NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id cing stage program type subtype subsubtype
463894 2yst cing 4-filtered-FRED Wattos check stereo assignment distance


data_2yst


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        132
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.036
    _Stereo_assign_list.Total_e_high_states  338.714
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1   8 ASN QB 132 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  11 SER QB 114 no 100.0   0.0  0.000  0.003 0.003  4  0 no 0.236 0 0 
       1  12 PRO QB  53 no 100.0   0.0  0.000  0.000 0.000 10  0 no 0.008 0 0 
       1  12 PRO QD  91 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.000 0 0 
       1  12 PRO QG 113 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.013 0 0 
       1  13 ARG QB 112 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  13 ARG QG 131 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  14 PHE QB  74 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.067 0 0 
       1  15 GLU QB 111 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  15 GLU QG  73 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.052 0 0 
       1  16 LYS QB  72 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.000 0 0 
       1  16 LYS QD  61 no  95.0  99.9  0.868  0.869 0.001  9  0 no 0.111 0 0 
       1  16 LYS QG  31 no 100.0 100.0  1.759  1.760 0.001 15  0 no 0.072 0 0 
       1  18 VAL QG  71 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.007 0 0 
       1  20 GLU QB  54 no 100.0 100.0  1.632  1.633 0.000 10  1 no 0.066 0 0 
       1  20 GLU QG  23 no 100.0 100.0  3.165  3.165 0.000 18  7 no 0.012 0 0 
       1  22 ASP QB  79 no 100.0   0.0  0.000  0.000 0.000  8  4 no 0.000 0 0 
       1  23 LEU QB  46 no 100.0   0.0  0.000  0.000 0.000 12  4 no 0.000 0 0 
       1  23 LEU QD  12 no 100.0 100.0  8.256  8.256 0.000 30 11 no 0.016 0 0 
       1  25 GLU QB  24 no 100.0 100.0  2.182  2.182 0.000 17  0 no 0.019 0 0 
       1  25 GLU QG  52 no 100.0   0.0  0.000  0.000 0.000 10  0 no 0.009 0 0 
       1  26 ASN QB 130 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  27 SER QB  42 no 100.0   0.0  0.000  0.000 0.000 12  2 no 0.012 0 0 
       1  29 PRO QB  80 no 100.0 100.0  0.588  0.588 0.000  7  2 no 0.000 0 0 
       1  29 PRO QD 110 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  29 PRO QG 117 no 100.0   0.0  0.000  0.000 0.000  4  2 no 0.048 0 0 
       1  32 PRO QB  49 no 100.0 100.0  1.518  1.518 0.000 11  3 no 0.007 0 0 
       1  32 PRO QD 109 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  33 ILE QG  25 no 100.0 100.0  0.945  0.945 0.000 17  3 no 0.009 0 0 
       1  34 LEU QB  78 no 100.0   0.0  0.000  0.000 0.000  8  4 no 0.000 0 0 
       1  34 LEU QD   4 no 100.0 100.0 26.736 26.736 0.001 40  8 no 0.097 0 0 
       1  35 GLN QB 108 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  35 GLN QE 129 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  35 GLN QG  85 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.006 0 0 
       1  36 LEU QB  18 no 100.0 100.0  1.267  1.267 0.000 22  6 no 0.033 0 0 
       1  36 LEU QD  16 no   0.0   0.0  0.000  0.000 0.000 24  8 no 0.044 0 0 
       1  37 ARG QB  70 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.007 0 0 
       1  40 ASP QB 107 no 100.0   0.0  0.000  0.003 0.003  4  0 no 0.200 0 0 
       1  41 LEU QB  84 no 100.0   0.0  0.000  0.003 0.003  6  0 no 0.119 0 0 
       1  41 LEU QD  69 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.006 0 0 
