NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id cing stage program type subtype subsubtype
463912 2ysx cing 4-filtered-FRED Wattos check stereo assignment distance


data_2ysx


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        113
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.002
    _Stereo_assign_list.Total_e_high_states  378.388
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1   9 VAL QG  92 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  10 PRO QB 113 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  10 PRO QD 112 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  11 CYS QB  74 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.004 0 0 
       1  12 TRP QB  50 no 100.0 100.0  1.330  1.330 0.000  9  5 no 0.000 0 0 
       1  13 ASN QB  69 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1  13 ASN QD  95 no 100.0   0.0  0.000  0.000 0.000  4  4 no 0.001 0 0 
       1  14 HIS QB  28 no 100.0 100.0  0.687  0.687 0.000 15  8 no 0.008 0 0 
       1  15 GLY QA 111 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  16 ASN QB  91 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.002 0 0 
       1  17 ILE QG  44 no 100.0 100.0  1.209  1.209 0.000 10  3 no 0.000 0 0 
       1  19 ARG QG 110 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.058 0 0 
       1  21 LYS QB  68 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1  21 LYS QE  73 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.003 0 0 
       1  21 LYS QG  43 no 100.0   0.0  0.000  0.000 0.000 10  2 no 0.000 0 0 
       1  23 GLU QG  67 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1  24 GLU QB  90 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.023 0 0 
       1  24 GLU QG  89 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  25 LEU QB  47 no 100.0 100.0  0.959  0.959 0.000 10  5 no 0.000 0 0 
       1  25 LEU QD  11 no 100.0 100.0 11.673 11.673 0.000 30 11 no 0.016 0 0 
       1  26 LEU QB  20 no 100.0 100.0  2.600  2.600 0.000 18 11 no 0.001 0 0 
       1  26 LEU QD  18 no 100.0   0.0  0.000  0.000 0.000 18  8 no 0.007 0 0 
       1  27 SER QB 109 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  28 ARG QB  66 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1  28 ARG QG  88 no   0.0   0.0  0.000  0.000 0.000  4  0 no 0.011 0 0 
       1  31 LYS QB  38 no 100.0 100.0  0.704  0.704 0.000 12  2 no 0.000 0 0 
       1  31 LYS QD  77 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.000 0 0 
       1  33 GLY QA  49 no 100.0 100.0  1.232  1.232 0.000  9  5 no 0.001 0 0 
       1  34 SER QB  72 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.000 0 0 
       1  35 PHE QB  36 no 100.0 100.0  1.018  1.018 0.000 13  7 no 0.000 0 0 
       1  35 PHE QD  22 no 100.0 100.0 49.795 49.795 0.000 17  5 no 0.000 0 0 
       1  35 PHE QE  24 no 100.0 100.0 63.025 63.025 0.000 17  7 no 0.000 0 0 
       1  36 LEU QB  46 no 100.0 100.0  0.428  0.428 0.000 10  5 no 0.000 0 0 
       1  36 LEU QD   1 no 100.0 100.0 38.356 38.356 0.000 43 17 no 0.003 0 0 
       1  37 VAL QG   6 no 100.0 100.0 21.182 21.182 0.000 34 10 no 0.000 0 0 
       1  38 ARG QB  39 no 100.0 100.0  1.424  1.424 0.000 12  6 no 0.002 0 0 
       1  38 ARG QD  71 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.000 0 0 
       1  40 SER QB  65 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1  41 GLU QG 108 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  43 ILE QG  87 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  45 ARG QD 107 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.017 0 0 
       1  47 TYR QB  25 no 100.0 100.0  0.957  0.957 0.000 16  5 no 0.000 0 0 
       1  49 LEU QB  15 no 100.0 100.0  2.409  2.409 0.000 21 14 no 0.000 0 0 
       1  49 LEU QD   7 no 100.0 100.0 14.616 14.616 0.000 34 23 no 0.006 0 0 
       1  50 CYS QB  26 no 100.0 100.0  0.870  0.870 0.000 16  8 no 0.000 0 0 
       1  51 VAL QG   8 no 100.0 100.0 20.527 20.527 0.000 33 13 no 0.000 0 0 
       1  52 LEU QB  17 no 100.0 100.0  1.561  1.561 0.000 19 10 no 0.000 0 0 
       1  52 LEU QD   5 no 100.0 100.0 27.456 27.456 0.000 34  7 no 0.001 0 0 
       1  54 ARG QB 106 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.021 0 0 
       1  54 ARG QG  64 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1  57 VAL QG  10 no 100.0 100.0 19.841 19.841 0.000 31  3 no 0.014 0 0 
       1  58 TYR QB  86 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  60 TYR QB  14 no 100.0 100.0  0.605  0.605 0.000 21 12 no 0.004 0 0 
       1  61 ARG QB  85 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  61 ARG QG 105 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.012 0 0 
