NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
476316 2rop 11041 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2rop


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        138
    _Stereo_assign_list.Swap_count           4
    _Stereo_assign_list.Swap_percentage      2.9
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.646
    _Stereo_assign_list.Total_e_high_states  15.630
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  20 VAL QG   6 no   25.0 100.0 0.023 0.023 0.000 18  0 no 0.000 0 0 
       1  22 LEU QB  22 no  100.0   0.0 0.000 0.000 0.000 14  5 no 0.000 0 0 
       1  22 LEU QD  17 no   40.0  73.1 0.008 0.010 0.003 15  5 no 0.237 0 0 
       1  23 GLN QB  71 no  100.0   0.0 0.000 0.000 0.000  8  3 no 0.000 0 0 
       1  23 GLN QE  56 yes 100.0 100.0 0.132 0.132 0.000  9  4 no 0.000 0 0 
       1  23 GLN QG 101 no   20.0 100.0 0.011 0.011 0.000  6  2 no 0.000 0 0 
       1  24 LEU QB  94 no  100.0   0.0 0.000 0.000 0.000  6  0 no 0.000 0 0 
       1  24 LEU QD  48 no  100.0   0.0 0.000 0.000 0.000  9  0 no 0.000 0 0 
       1  25 ARG QB  98 no    5.0 100.0 0.000 0.000 0.000  6  1 no 0.000 0 0 
       1  25 ARG QD  63 no   25.0 100.0 0.023 0.023 0.000  8  1 no 0.000 0 0 
       1  26 ILE QG  47 no   70.0 100.0 0.049 0.049 0.000  9  0 no 0.000 0 0 
       1  27 ASP QB   8 no   35.0 100.0 0.058 0.058 0.000 18  9 no 0.018 0 0 
       1  28 GLY QA  86 no  100.0   0.0 0.000 0.000 0.000  7  2 no 0.000 0 0 
       1  29 MET QB 120 no    5.0 100.0 0.027 0.027 0.000  4  0 no 0.000 0 0 
       1  32 LYS QD 133 no   40.0 100.0 0.138 0.138 0.000  2  0 no 0.000 0 0 
       1  34 CYS QB  93 no   25.0 100.0 0.027 0.027 0.000  6  0 no 0.000 0 0 
       1  35 VAL QG  24 no   10.0 100.0 0.000 0.000 0.000 13  1 no 0.000 0 0 
       1  36 LEU QB  79 no  100.0   0.0 0.000 0.000 0.000  7  0 no 0.000 0 0 
       1  37 ASN QB  88 no  100.0   0.0 0.000 0.000 0.000  7  3 no 0.000 0 0 
       1  37 ASN QD  16 no  100.0 100.0 0.002 0.002 0.000 15  4 no 0.167 0 0 
       1  38 ILE QG  42 no  100.0   0.0 0.000 0.000 0.000 10  3 no 0.004 0 0 
       1  39 GLU QB  97 no   25.0 100.0 0.007 0.007 0.000  6  1 no 0.000 0 0 
       1  40 GLU QB  68 no  100.0   0.0 0.000 0.000 0.000  8  2 no 0.000 0 0 
       1  40 GLU QG 125 no   10.0 100.0 0.017 0.017 0.000  4  1 no 0.000 0 0 
       1  41 ASN QB  34 no  100.0   0.0 0.000 0.000 0.000 11  3 no 0.000 0 0 
       1  41 ASN QD  18 yes 100.0 100.0 0.105 0.105 0.000 15  8 no 0.000 0 0 
       1  42 ILE QG  67 no   10.0 100.0 0.077 0.077 0.000  8  2 no 0.000 0 0 
       1  43 GLY QA  41 no  100.0   0.0 0.000 0.000 0.000 10  2 no 0.000 0 0 
       1  44 GLN QB 124 no  100.0   0.0 0.000 0.000 0.000  4  1 no 0.000 0 0 
       1  44 GLN QE 114 no  100.0 100.0 0.003 0.003 0.000  5  3 no 0.131 0 0 