       1  42 ASP QB 106 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.064 0 0 
       1  43 VAL QG  68 no 100.0   0.0  0.000  0.002 0.002  8  0 no 0.127 0 0 
       1  45 VAL QG  67 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.000 0 0 
       1  46 ASN QB 128 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  48 GLN QB 105 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  48 GLN QG 104 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.044 0 0 
       1  49 ILE QG 103 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  51 TYR QB  22 no 100.0 100.0  0.991  0.991 0.000 18  7 no 0.008 0 0 
       1  52 VAL QG   9 no 100.0 100.0 33.224 33.224 0.000 35 12 no 0.026 0 0 
       1  53 PHE QB  62 no 100.0 100.0  1.698  1.698 0.000  9  1 no 0.023 0 0 
       1  54 GLY QA  32 no 100.0 100.0  0.986  0.986 0.000 15  4 no 0.004 0 0 
       1  58 GLU QB 102 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  60 VAL QG  17 no 100.0   0.0  0.000  0.000 0.000 22  4 no 0.011 0 0 
       1  61 ARG QB  90 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.000 0 0 
       1  61 ARG QD  59 no 100.0   0.0  0.000  0.000 0.000 10  4 no 0.024 0 0 
       1  61 ARG QG  83 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.031 0 0 
       1  62 ARG QG  51 no 100.0   0.0  0.000  0.003 0.003 10  0 no 0.187 0 0 
       1  63 LEU QB  77 no 100.0   0.0  0.000  0.000 0.000  8  4 no 0.000 0 0 
       1  63 LEU QD  45 no 100.0   0.0  0.000  0.000 0.000 12  4 no 0.023 0 0 
       1  64 LEU QB  58 no 100.0   0.0  0.000  0.000 0.000 10  4 no 0.000 0 0 
       1  64 LEU QD   7 no 100.0 100.0 24.129 24.130 0.001 37 11 no 0.066 0 0 
       1  65 ARG QB  30 no 100.0 100.0  6.104  6.104 0.000 16  6 no 0.006 0 0 
       1  65 ARG QD  89 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.062 0 0 
       1  65 ARG QG  75 no 100.0   0.0  0.000  0.000 0.000  8  2 no 0.014 0 0 
       1  66 LEU QB  57 no 100.0   0.0  0.000  0.000 0.000 10  4 no 0.000 0 0 
       1  66 LEU QD  13 no 100.0   0.0  0.000  0.000 0.000 30 16 no 0.022 0 0 
       1  67 ASP QB  34 no 100.0   0.0  0.000  0.000 0.000 14  0 no 0.003 0 0 
       1  68 GLU QB  41 no   0.0   0.0  0.000  0.004 0.004 12  2 no 0.139 0 0 
       1  70 SER QB 101 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.021 0 0 
       1  71 GLY QA  56 no 100.0   0.0  0.000  0.000 0.000 10  4 no 0.008 0 0 
       1  73 LEU QB  15 no 100.0 100.0  1.977  1.977 0.000 26  7 no 0.026 0 0 
       1  73 LEU QD  11 no 100.0   0.0  0.000  0.000 0.000 30  8 no 0.022 0 0 
       1  74 SER QB  26 no 100.0 100.0  1.327  1.327 0.000 17  8 no 0.022 0 0 
       1  75 VAL QG   1 no 100.0 100.0 52.664 52.665 0.002 46 11 no 0.062 0 0 
       1  76 LEU QB  19 no 100.0 100.0  2.723  2.723 0.000 21  7 no 0.029 0 0 
       1  76 LEU QD  10 no 100.0 100.0 14.525 14.525 0.000 32 12 no 0.062 0 0 
       1  77 HIS QB  38 no 100.0 100.0  1.801  1.801 0.000 12  1 no 0.026 0 0 
       1  78 ARG QG 100 no 100.0   0.0  0.000  0.005 0.005  4  0 no 0.233 0 0 
       1  79 ILE QG  36 no 100.0 100.0  1.408  1.408 0.000 13  2 no 0.030 0 0 
       1  80 ASP QB  21 no 100.0 100.0  1.035  1.035 0.000 18  7 no 0.012 0 0 
       1  81 ARG QB  82 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1  81 ARG QG  81 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.014 0 0 
       1  82 GLU QB  99 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  82 GLU QG  98 no 100.0   0.0  0.000  0.001 0.001  4  0 no 0.115 0 0 
       1  83 GLU QB  47 no 100.0 100.0  1.480  1.480 0.000 12  6 no 0.002 0 0 