       1  62 ILE QG  55 no 100.0 100.0  0.414  0.414 0.000  8  2 no 0.003 0 0 
       1  63 LEU QD  29 no 100.0   0.0  0.000  0.000 0.000 14  4 no 0.006 0 0 
       1  64 PRO QD  27 no 100.0 100.0  0.126  0.126 0.000 15  4 no 0.021 0 0 
       1  65 ASN QB 104 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  66 GLU QB 103 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  66 GLU QG 102 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  67 ASP QB  40 no  50.0 100.0  0.015  0.015 0.000 11  2 no 0.007 0 0 
       1  69 LYS QB  30 no 100.0 100.0  0.765  0.765 0.000 13  0 no 0.000 0 0 
       1  69 LYS QD  84 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.001 0 0 
       1  69 LYS QG  54 no 100.0   0.0  0.000  0.000 0.000  8  2 no 0.000 0 0 
       1  70 PHE QB  42 no 100.0 100.0  0.492  0.492 0.000 11  5 no 0.004 0 0 
       1  72 VAL QG  13 no 100.0 100.0  7.151  7.151 0.000 23 10 no 0.011 0 0 
       1  73 GLN QB 101 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  78 VAL QG  63 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1  80 MET QG  83 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.072 0 0 
       1  81 ARG QB  45 no 100.0   0.0  0.000  0.000 0.000 10  4 no 0.000 0 0 
       1  81 ARG QD  58 no 100.0   0.0  0.000  0.000 0.000  8  4 no 0.000 0 0 
       1  81 ARG QG 100 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  83 PHE QB  59 no 100.0 100.0  0.182  0.182 0.000  8  7 no 0.000 0 0 
       1  85 LYS QB  21 no 100.0 100.0  0.877  0.877 0.000 17  4 no 0.000 0 0 
       1  85 LYS QD  70 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.006 0 0 
       1  86 LEU QB  53 no  70.0 100.0  0.128  0.128 0.000  8  2 no 0.000 0 0 
       1  86 LEU QD   9 no 100.0 100.0  7.931  7.931 0.000 32 15 no 0.003 0 0 
       1  87 ASP QB  62 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.002 0 0 
       1  88 GLN QB  33 no  10.0 100.0  0.001  0.001 0.000 13  4 no 0.000 0 0 
       1  89 LEU QB  19 no 100.0 100.0  0.476  0.476 0.000 18  9 no 0.000 0 0 
       1  89 LEU QD   4 no 100.0 100.0 21.373 21.373 0.000 35 14 no 0.000 0 0 
       1  90 ILE QG  32 no  85.0 100.0  0.045  0.045 0.000 13  4 no 0.000 0 0 
       1  91 GLU QB  82 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  91 GLU QG  81 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.040 0 0 
       1  92 PHE QB  37 no  90.0 100.0  0.112  0.112 0.000 12  0 no 0.003 0 0 
       1  93 TYR QB  23 no 100.0 100.0  2.072  2.072 0.000 17  7 no 0.000 0 0 
       1  94 LYS QB  48 no 100.0 100.0  0.019  0.019 0.000  9  0 no 0.000 0 0 
       1  94 LYS QE  61 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1  94 LYS QG  52 no 100.0   0.0  0.000  0.000 0.000  8  2 no 0.008 0 0 
       1  95 LYS QD  99 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  95 LYS QG  51 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.000 0 0 
       1  96 GLU QB  80 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.015 0 0 
       1  96 GLU QG  79 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.044 0 0 
       1  97 ASN QB  98 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 100 LEU QB  31 no 100.0 100.0  1.107  1.107 0.000 13  4 no 0.001 0 0 
       1 100 LEU QD   3 no 100.0 100.0  9.534  9.534 0.000 37 20 no 0.002 0 0 
       1 101 VAL QG  12 no 100.0 100.0  5.203  5.203 0.000 23  2 no 0.000 0 0 
       1 103 HIS QB  78 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 104 LEU QB  35 no 100.0 100.0  1.077  1.077 0.000 13  7 no 0.008 0 0 
       1 104 LEU QD   2 no 100.0 100.0 27.150 27.150 0.000 37 20 no 0.007 0 0 
       1 105 GLN QB  41 no 100.0 100.0  0.592  0.592 0.000 11  4 no 0.001 0 0 
       1 105 GLN QE  76 no 100.0 100.0  0.728  0.728 0.000  6  4 no 0.001 0 0 
       1 105 GLN QG  97 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 106 TYR QB  34 no 100.0 100.0  1.569  1.569 0.000 13  5 no 0.046 0 0 
       1 107 PRO QB  57 no 100.0   0.0  0.000  0.000 0.000  8  4 no 0.000 0 0 
       1 107 PRO QD  75 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.046 0 0 
       1 108 VAL QG  94 no 100.0   0.0  0.000  0.000 0.000  4  2 no 0.000 0 0 
       1 109 PRO QB  60 no 100.0 100.0  1.007  1.007 0.000  7  2 no 0.004 0 0 
       1 109 PRO QD  96 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 110 LEU QB  56 no 100.0   0.0  0.000  0.000 0.000  8  4 no 0.000 0 0 
       1 110 LEU QD  16 no 100.0 100.0  3.777  3.777 0.000 20  7 no 0.008 0 0 
       1 111 GLU QG  93 no 100.0   0.0  0.000  0.000 0.000  4  2 no 0.016 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Sunday, June 30, 2024 12:17:45 PM GMT (wattos1)