       1  44 GLN QG  85 no   80.0  26.9 0.001 0.003 0.002  7  2 no 0.131 0 0 
       1  45 LEU QB  61 no    5.0 100.0 0.002 0.002 0.000  8  0 no 0.000 0 0 
       1  45 LEU QD  33 no   95.0  65.6 0.001 0.001 0.000 11  2 no 0.104 0 0 
       1  46 LEU QD  21 no   30.0 100.0 0.020 0.020 0.000 14  5 no 0.000 0 0 
       1  47 GLY QA  23 no   20.0 100.0 0.005 0.005 0.000 14  6 no 0.000 0 0 
       1  49 GLN QB  89 no  100.0   0.0 0.000 0.000 0.000  7  4 no 0.000 0 0 
       1  49 GLN QE 115 no  100.0   0.0 0.000 0.000 0.000  5  4 no 0.000 0 0 
       1  49 GLN QG 109 no  100.0   0.0 0.000 0.000 0.000  5  0 no 0.000 0 0 
       1  51 ILE QG  92 no  100.0   0.0 0.000 0.000 0.000  6  0 no 0.000 0 0 
       1  52 GLN QB 112 no  100.0   0.0 0.000 0.000 0.000  5  2 no 0.000 0 0 
       1  52 GLN QE 138 no  100.0   0.0 0.000 0.000 0.000  1  1 no 0.000 0 0 
       1  52 GLN QG  66 no   85.0 100.0 1.268 1.268 0.000  8  2 no 0.000 0 0 
       1  54 SER QB  87 no   15.0  98.3 0.005 0.005 0.000  7  3 no 0.041 0 0 
       1  55 LEU QB 119 no   20.0 100.0 0.009 0.009 0.000  4  0 no 0.000 0 0 
       1  56 GLU QB 118 no  100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1  56 GLU QG 100 no   40.0 100.0 0.254 0.254 0.000  6  2 no 0.000 0 0 
       1  57 ASN QB  40 no   40.0 100.0 0.242 0.242 0.000 10  2 no 0.000 0 0 
       1  58 LYS QB 131 no  100.0   0.0 0.000 0.000 0.000  3  0 no 0.000 0 0 
       1  61 GLN QE  28 no  100.0 100.0 0.004 0.004 0.000 12  1 no 0.242 0 0 
       1  61 GLN QG  53 no  100.0 100.0 0.654 0.654 0.000  9  3 no 0.000 0 0 
       1  62 VAL QG   5 no   95.0 100.0 0.608 0.608 0.000 20  6 no 0.000 0 0 
       1  63 LYS QB  60 no  100.0   0.0 0.000 0.000 0.000  8  0 no 0.000 0 0 
       1  64 TYR QB  70 no   45.0 100.0 0.050 0.050 0.000  8  3 no 0.000 0 0 
       1  67 SER QB 117 no  100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1  68 CYS QB  14 no    5.0 100.0 0.003 0.003 0.000 16  7 no 0.000 0 0 
       1  71 PRO QD 130 no   55.0 100.0 0.005 0.005 0.000  3  0 no 0.000 0 0 
       1  72 VAL QG  78 no  100.0   0.0 0.000 0.000 0.000  7  0 no 0.000 0 0 
       1  74 LEU QB  73 no   20.0 100.0 0.003 0.003 0.000  8  5 no 0.000 0 0 
       1  74 LEU QD   4 no    5.0 100.0 0.000 0.000 0.000 27  8 no 0.000 0 0 
       1  75 GLN QB  81 no   60.0 100.0 0.025 0.025 0.000  7  1 no 0.000 0 0 
       1  75 GLN QE  72 no  100.0   0.0 0.000 0.001 0.001  8  4 no 0.130 0 0 
       1  76 ARG QB 129 no  100.0 100.0 0.654 0.654 0.000  3  0 no 0.000 0 0 
       1  78 ILE QG  39 no  100.0 100.0 0.531 0.531 0.000 10  1 no 0.000 0 0 
       1  79 GLU QB 108 no   90.0 100.0 0.015 0.015 0.000  5  0 no 0.000 0 0 
       1  79 GLU QG  38 no  100.0   0.0 0.000 0.000 0.000 10  1 no 0.000 0 0 
       1  81 LEU QB 127 no   10.0 100.0 0.003 0.003 0.000  4  2 no 0.000 0 0 
       1  81 LEU QD   2 no  100.0 100.0 0.202 0.202 0.000 29 12 no 0.000 0 0 
