NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
473618 2jo6 15139 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2jo6


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        74
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.001
    _Stereo_assign_list.Total_e_high_states  102.027
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1   5 SER QB 67 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.018 0 0 
       1   7 TRP QB 66 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.008 0 0 
       1   8 LYS QB 73 no 100.0   0.0  0.000  0.000 0.000  2  2 no 0.001 0 0 
       1  10 ILE QG 16 no 100.0   0.0  0.000  0.000 0.000  8  2 no 0.003 0 0 
       1  11 CYS QB 65 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  12 LYS QB 22 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1  13 ILE QG 31 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.002 0 0 
       1  14 ASP QB 64 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.003 0 0 
       1  15 ASP QB 63 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.019 0 0 
       1  17 LEU QB 40 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.012 0 0 
       1  17 LEU QD 74 no  30.0 100.0  0.005  0.005 0.000  1  0 no 0.000 0 0 
       1  18 PRO QG 62 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.015 0 0 
       1  21 GLY QA 15 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.009 0 0 
       1  22 VAL QG 44 no 100.0 100.0  0.255  0.255 0.000  3  0 no 0.000 0 0 
       1  25 LEU QD 39 no 100.0 100.0  2.054  2.054 0.000  4  0 no 0.007 0 0 
       1  26 LEU QB 43 no 100.0   0.0  0.000  0.000 0.000  4  4 no 0.000 0 0 
       1  26 LEU QD  6 no  90.0 100.0  0.965  0.966 0.000 16  5 no 0.011 0 0 
       1  27 GLY QA 38 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.005 0 0 
       1  29 GLU QB 72 no 100.0   0.0  0.000  0.000 0.000  2  2 no 0.021 0 0 
       1  30 GLN QE 61 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.007 0 0 
       1  30 GLN QG 60 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.009 0 0 
       1  31 VAL QG  1 no 100.0 100.0 15.114 15.114 0.000 38 15 no 0.021 0 0 
       1  36 PRO QB 26 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.011 0 0 
       1  36 PRO QD 12 no 100.0   0.0  0.000  0.000 0.000 10  0 no 0.014 0 0 
       1  36 PRO QG 59 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  37 TYR QB 58 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  39 SER QB 57 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  42 VAL QG 23 no 100.0 100.0  1.018  1.018 0.000  6  1 no 0.000 0 0 
       1  43 PHE QB 30 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.005 0 0 
       1  46 SER QB 21 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.002 0 0 
       1  47 ASN QB 56 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.009 0 0 
       1  49 ASP QB 55 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.005 0 0 
       1  50 PRO QG 71 no 100.0   0.0  0.000  0.000 0.000  2  2 no 0.000 0 0 
       1  55 SER QB 54 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.008 0 0 
       1  56 VAL QG 70 no  95.0 100.0  1.735  1.735 0.000  2  2 no 0.009 0 0 
       1  57 LEU QD 18 no 100.0 100.0  0.482  0.482 0.000  7  2 no 0.006 0 0 
       1  60 GLY QA 53 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  61 LEU QD 52 no 100.0 100.0  3.232  3.232 0.000  2  0 no 0.005 0 0 
       1  64 GLU QG 20 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.017 0 0 
       1  65 HIS QB 37 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.003 0 0 
       1  68 GLU QB 51 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.002 0 0 
       1  68 GLU QG 50 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.005 0 0 
       1  69 LEU QB 69 no 100.0   0.0  0.000  0.000 0.000  2  2 no 0.000 0 0 
       1  69 LEU QD 11 no 100.0 100.0  6.720  6.720 0.000 12  2 no 0.011 0 0 
       1  71 VAL QG 13 no 100.0 100.0  9.420  9.420 0.000 10  2 no 0.004 0 0 
       1  75 LEU QD 42 no 100.0   0.0  0.000  0.000 0.000  4  2 no 0.009 0 0 
       1  76 LYS QB 36 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.010 0 0 
       1  76 LYS QG 35 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.010 0 0 
       1  81 ARG QB 49 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.001 0 0 
       1  81 ARG QD 48 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.001 0 0 
       1  81 ARG QG 34 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  82 LEU QD  2 no 100.0 100.0  4.309  4.309 0.000 32  8 no 0.007 0 0 
       1  85 GLY QA 41 no 100.0   0.0  0.000  0.000 0.000  4  2 no 0.000 0 0 
       1  86 LEU QD  7 no 100.0 100.0 10.398 10.398 0.000 15  0 no 0.010 0 0 
       1  94 SER QB 47 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  95 VAL QG  8 no 100.0 100.0  6.922  6.922 0.000 15  6 no 0.007 0 0 
       1  96 LYS QB 46 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.012 0 0 
       1  96 LYS QG 45 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.007 0 0 
       1  97 HIS QB 33 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.013 0 0 
       1  98 TYR QB 29 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.001 0 0 
       1  99 GLU QB 17 no   0.0   0.0  0.000  0.000 0.000  8  4 no 0.009 0 0 
       1 102 VAL QG  3 no 100.0 100.0  9.079  9.079 0.000 21  5 no 0.007 0 0 
       1 103 LYS QB 25 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.023 0 0 
       1 103 LYS QD 28 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.015 0 0 
       1 104 ASP QB 68 no 100.0   0.0  0.000  0.000 0.000  2  2 no 0.009 0 0 
       1 105 GLY QA 24 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.000 0 0 
       1 106 VAL QG  9 no 100.0 100.0  8.374  8.374 0.000 14  4 no 0.014 0 0 
       1 107 VAL QG  4 no 100.0 100.0 14.420 14.420 0.000 19  4 no 0.000 0 0 
       1 108 GLN QB 32 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.003 0 0 
       1 108 GLN QE 10 no  40.0  99.3  0.013  0.013 0.000 13  8 no 0.015 0 0 
       1 109 LEU QD  5 no 100.0 100.0  7.510  7.510 0.000 19  6 no 0.006 0 0 
       1 110 ARG QB 27 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.009 0 0 
       1 110 ARG QD 19 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.013 0 0 
       1 111 GLY QA 14 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.017 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Wednesday, May 15, 2024 6:29:14 PM GMT (wattos1)