NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
556561 2m09 18802 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2m09


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        141
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          10
    _Stereo_assign_list.Total_e_low_states   0.249
    _Stereo_assign_list.Total_e_high_states  246.587
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1   3 MET QB 139 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1   3 MET QG 138 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1   6 LYS QB 137 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1   8 VAL QG 107 no 100.0   0.0  0.000  0.000 0.000  4  4 no 0.036 0 0 
       1   9 ILE QG 136 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.044 0 0 
       1  10 PRO QB  66 no 100.0 100.0  2.306  2.306 0.000  7  2 no 0.036 0 0 
       1  10 PRO QD  43 no 100.0 100.0  2.181  2.182 0.001 11  2 no 0.070 0 0 
       1  12 MET QB  84 no 100.0  99.9  0.678  0.679 0.001  5  2 no 0.043 0 0 
       1  12 MET QG 135 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  13 PRO QB 134 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  13 PRO QD 106 no 100.0   0.0  0.000  0.000 0.000  4  2 no 0.043 0 0 
       1  15 VAL QG 133 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  16 ILE QG  50 no 100.0 100.0  1.115  1.115 0.000  9  0 no 0.009 0 0 
       1  17 PRO QB  80 no 100.0   0.0  0.000  0.001 0.001  6  6 no 0.060 0 0 
       1  17 PRO QD  42 no 100.0 100.0  1.343  1.343 0.000 11  2 no 0.030 0 0 
       1  18 PRO QB 109 no 100.0 100.0  0.975  0.975 0.000  3  2 no 0.000 0 0 
       1  18 PRO QD  79 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.004 0 0 
       1  19 GLY QA  87 no 100.0 100.0  0.227  0.227 0.000  5  4 no 0.000 0 0 
       1  20 LEU QB  15 no 100.0  99.9  1.068  1.069 0.001 20  8 no 0.042 0 0 
       1  20 LEU QD   3 no 100.0 100.0 19.008 19.016 0.008 43 18 no 0.144 0 0 
       1  22 ARG QB  73 no 100.0   0.0  0.000  0.002 0.002  6  0 no 0.071 0 0 
       1  22 ARG QG 104 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.001 0 0 
       1  23 GLU QB  75 no 100.0 100.0  0.879  0.879 0.000  6  1 no 0.000 0 0 
       1  23 GLU QG 103 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  24 GLN QB  27 no 100.0  99.3  0.779  0.784 0.005 15  5 no 0.144 0 0 
       1  25 GLU QB  30 no 100.0 100.0  4.771  4.771 0.001 14  3 no 0.034 0 0 
       1  25 GLU QG  38 no 100.0   0.0  0.000  0.000 0.000 12  4 no 0.000 0 0 
       1  26 ARG QB 105 no 100.0   0.0  0.000  0.000 0.000  4  2 no 0.041 0 0 
       1  26 ARG QD  21 no 100.0  99.7  1.828  1.833 0.005 16  1 no 0.107 0 0 
       1  26 ARG QG  47 no 100.0  99.7  1.020  1.024 0.003 10  3 no 0.087 0 0 
       1  28 TYR QB  37 no 100.0 100.0  1.640  1.640 0.000 12  3 no 0.000 0 0 
       1  29 ILE QG 102 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  30 VAL QG  60 no 100.0   0.0  0.000  0.000 0.000  8  2 no 0.035 0 0 
       1  31 GLN QG  72 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1  32 LEU QB  26 no 100.0 100.0  2.890  2.891 0.001 15  5 no 0.053 0 0 
       1  32 LEU QD  11 no 100.0  99.9  3.942  3.946 0.004 22  6 no 0.080 0 0 
       1  33 GLN QB  34 no 100.0  99.9  0.628  0.629 0.001 13  5 no 0.040 0 0 
       1  33 GLN QG  59 no 100.0   0.0  0.000  0.000 0.000  8  2 no 0.027 0 0 
       1  34 ILE QG  40 no 100.0  99.9  1.872  1.874 0.001 12  5 no 0.057 0 0 
       1  35 GLU QB  82 no 100.0  99.5  0.676  0.680 0.003  5  0 no 0.088 0 0 
       1  35 GLU QG  23 no 100.0  99.8  1.266  1.269 0.003 16  3 no 0.056 0 0 
       1  36 ASP QB  19 no 100.0  98.2  1.042  1.061 0.019 17  6 no 0.184 0 0 
       1  37 LEU QB  24 no 100.0 100.0  1.901  1.901 0.000 15  4 no 0.005 0 0 
