NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
503324 2l9n 17479 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2l9n


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        69
    _Stereo_assign_list.Swap_count           6
    _Stereo_assign_list.Swap_percentage      8.7
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.027
    _Stereo_assign_list.Total_e_high_states  13.331
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  14 LEU QB 42 no  100.0   0.0 0.000 0.000 0.000  9  2 no 0.000 0 0 
       1  14 LEU QD 17 no   90.0 100.0 0.506 0.506 0.000 16  2 no 0.000 0 0 
       1  17 VAL QG 18 no  100.0 100.0 2.786 2.786 0.000 15  1 no 0.000 0 0 
       1  19 VAL QG 11 no   60.0  99.7 0.026 0.027 0.000 20  3 no 0.040 0 0 
       1  20 VAL QG 10 no  100.0  99.9 1.953 1.954 0.001 22  4 no 0.105 0 0 
       1  23 LYS QB 21 no  100.0   0.0 0.000 0.000 0.000 14  0 no 0.000 0 0 
       1  27 LYS QB 34 no  100.0   0.0 0.000 0.000 0.000 11  0 no 0.000 0 0 
       1  29 PHE QB 12 no  100.0   0.0 0.000 0.000 0.000 19  2 no 0.000 0 0 
       1  33 CYS QB 19 no  100.0   0.0 0.000 0.000 0.000 15  7 no 0.000 0 0 
       1  34 TYR QB 48 no  100.0   0.0 0.000 0.000 0.000  8  0 no 0.000 0 0 
       1  38 VAL QG  6 no  100.0  99.9 0.396 0.397 0.000 26  8 no 0.092 0 0 
       1  39 VAL QG 37 no   55.0 100.0 0.172 0.172 0.000 10  0 no 0.000 0 0 
       1  41 TRP QB 24 no  100.0   0.0 0.000 0.001 0.001 14  8 no 0.080 0 0 
       1  45 VAL QG 52 no    5.0 100.0 0.006 0.006 0.000  6  0 no 0.000 0 0 
       1  47 LYS QB 38 no  100.0   0.0 0.000 0.001 0.001 10  4 no 0.080 0 0 
       1  48 ASP QB 22 no  100.0   0.0 0.000 0.000 0.000 14  1 no 0.000 0 0 
       1  49 LEU QD 13 no   95.0  99.6 0.821 0.825 0.004 19  3 no 0.147 0 0 
       1  52 VAL QG  7 no  100.0 100.0 0.000 0.000 0.000 25 11 no 0.053 0 0 
       1  53 LEU QD  1 no   95.0  99.6 0.170 0.171 0.001 47 12 no 0.108 0 0 
       1  54 GLN QB 59 no  100.0   0.0 0.000 0.000 0.000  5  1 no 0.000 0 0 
       1  56 HIS QB 29 no  100.0   0.0 0.000 0.000 0.000 13  1 no 0.000 0 0 
       1  57 SER QB 14 yes 100.0 100.0 2.157 2.157 0.000 19  6 no 0.012 0 0 
       1  58 VAL QG  3 no  100.0 100.0 1.206 1.206 0.000 32  4 no 0.000 0 0 
       1  59 PHE QB 15 no  100.0   0.0 0.000 0.000 0.000 18  2 no 0.000 0 0 
       1  60 VAL QG  8 no   15.0 100.0 0.001 0.001 0.000 23  0 no 0.000 0 0 
       1  62 VAL QG  2 no  100.0  99.9 0.134 0.134 0.000 37  2 no 0.040 0 0 
       1  64 LYS QB 28 no  100.0 100.0 0.000 0.000 0.000 13  0 no 0.014 0 0 
       1  67 VAL QG  5 no  100.0   0.0 0.000 0.017 0.017 26  6 no 0.000 0 0 
       1  69 LYS QB 27 yes 100.0 100.0 0.201 0.201 0.000 13  0 no 0.005 0 0 
       1  73 LEU QB 36 no   35.0 100.0 0.000 0.000 0.000 10  0 no 0.000 0 0 
       1  77 PHE QB  9 no  100.0 100.0 0.005 0.005 0.000 22  0 no 0.155 0 0 
       1  80 ASP QB 35 no  100.0 100.0 0.017 0.017 0.000 10  0 no 0.359 0 0 