       1  82 PRO QB 123 no  100.0   0.0 0.000 0.000 0.000  4  1 no 0.000 0 0 
       1  82 PRO QD 137 no  100.0   0.0 0.000 0.000 0.000  1  1 no 0.000 0 0 
       1  84 GLY QA 134 no  100.0   0.0 0.000 0.000 0.000  2  1 no 0.000 0 0 
       1  85 ASN QB  91 no  100.0   0.0 0.000 0.000 0.000  6  0 no 0.000 0 0 
       1  86 PHE QB 122 no  100.0   0.0 0.000 0.000 0.000  4  1 no 0.000 0 0 
       1  87 LYS QB  55 no   10.0 100.0 0.006 0.006 0.000  9  4 no 0.000 0 0 
       1  87 LYS QE 113 no   40.0 100.0 0.009 0.009 0.000  5  3 no 0.000 0 0 
       1  87 LYS QG  32 no   20.0 100.0 0.023 0.023 0.000 12  6 no 0.000 0 0 
       1  88 VAL QG   9 no  100.0   0.0 0.000 0.001 0.001 17  4 no 0.130 0 0 
       1  89 SER QB 107 no  100.0   0.0 0.000 0.000 0.000  5  0 no 0.000 0 0 
       1  90 LEU QB 132 no  100.0   0.0 0.000 0.000 0.000  2  0 no 0.000 0 0 
       1 122 SER QB  29 no    5.0 100.0 0.002 0.002 0.000 12  2 no 0.000 0 0 
       1 125 LEU QB  51 no  100.0   0.0 0.000 0.000 0.000  9  2 no 0.000 0 0 
       1 125 LEU QD  20 no   80.0 100.0 0.072 0.072 0.000 14  2 no 0.000 0 0 
       1 128 ILE QG  77 no   10.0 100.0 0.000 0.000 0.000  7  0 no 0.000 0 0 
       1 130 GLY QA  59 no  100.0   0.0 0.000 0.000 0.000  8  0 no 0.000 0 0 
       1 133 CYS QB  31 no    5.0 100.0 0.001 0.001 0.000 12  3 no 0.000 0 0 
       1 136 CYS QB  65 no   15.0 100.0 0.003 0.003 0.000  8  2 no 0.000 0 0 
       1 137 VAL QG  11 no   65.0 100.0 0.024 0.024 0.000 16  2 no 0.000 0 0 
       1 138 HIS QB  69 no  100.0   0.0 0.000 0.000 0.000  8  3 no 0.000 0 0 
       1 140 ILE QG  76 no   85.0 100.0 0.016 0.016 0.000  7  0 no 0.000 0 0 
       1 141 GLU QB  84 no  100.0 100.0 0.331 0.331 0.000  7  2 no 0.000 0 0 
       1 142 GLY QA 136 no  100.0   0.0 0.000 0.000 0.000  1  1 no 0.000 0 0 
       1 143 MET QB 106 no  100.0   0.0 0.000 0.000 0.000  5  0 no 0.000 0 0 
       1 144 ILE QG  90 no   70.0 100.0 0.012 0.012 0.000  6  0 no 0.000 0 0 
       1 145 SER QB  52 no   85.0  82.3 2.426 2.947 0.521  9  3 no 0.000 0 0 
       1 146 GLN QB  62 no   40.0 100.0 0.003 0.003 0.000  8  1 no 0.000 0 0 
       1 146 GLN QE 126 yes 100.0 100.0 0.521 0.521 0.000  4  2 no 0.000 0 0 
       1 146 GLN QG  64 no  100.0   0.0 0.000 0.000 0.000  8  2 no 0.000 0 0 
       1 147 LEU QB  46 no  100.0   0.0 0.000 0.000 0.000  9  0 no 0.000 0 0 
       1 148 GLU QB 135 no  100.0   0.0 0.000 0.000 0.000  1  0 no 0.000 0 0 
       1 148 GLU QG 105 no   45.0 100.0 0.020 0.020 0.000  5  0 no 0.000 0 0 
       1 149 GLY QA  15 no  100.0   0.0 0.000 0.000 0.000 15  3 no 0.000 0 0 
       1 150 VAL QG  19 no   35.0 100.0 0.059 0.059 0.000 14  1 no 0.000 0 0 
       1 151 GLN QB  99 no   25.0 100.0 0.012 0.012 0.000  6  2 no 0.000 0 0 
       1 151 GLN QE  57 yes 100.0 100.0 0.984 0.984 0.000  9  6 no 0.000 0 0 