       1  37 LEU QD   2 no 100.0  99.9 23.267 23.282 0.015 45 17 no 0.139 0 0 
       1  39 ARG QB  51 no 100.0 100.0  0.945  0.945 0.000  9  1 no 0.022 0 0 
       1  39 ARG QG  44 no 100.0 100.0  1.351  1.351 0.000 10  1 no 0.036 0 0 
       1  40 LYS QB  17 no 100.0  99.5  2.836  2.851 0.015 19  9 no 0.158 0 0 
       1  40 LYS QG  16 no 100.0  99.7  4.503  4.515 0.012 20  9 no 0.128 0 0 
       1  41 LEU QB  64 no 100.0   0.0  0.000  0.000 0.000  8  6 no 0.000 0 0 
       1  41 LEU QD   1 no 100.0  99.9 23.949 23.964 0.015 48 23 no 0.113 0 0 
       1  42 ARG QG 101 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  45 ASP QB  58 no 100.0 100.0  1.784  1.785 0.001  8  2 no 0.052 0 0 
       1  46 LEU QB  48 no 100.0   0.0  0.000  0.000 0.000 10  4 no 0.043 0 0 
       1  46 LEU QD   7 no 100.0  99.8  8.601  8.616 0.016 31 11 no 0.158 0 0 
       1  48 ILE QG 100 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.022 0 0 
       1  49 PRO QB  86 no 100.0  99.9  0.907  0.907 0.001  5  3 no 0.051 0 0 
       1  49 PRO QD  99 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  49 PRO QG 132 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  50 PRO QB 108 no 100.0 100.0  0.492  0.492 0.000  3  0 no 0.000 0 0 
       1  50 PRO QD  85 no 100.0  99.9  1.081  1.081 0.001  5  3 no 0.051 0 0 
       1  51 ASN QB  98 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  51 ASN QD  81 no 100.0  99.9  1.032  1.032 0.001  5  0 no 0.064 0 0 
       1  52 PRO QB 131 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.020 0 0 
       1  52 PRO QD 130 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  53 GLU QB  77 no 100.0   0.0  0.000  0.004 0.004  6  2 no 0.102 0 0 
       1  54 ASP QB  65 no 100.0  99.7  1.236  1.240 0.004  7  2 no 0.102 0 0 
       1  55 ARG QB  97 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.005 0 0 
       1  55 ARG QG  96 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.021 0 0 
       1  56 SER QB 129 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  57 PRO QD 128 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  59 PRO QD 127 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  60 GLU QB 126 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  61 PRO QD 125 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  62 ILE QG  71 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.013 0 0 
       1  63 TYR QB  49 no 100.0  99.9  1.247  1.248 0.001  9  0 no 0.067 0 0 
       1  64 ASN QB 124 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  64 ASN QD 123 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.007 0 0 
       1  66 GLU QB 122 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  67 GLY QA 121 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.024 0 0 
       1  68 LYS QB 120 no 100.0   0.0  0.000  0.002 0.002  2  0 no 0.136 0 0 
       1  68 LYS QG  70 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1  69 ARG QB  95 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  70 LEU QB  54 no 100.0 100.0  0.840  0.840 0.000  9  4 no 0.040 0 0 
       1  70 LEU QD   9 no 100.0  99.9 11.922 11.940 0.018 24  4 no 0.175 0 0 
       1  71 ASN QB 119 no 100.0   0.0  0.000  0.001 0.001  2  0 no 0.074 0 0 
       1  73 ARG QG  94 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  74 GLU QB 118 no   0.0   0.0  0.000  0.007 0.007  2  0 no 0.135 0 0 
       1  79 LYS QE 141 no 100.0   0.0  0.000  0.000 0.000  2  2 no 0.000 0 0 
       1  79 LYS QG  14 no 100.0 100.0  1.522  1.522 0.001 21  7 no 0.041 0 0 
       1  80 LYS QB  29 no 100.0  99.9  2.682  2.684 0.002 14  2 no 0.076 0 0 
       1  80 LYS QD  63 no 100.0   0.0  0.000  0.002 0.002  8  4 no 0.109 0 0 
       1  80 LYS QG  69 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1  81 LEU QB  13 no 100.0 100.0  2.104  2.105 0.001 22 13 no 0.069 0 0 
