NMR Restraints Grid

Result table
(Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype

499977 2l6i 17309 cing 4-filtered-FRED Wattos check stereo assignment distance

data_2l6i


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        18
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          27
    _Stereo_assign_list.Total_e_low_states   0.160
    _Stereo_assign_list.Total_e_high_states  29.035
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  1 G Q2  18 no 100.0 100.0 1.697 1.697 0.000 1 0 no 0.000 0 0 
       1  1 G Q5'  4 no 100.0  66.2 0.073 0.110 0.037 4 1 no 0.201 0 0 
       1  2 A Q6  17 no 100.0 100.0 1.957 1.957 0.000 1 0 no 0.000 0 0 
       1  4 C Q4  16 no 100.0 100.0 1.884 1.884 0.000 1 0 no 0.000 0 0 
       1  5 U Q5'  3 no 100.0   0.0 0.000 0.000 0.000 4 0 no 0.000 0 0 
       1  6 C Q4  15 no 100.0 100.0 1.842 1.842 0.000 1 0 no 0.000 0 0 
       1  7 U Q5'  8 no 100.0  98.7 0.813 0.824 0.011 2 0 no 0.179 0 0 
       1  8 U Q5'  5 no  59.3  98.3 0.164 0.167 0.003 3 0 no 0.172 0 0 
       1  9 G Q2  14 no 100.0 100.0 1.672 1.672 0.000 1 0 no 0.000 0 0 
       1  9 G Q5'  2 no 100.0  89.7 0.382 0.426 0.044 4 0 no 0.225 0 0 
       1 10 U Q5'  1 no 100.0  99.1 7.025 7.088 0.063 6 0 no 0.268 0 0 
       1 11 A Q5'  6 no 100.0 100.0 4.091 4.091 0.000 3 1 no 0.050 0 0 
       1 11 A Q6  13 no 100.0 100.0 1.864 1.864 0.000 1 0 no 0.000 0 0 
       1 12 G Q2  12 no 100.0 100.0 1.711 1.711 0.000 1 0 no 0.000 0 0 
       1 13 A Q6  11 no 100.0 100.0 1.860 1.860 0.000 1 0 no 0.000 0 0 
       1 14 U Q5'  7 no 100.0   0.0 0.000 0.001 0.001 2 0 no 0.066 0 0 
       1 15 C Q4  10 no 100.0 100.0 1.839 1.839 0.000 1 0 no 0.000 0 0 
       1 15 C Q5'  9 no 100.0   0.0 0.000 0.000 0.000 1 0 no 0.000 0 0 
    stop_

save_

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Contact the webmaster for help, if required. Monday, April 29, 2024 2:29:47 AM GMT (wattos1)

image	mrblock_id	pdb_id	bmrb_id	cing	stage	program	type	subtype	subsubtype
	499977	2l6i	17309	cing	4-filtered-FRED	Wattos	check	stereo assignment	distance