NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
544201 2lva 18560 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2lva


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        75
    _Stereo_assign_list.Swap_count           2
    _Stereo_assign_list.Swap_percentage      2.7
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   3.514
    _Stereo_assign_list.Total_e_high_states  67.203
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  19 GLN QE 44 no  100.0   0.0  0.000  0.009 0.009  6  0 no 0.331 0 0 
       1  21 LEU QB 15 no  100.0 100.0  0.325  0.325 0.000 16  6 no 0.000 0 0 
       1  21 LEU QD 25 no  100.0   0.0  0.000  0.024 0.024 12  4 no 0.264 0 0 
       1  22 LEU QB 38 no  100.0   0.0  0.000  0.000 0.000  8  4 no 0.000 0 0 
       1  22 LEU QD  4 no  100.0   0.0  0.000  0.006 0.006 26 10 no 0.148 0 0 
       1  23 ASN QB 61 no  100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  23 ASN QD 43 no  100.0   0.0  0.000  0.003 0.003  6  0 no 0.152 0 0 
       1  24 GLN QB 42 no  100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1  24 GLN QE 37 no  100.0   0.0  0.000  0.024 0.024  8  2 no 0.295 0 0 
       1  24 GLN QG 60 no  100.0   0.0  0.000  0.000 0.000  4  0 no 0.013 0 0 
       1  25 LEU QD 13 no    0.0   0.0  0.000  0.019 0.019 16  2 no 0.228 0 0 
       1  26 ARG QB 10 no  100.0  99.8  1.541  1.544 0.003 18  8 no 0.170 0 0 
       1  26 ARG QD 16 no  100.0   0.0  0.000  0.000 0.000 16 10 no 0.020 0 0 
       1  26 ARG QG 12 no  100.0 100.0  0.117  0.117 0.000 17  5 no 0.000 0 0 
       1  27 GLU QB 34 no   70.0  98.6  0.059  0.060 0.001  9  1 no 0.093 0 0 
       1  28 ILE QG  7 no  100.0 100.0  0.398  0.398 0.000 21  0 no 0.000 0 0 
       1  30 GLY QA 74 no  100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  31 ILE QG 18 no  100.0  99.1  0.026  0.027 0.000 14  1 no 0.060 0 0 
       1  32 GLN QB 59 no  100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  32 GLN QE 39 no  100.0   0.0  0.000  0.000 0.000  8  6 no 0.000 0 0 
       1  32 GLN QG 29 no  100.0 100.0  1.862  1.862 0.000 10  0 no 0.000 0 0 
       1  33 ASP QB 24 no  100.0   0.0  0.000  0.000 0.000 12  4 no 0.061 0 0 
       1  34 PRO QB 32 no   20.0  95.9  0.007  0.007 0.000 10  3 no 0.057 0 0 
       1  34 PRO QD 23 no  100.0 100.0  0.199  0.199 0.000 12  4 no 0.000 0 0 
       1  34 PRO QG 45 no  100.0  99.4  0.395  0.398 0.002  6  1 no 0.215 0 0 
       1  36 PHE QD 31 yes 100.0  99.9 14.535 14.547 0.012 10  2 no 0.160 0 0 
       1  36 PHE QE 63 yes 100.0 100.0  3.245  3.245 0.000  3  2 no 0.000 0 0 
       1  37 LEU QB 20 no  100.0   0.0  0.000  0.000 0.000 14  8 no 0.000 0 0 
       1  37 LEU QD  2 no  100.0  87.3  7.629  8.736 1.107 52 17 no 0.178 0 0 
       1  41 LEU QB 17 no  100.0 100.0  0.826  0.826 0.000 15  3 no 0.053 0 0 
       1  41 LEU QD  1 no  100.0  99.4  9.783  9.842 0.059 52 11 no 0.310 0 0 
       1  42 LYS QB 21 no  100.0   0.0  0.000  0.000 0.000 12  0 no 0.000 0 0 
       1  42 LYS QG 58 no  100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  45 ASN QB 73 no  100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  45 ASN QD 72 no  100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  46 GLY QA 75 no  100.0   0.0  0.000  0.000 0.000  2  2 no 0.000 0 0 