       1  81 LEU QD   5 no 100.0  99.9 12.456 12.464 0.008 37 12 no 0.108 0 0 
       1  82 GLU QB  39 no 100.0 100.0  0.864  0.864 0.000 12  5 no 0.026 0 0 
       1  82 GLU QG  12 no 100.0  99.8  2.846  2.851 0.005 22 11 no 0.108 0 0 
       1  83 GLU QB  33 no 100.0  99.9  5.534  5.539 0.004 13  4 no 0.110 0 0 
       1  83 GLU QG  62 no 100.0   0.0  0.000  0.000 0.000  8  4 no 0.017 0 0 
       1  84 GLU QB 140 no 100.0   0.0  0.000  0.000 0.000  2  2 no 0.000 0 0 
       1  84 GLU QG  93 no 100.0   0.0  0.000  0.001 0.001  4  0 no 0.065 0 0 
       1  85 ARG QB  35 no 100.0 100.0  0.872  0.872 0.000 13  6 no 0.000 0 0 
       1  85 ARG QD  76 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.013 0 0 
       1  86 HIS QB  36 no 100.0 100.0  1.364  1.364 0.000 12  2 no 0.000 0 0 
       1  87 ASN QB  46 no 100.0 100.0  0.929  0.929 0.000 10  2 no 0.031 0 0 
       1  88 LEU QB  20 no 100.0 100.0  0.675  0.675 0.000 17  7 no 0.000 0 0 
       1  88 LEU QD   6 no 100.0 100.0 25.663 25.669 0.006 32 12 no 0.131 0 0 
       1  89 ILE QG  68 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1  91 GLU QB  57 no 100.0 100.0  0.974  0.974 0.000  8  2 no 0.000 0 0 
       1  91 GLU QG  45 no 100.0   0.0  0.000  0.000 0.000 10  2 no 0.047 0 0 
       1  92 MET QG 117 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  93 VAL QG   4 no 100.0 100.0 21.002 21.007 0.006 37  8 no 0.079 0 0 
       1  95 LEU QB  25 no 100.0 100.0  0.581  0.581 0.000 15  5 no 0.000 0 0 
       1  95 LEU QD   8 no 100.0 100.0 11.009 11.009 0.000 29 14 no 0.026 0 0 
       1  96 ASN QB  18 no 100.0  98.1  0.329  0.335 0.006 17  6 no 0.094 0 0 
       1  97 PRO QB  83 no 100.0 100.0  2.952  2.952 0.000  5  1 no 0.038 0 0 
       1  97 PRO QD  53 no 100.0 100.0  0.244  0.244 0.000  9  3 no 0.005 0 0 
       1  98 ASP QB  92 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  99 PHE QB  61 no 100.0   0.0  0.000  0.001 0.001  8  4 no 0.047 0 0 
       1 100 LYS QG 116 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 101 PRO QB  10 no 100.0 100.0  2.420  2.421 0.001 22  5 no 0.040 0 0 
       1 101 PRO QD  91 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 101 PRO QG  28 no 100.0  99.9  0.980  0.980 0.001 14  2 no 0.044 0 0 
       1 102 PRO QB  67 no 100.0 100.0  0.862  0.862 0.000  6  0 no 0.000 0 0 
       1 102 PRO QD  55 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.000 0 0 
       1 102 PRO QG  22 no 100.0 100.0  2.029  2.029 0.001 16  2 no 0.054 0 0 
       1 105 TYR QB  41 no 100.0   0.0  0.000  0.000 0.000 12  6 no 0.040 0 0 
       1 106 LYS QB  32 no 100.0  97.8  0.695  0.711 0.016 13  4 no 0.179 0 0 
       1 106 LYS QG  56 no 100.0   0.0  0.000  0.000 0.000  8  2 no 0.059 0 0 
       1 107 PRO QB  78 no 100.0 100.0  0.487  0.487 0.000  6  4 no 0.033 0 0 
       1 107 PRO QD  31 no 100.0  99.9  1.823  1.825 0.001 14  6 no 0.108 0 0 
       1 108 PRO QB 115 no 100.0  99.8  0.994  0.996 0.002  2  0 no 0.125 0 0 
       1 108 PRO QD  52 no 100.0 100.0  0.552  0.552 0.000  9  3 no 0.051 0 0 
       1 108 PRO QG  74 no 100.0  99.9  0.868  0.869 0.001  6  1 no 0.065 0 0 
       1 112 VAL QG  90 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 113 SER QB 114 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.009 0 0 
       1 115 LYS QB 113 no 100.0   0.0  0.000  0.008 0.008  2  0 no 0.143 0 0 
       1 115 LYS QG 112 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 116 VAL QG  89 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 117 MET QB 111 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 119 PRO QB 110 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 119 PRO QD  88 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Thursday, May 23, 2024 11:29:09 AM GMT (wattos1)