       1 151 GLN QG  83 no   15.0 100.0 0.093 0.093 0.000  7  2 no 0.000 0 0 
       1 152 GLN QB  44 no   90.0  75.4 0.224 0.297 0.073 10  6 no 0.000 0 0 
       1 152 GLN QG  96 no   55.0 100.0 0.043 0.043 0.000  6  1 no 0.000 0 0 
       1 153 ILE QG  26 no   20.0 100.0 0.011 0.011 0.000 13  4 no 0.000 0 0 
       1 154 SER QB  50 no   85.0 100.0 0.169 0.169 0.000  9  2 no 0.000 0 0 
       1 156 SER QB 104 no  100.0   0.0 0.000 0.000 0.000  5  0 no 0.000 0 0 
       1 157 LEU QB 111 no  100.0   0.0 0.000 0.000 0.000  5  2 no 0.000 0 0 
       1 157 LEU QD   1 no   40.0 100.0 0.017 0.017 0.000 30  9 no 0.000 0 0 
       1 159 GLU QB  49 no   40.0 100.0 0.028 0.028 0.000  9  1 no 0.000 0 0 
       1 160 GLY QA  30 no  100.0 100.0 0.311 0.311 0.000 12  3 no 0.000 0 0 
       1 164 VAL QG   7 no  100.0   0.0 0.000 0.000 0.000 18  5 no 0.000 0 0 
       1 165 LEU QB  27 no    5.0 100.0 0.005 0.005 0.000 13  5 no 0.000 0 0 
       1 165 LEU QD  10 no  100.0 100.0 0.701 0.701 0.000 17  7 no 0.000 0 0 
       1 166 TYR QB  43 no  100.0 100.0 0.125 0.125 0.000 10  4 no 0.000 0 0 
       1 167 ASN QB  13 no   85.0 100.0 0.483 0.483 0.000 16  6 no 0.000 0 0 
       1 167 ASN QD  12 no   90.0  11.6 0.006 0.050 0.044 16  3 no 0.673 0 2 
       1 168 PRO QB 116 no  100.0   0.0 0.000 0.000 0.000  4  0 no 0.000 0 0 
       1 168 PRO QD  25 no  100.0   0.0 0.000 0.000 0.000 13  4 no 0.000 0 0 
       1 171 ILE QG  82 no   65.0 100.0 0.082 0.082 0.000  7  2 no 0.009 0 0 
       1 172 SER QB 102 no   50.0 100.0 0.273 0.273 0.000  6  4 no 0.000 0 0 
       1 173 PRO QD  58 no  100.0 100.0 0.593 0.593 0.000  8  0 no 0.000 0 0 
       1 174 GLU QB 128 no  100.0   0.0 0.000 0.000 0.000  3  0 no 0.000 0 0 
       1 174 GLU QG  95 no   15.0 100.0 0.001 0.001 0.000  6  1 no 0.000 0 0 
       1 175 GLU QB 110 no   10.0 100.0 0.004 0.004 0.000  5  2 no 0.000 0 0 
       1 175 GLU QG  54 no   80.0 100.0 0.172 0.172 0.000  9  4 no 0.000 0 0 
       1 176 LEU QD   3 no  100.0   0.0 0.000 0.000 0.000 28  5 no 0.000 0 0 
       1 182 ASP QB  75 no  100.0   0.0 0.000 0.000 0.000  7  0 no 0.000 0 0 
       1 183 MET QB  80 no  100.0 100.0 0.598 0.598 0.000  7  1 no 0.000 0 0 
       1 184 GLY QA 121 no  100.0   0.0 0.000 0.000 0.000  4  1 no 0.000 0 0 
       1 185 PHE QB  36 no  100.0 100.0 0.817 0.817 0.000 10  0 no 0.000 0 0 
       1 186 GLU QB  74 no  100.0   0.0 0.000 0.000 0.000  7  0 no 0.000 0 0 
       1 186 GLU QG  35 no   80.0 100.0 0.147 0.147 0.000 10  0 no 0.000 0 0 
       1 188 SER QB  45 no  100.0   0.0 0.000 0.000 0.000  9  0 no 0.000 0 0 
       1 189 VAL QG  37 no   15.0 100.0 0.002 0.002 0.000 10  1 no 0.000 0 0 
       1 190 VAL QG 103 no   60.0 100.0 0.285 0.285 0.000  5  0 no 0.000 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Tuesday, July 2, 2024 10:16:11 AM GMT (wattos1)