NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
547528 2lvc 18563 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2lvc


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        86
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.110
    _Stereo_assign_list.Total_e_high_states  110.661
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  4 PRO QD 80 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  5 VAL QG 13 no 100.0 100.0  3.904  3.905 0.001 22  2 no 0.127 0 0 
       1  7 ILE QG 79 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  8 VAL QG  9 no 100.0  99.9  4.632  4.638 0.005 25  6 no 0.138 0 0 
       1  9 ASP QB 19 no 100.0  99.9  0.723  0.724 0.000 15  6 no 0.064 0 0 
       1 10 PRO QB 59 no 100.0   0.0  0.000  0.000 0.000  4  4 no 0.000 0 0 
       1 10 PRO QD 21 no  20.0 100.0  0.041  0.041 0.000 11  0 no 0.000 0 0 
       1 10 PRO QG 56 no 100.0   0.0  0.000  0.000 0.000  4  2 no 0.000 0 0 
       1 11 ARG QD 78 no 100.0   0.0  0.000  0.005 0.005  2  0 no 0.260 0 0 
       1 11 ARG QG 46 no 100.0   0.0  0.000  0.002 0.002  4  0 no 0.173 0 0 
       1 12 GLU QB 77 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 13 HIS QB 76 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 14 VAL QG  5 no 100.0  99.9  8.729  8.734 0.005 29  7 no 0.309 0 0 
       1 16 VAL QG 12 no 100.0 100.0  9.384  9.384 0.000 23  5 no 0.022 0 0 
       1 17 HIS QB 75 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 19 ILE QG 45 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 22 GLU QB 44 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 22 GLU QG 74 no 100.0   0.0  0.000  0.001 0.001  2  0 no 0.107 0 0 
       1 23 CYS QB 43 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 24 VAL QG 14 no 100.0 100.0  5.698  5.698 0.000 22  3 no 0.039 0 0 
       1 25 MET QG 28 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.046 0 0 
       1 26 LEU QB 25 no 100.0   0.0  0.000  0.000 0.000  7  0 no 0.000 0 0 
       1 26 LEU QD  2 no 100.0 100.0  1.616  1.616 0.001 31 17 no 0.070 0 0 
       1 29 GLU QB 86 no 100.0   0.0  0.000  0.000 0.000  2  2 no 0.000 0 0 
       1 29 GLU QG 85 no 100.0   0.0  0.000  0.006 0.006  2  2 no 0.170 0 0 
       1 30 VAL QG  3 no 100.0  99.8  5.068  5.076 0.008 30  4 no 0.170 0 0 
       1 31 ASP QB 84 no 100.0   0.0  0.000  0.005 0.005  2  2 no 0.138 0 0 
       1 32 ARG QB 42 no 100.0   0.0  0.000  0.002 0.002  4  0 no 0.151 0 0 
       1 36 PRO QD 41 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 36 PRO QG 73 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 37 VAL QG 11 no 100.0  99.9  5.154  5.159 0.005 23  4 no 0.165 0 0 
       1 38 ARG QB 40 no 100.0   0.0  0.000  0.001 0.001  4  0 no 0.103 0 0 
       1 38 ARG QG 39 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 39 TRP QB 20 no 100.0  99.8  0.478  0.479 0.001 15  9 no 0.091 0 0 
       1 40 TYR QB 23 no 100.0 100.0  1.667  1.668 0.001  9  2 no 0.098 0 0 
       1 41 LYS QB 83 no 100.0   0.0  0.000  0.000 0.000  2  2 no 0.000 0 0 
       1 41 LYS QE 38 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.057 0 0 
       1 41 LYS QG 72 no 100.0   0.0  0.000  0.002 0.002  2  0 no 0.166 0 0 
       1 44 GLN QB 37 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 44 GLN QG 71 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 45 GLU QG 36 no 100.0   0.0  0.000  0.003 0.003  4  0 no 0.164 0 0 
