 0 no 0.075 0 0 
       1  88 ASP QB 10 no 100.0 100.0 3.058 3.059 0.001  6 0 no 0.062 0 0 
       1  89 LEU QB  4 no 100.0 100.0 3.457 3.457 0.000 10 2 no 0.000 0 0 
       1  90 LEU QB  3 no 100.0 100.0 1.235 1.235 0.000 10 2 no 0.012 0 0 
       1  97 GLU QB 18 no 100.0 100.0 1.380 1.380 0.000  5 0 no 0.000 0 0 
       1  98 GLU QB 28 no 100.0 100.0 0.508 0.508 0.000  3 0 no 0.000 0 0 
       1  98 GLU QG 17 no 100.0 100.0 3.225 3.225 0.000  5 0 no 0.013 0 0 
       1 100 LYS QB 37 no 100.0 100.0 0.883 0.883 0.000  1 0 no 0.000 0 0 
       1 100 LYS QE 36 no 100.0  99.9 1.156 1.157 0.001  1 0 no 0.112 0 0 
       1 100 LYS QG 35 no  75.0 100.0 0.285 0.285 0.000  1 0 no 0.009 0 0 
       1 101 GLU QB 21 no 100.0 100.0 2.881 2.882 0.000  5 1 no 0.031 0 0 
       1 102 SER QB  2 no 100.0 100.0 2.947 2.949 0.001 10 1 no 0.051 0 0 
       1 103 ASN QB 27 no  10.0 100.0 0.004 0.004 0.000  3 0 no 0.000 0 0 
       1 107 PHE QB 22 no 100.0 100.0 0.245 0.245 0.000  4 0 no 0.033 0 0 
       1 109 PRO QB 31 no 100.0  99.4 0.069 0.069 0.000  2 0 no 0.063 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Monday, May 20, 2024 2:26:12 PM GMT (wattos1)