       1  47 ASP QB 11 no  100.0 100.0  0.461  0.461 0.000 17  0 no 0.000 0 0 
       1  48 ILE QG  6 no  100.0  98.8  1.881  1.904 0.023 24  6 no 0.226 0 0 
       1  50 GLN QE 33 no  100.0   0.0  0.000  0.000 0.000 10  4 no 0.078 0 0 
       1  50 GLN QG 28 no  100.0  99.9  1.122  1.124 0.001 10  0 no 0.083 0 0 
       1  52 VAL QG  9 no    0.0   0.0  0.000  0.011 0.011 18  2 no 0.223 0 0 
       1  54 LEU QB 19 no  100.0 100.0  2.804  2.804 0.000 14  4 no 0.087 0 0 
       1  54 LEU QD  5 no  100.0  99.8  5.155  5.165 0.010 25  8 no 0.179 0 0 
       1  55 LEU QB  8 no  100.0 100.0  1.396  1.396 0.000 21  3 no 0.000 0 0 
       1  55 LEU QD  3 no  100.0  73.8  6.031  8.175 2.144 35  7 no 0.152 0 0 
       1  58 GLU QB 57 no  100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  58 GLU QG 56 no  100.0   0.0  0.000  0.002 0.002  4  0 no 0.147 0 0 
       1  61 LYS QB 55 no    0.0   0.0  0.000  0.003 0.003  4  0 no 0.142 0 0 
       1  65 GLN QB 71 no  100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  66 ASP QB 54 no  100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  71 GLU QB 62 no  100.0   0.0  0.000  0.000 0.000  4  4 no 0.000 0 0 
       1  72 PRO QB 70 no  100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  72 PRO QD 22 no   80.0  96.5  0.210  0.217 0.008 12  4 no 0.210 0 0 
       1  74 GLU QB 69 no  100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  76 GLU QB 68 no  100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  85 LEU QB 53 no  100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  90 ASP QB 52 no  100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  91 LEU QD 36 no  100.0   0.0  0.000  0.000 0.000  8  0 no 0.021 0 0 
       1  93 HIS QB 67 no  100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  94 ASP QB 66 no  100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  95 ASN QB 65 no  100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  97 ASP QB 51 no  100.0   0.0  0.000  0.000 0.000  4  0 no 0.024 0 0 
       1  98 ASP QB 41 no  100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1  99 LEU QB 30 no  100.0  99.9  0.452  0.453 0.001 10  2 no 0.067 0 0 
       1  99 LEU QD 14 no    0.0   0.0  0.000  0.000 0.000 16  6 no 0.031 0 0 
       1 100 GLN QE 46 no  100.0   0.0  0.000  0.000 0.000  6  4 no 0.030 0 0 
       1 100 GLN QG 50 no    0.0   0.0  0.000  0.026 0.026  4  0 no 0.310 0 0 
       1 103 ILE QG 40 no  100.0   0.0  0.000  0.002 0.002  6  0 no 0.107 0 0 
       1 105 LEU QB 35 no  100.0  99.9  0.484  0.484 0.001  8  0 no 0.104 0 0 
       1 107 LEU QB 27 no  100.0  99.8  2.747  2.753 0.006 10  0 no 0.184 0 0 
       1 108 LEU QB 64 no  100.0   0.0  0.000  0.000 0.000  2  0 no 0.040 0 0 
       1 111 PRO QD 49 no  100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 113 ILE QG 48 no  100.0   0.0  0.000  0.000 0.000  4  0 no 0.035 0 0 
       1 119 ASP QB 26 no  100.0   0.0  0.000  0.005 0.005 10  0 no 0.224 0 0 
       1 120 LEU QB 47 no  100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Wednesday, May 29, 2024 8:34:08 AM GMT (wattos1)