       1 46 VAL QG 10 no 100.0 100.0  3.669  3.669 0.000 25  8 no 0.000 0 0 
       1 47 GLU QB 70 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 48 GLU QB 35 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 48 GLU QG 24 no 100.0   0.0  0.000  0.001 0.001  8  2 no 0.104 0 0 
       1 49 SER QB 34 no 100.0   0.0  0.000  0.008 0.008  4  0 no 0.400 0 0 
       1 50 ASP QB 69 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 51 PHE QB 55 no 100.0   0.0  0.000  0.000 0.000  4  2 no 0.000 0 0 
       1 52 VAL QG 16 no 100.0 100.0  3.328  3.329 0.000 20  3 no 0.039 0 0 
       1 53 VAL QG 15 no 100.0  99.9  4.239  4.241 0.002 21  4 no 0.110 0 0 
       1 54 LEU QB 26 no  10.0  96.0  0.017  0.018 0.001  7  2 no 0.071 0 0 
       1 54 LEU QD  8 no 100.0 100.0  6.381  6.381 0.001 27 10 no 0.082 0 0 
       1 55 GLU QG 68 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 57 GLU QB 67 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.074 0 0 
       1 59 PRO QB 66 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 59 PRO QD 65 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 60 HIS QB 22 no  70.0 100.0  0.057  0.057 0.000  9  0 no 0.000 0 0 
       1 61 ARG QB 54 no 100.0   0.0  0.000  0.000 0.000  4  2 no 0.000 0 0 
       1 61 ARG QD 53 no 100.0   0.0  0.000  0.000 0.000  4  2 no 0.000 0 0 
       1 61 ARG QG 52 no 100.0   0.0  0.000  0.000 0.000  4  2 no 0.000 0 0 
       1 62 ARG QB 64 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 62 ARG QD 51 no 100.0   0.0  0.000  0.000 0.000  4  2 no 0.068 0 0 
       1 62 ARG QG 63 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.009 0 0 
       1 63 LEU QB 58 no 100.0   0.0  0.000  0.000 0.000  4  4 no 0.000 0 0 
       1 63 LEU QD  1 no 100.0 100.0  9.951  9.953 0.002 33 12 no 0.091 0 0 
       1 64 VAL QG 17 no 100.0 100.0  6.111  6.111 0.000 16  4 no 0.071 0 0 
       1 65 LEU QB 50 no 100.0   0.0  0.000  0.000 0.000  4  2 no 0.000 0 0 
       1 65 LEU QD  4 no 100.0  99.8  9.425  9.442 0.017 30 12 no 0.249 0 0 
       1 66 PRO QB 29 no  75.0  91.2  0.056  0.061 0.005  5  2 no 0.179 0 0 
       1 66 PRO QD 18 no 100.0   0.0  0.000  0.001 0.001 16  8 no 0.109 0 0 
       1 66 PRO QG 49 no 100.0   0.0  0.000  0.009 0.009  4  2 no 0.249 0 0 
       1 69 GLN QB 33 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 70 PRO QG 32 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 71 SER QB 62 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 73 GLY QA 48 no 100.0   0.0  0.000  0.000 0.000  4  2 no 0.031 0 0 
       1 76 PHE QB 82 no 100.0   0.0  0.000  0.000 0.000  2  2 no 0.000 0 0 
       1 77 GLN QB 27 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.000 0 0 
       1 78 CYS QB 61 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 79 VAL QG  7 no 100.0 100.0 10.607 10.612 0.005 27  0 no 0.147 0 0 
       1 81 GLY QA 81 no 100.0   0.0  0.000  0.000 0.000  2  2 no 0.000 0 0 
       1 83 GLU QB 31 no 100.0   0.0  0.000  0.001 0.001  4  0 no 0.124 0 0 
       1 83 GLU QG 30 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 86 TYR QB 60 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.014 0 0 
       1 87 PHE QB 57 no 100.0   0.0  0.000  0.000 0.000  4  4 no 0.000 0 0 
       1 89 VAL QG  6 no 100.0 100.0  9.617  9.618 0.001 29  8 no 0.107 0 0 
       1 91 ILE QG 47 no 100.0   0.0  0.000  0.001 0.001  4  2 no 0.107 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Saturday, May 11, 2024 8:55:18 PM GMT (wattos1)