       1  86 CYS QB 23 no  100.0   0.0 0.000 0.000 0.000 14  4 no 0.000 0 0 
       1  90 LEU QD  4 no   95.0 100.0 0.303 0.303 0.000 28 13 no 0.000 0 0 
       1  96 GLN QB 16 no  100.0   0.0 0.000 0.000 0.000 16  2 no 0.000 0 0 
       1  97 VAL QG 53 no    5.0 100.0 0.000 0.000 0.000  6  1 no 0.000 0 0 
       1 117 VAL QG 47 no   10.0 100.0 0.019 0.019 0.000  8  0 no 0.000 0 0 
       1 122 VAL QG 31 no  100.0 100.0 0.539 0.539 0.000 12  0 no 0.059 0 0 
       1 132 VAL QG 50 no  100.0   0.0 0.000 0.000 0.000  7  0 no 0.000 0 0 
       1 134 LEU QD 46 no  100.0   0.0 0.000 0.000 0.000  8  0 no 0.000 0 0 
       1 139 MET QG 58 yes  95.0 100.0 0.908 0.908 0.000  5  0 no 0.012 0 0 
       1 141 ASP QB 30 no   10.0 100.0 0.000 0.000 0.000 12  0 no 0.000 0 0 
       1 146 VAL QG 33 no   25.0 100.0 0.021 0.021 0.000 11  0 no 0.000 0 0 
       1 147 LYS QB 69 no  100.0   0.0 0.000 0.000 0.000  1  0 no 0.000 0 0 
       1 149 ASN QD 65 no  100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 157 LEU QB 43 no  100.0   0.0 0.000 0.000 0.000  9  3 no 0.000 0 0 
       1 157 LEU QD 49 no  100.0   0.0 0.000 0.000 0.000  8  3 no 0.000 0 0 
       1 158 GLU QG 57 no  100.0   0.0 0.000 0.000 0.000  5  0 no 0.000 0 0 
       1 159 VAL QG 45 no  100.0 100.0 0.000 0.000 0.000  8  0 no 0.000 0 0 
       1 162 GLN QG 26 no  100.0 100.0 0.035 0.035 0.000 13  0 no 0.537 0 1 
       1 163 LEU QD 20 no   75.0 100.0 0.343 0.343 0.000 14  0 no 0.032 0 0 
       1 176 LEU QD 64 no  100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 180 LEU QB 62 yes 100.0 100.0 0.147 0.147 0.000  3  0 no 0.000 0 0 
       1 182 VAL QG 44 no  100.0   0.0 0.000 0.000 0.000  8  0 no 0.000 0 0 
       1 188 LEU QB 32 no  100.0 100.0 0.000 0.000 0.000 11  0 no 0.008 0 0 
       1 192 LEU QD 25 no   60.0  93.4 0.017 0.018 0.001 13  0 no 0.139 0 0 
       1 211 VAL QG 68 no  100.0   0.0 0.000 0.000 0.000  1  0 no 0.000 0 0 
       1 213 LEU QD 67 no  100.0   0.0 0.000 0.000 0.000  1  0 no 0.000 0 0 
       1 220 ARG QG 56 no  100.0   0.0 0.000 0.000 0.000  5  0 no 0.000 0 0 
       1 225 LEU QD 66 no  100.0   0.0 0.000 0.000 0.000  1  0 no 0.000 0 0 
       1 229 GLU QB 55 no  100.0   0.0 0.000 0.000 0.000  5  0 no 0.000 0 0 
       1 233 LYS QB 51 no  100.0 100.0 0.079 0.079 0.000  6  0 no 0.752 0 3 
       1 238 VAL QG 41 no   70.0 100.0 0.044 0.044 0.000  9  0 no 0.000 0 0 
       1 241 LEU QB 40 yes  95.0 100.0 0.150 0.150 0.000  9  0 no 0.003 0 0 
       1 244 VAL QG 61 no  100.0   0.0 0.000 0.000 0.000  3  0 no 0.000 0 0 
       1 245 GLU QG 60 no  100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 248 ASP QB 54 yes  95.0 100.0 0.140 0.140 0.000  5  0 no 0.033 0 0 
       1 251 PHE QB 39 no  100.0 100.0 0.001 0.001 0.000  9  0 no 0.167 0 0 
       1 252 GLU QG 63 no  100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Thursday, May 23, 2024 10:28:19 AM GMT (wattos1)