       1  83 GLU QG  55 no 100.0   0.0  0.000  0.000 0.000 10  4 no 0.000 0 0 
       1  84 VAL QG  14 no 100.0 100.0  5.596  5.597 0.000 26  7 no 0.038 0 0 
       1  85 ASN QB  66 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.012 0 0 
       1  86 GLN QB  97 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  86 GLN QE 119 no 100.0   0.0  0.000  0.000 0.000  4  4 no 0.000 0 0 
       1  86 GLN QG  33 no 100.0 100.0  2.045  2.045 0.000 15  5 no 0.010 0 0 
       1  87 LEU QB  35 no 100.0   0.0  0.000  0.000 0.000 14  8 no 0.000 0 0 
       1  87 LEU QD  44 no 100.0   0.0  0.000  0.000 0.000 12  4 no 0.016 0 0 
       1  88 ARG QB  43 no 100.0 100.0  1.543  1.544 0.000 12  4 no 0.067 0 0 
       1  89 PHE QB 118 no 100.0   0.0  0.000  0.000 0.000  4  4 no 0.000 0 0 
       1  91 VAL QG   3 no 100.0 100.0 18.555 18.555 0.000 41  3 no 0.019 0 0 
       1  92 MET QB  40 no 100.0   0.0  0.000  0.000 0.000 12  2 no 0.000 0 0 
       1  92 MET QG   8 no 100.0 100.0  1.478  1.478 0.000 35 10 no 0.036 0 0 
       1  94 ARG QB  96 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  94 ARG QD  48 no 100.0 100.0  3.605  3.605 0.000 12  8 no 0.024 0 0 
       1  94 ARG QG  86 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.000 0 0 
       1  95 ASP QB  95 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.012 0 0 
       1  96 ARG QB 127 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  96 ARG QG  94 no 100.0   0.0  0.000  0.001 0.001  4  0 no 0.137 0 0 
       1  97 GLY QA 126 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  98 GLN QB  93 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  99 PRO QB  88 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.000 0 0 
       1 100 PRO QB  39 no 100.0 100.0  1.969  1.969 0.000 12  2 no 0.016 0 0 
       1 100 PRO QD  50 no 100.0 100.0  1.500  1.500 0.000 11  4 no 0.000 0 0 
       1 100 PRO QG  76 no  95.0 100.0  0.547  0.547 0.000  8  3 no 0.017 0 0 
       1 101 LYS QB  87 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.000 0 0 
       1 101 LYS QD 125 no   0.0   0.0  0.000  0.000 0.000  2  0 no 0.033 0 0 
       1 101 LYS QG 124 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 103 ASP QB  65 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.000 0 0 
       1 104 LYS QG  29 no 100.0   0.0  0.000  0.000 0.000 16  4 no 0.006 0 0 
       1 107 VAL QG   2 no 100.0 100.0 32.294 32.294 0.000 42 10 no 0.023 0 0 
       1 108 VAL QG   6 no 100.0 100.0 34.923 34.923 0.000 38 13 no 0.020 0 0 
       1 109 LEU QB  20 no 100.0 100.0  1.522  1.522 0.000 21  8 no 0.000 0 0 
       1 109 LEU QD   5 no 100.0 100.0 31.406 31.406 0.000 38  8 no 0.013 0 0 
       1 110 ASN QB  37 no 100.0 100.0  1.698  1.698 0.000 13  4 no 0.003 0 0 
       1 110 ASN QD  60 no 100.0 100.0  1.250  1.250 0.000 10  8 no 0.000 0 0 
       1 111 ILE QG  64 no 100.0 100.0  0.379  0.379 0.000  8  0 no 0.000 0 0 
       1 112 LYS QB  27 no 100.0 100.0  3.378  3.378 0.000 16  2 no 0.036 0 0 
       1 112 LYS QD 116 no 100.0   0.0  0.000  0.000 0.000  4  2 no 0.041 0 0 
       1 112 LYS QE 115 no 100.0   0.0  0.000  0.000 0.000  4  2 no 0.014 0 0 
       1 112 LYS QG  28 no 100.0   0.0  0.000  0.000 0.000 16  4 no 0.006 0 0 
       1 113 ASP QB 123 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 114 GLU QB  63 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.047 0 0 
       1 115 ASN QB  92 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 116 ASP QB 122 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.065 0 0 
       1 118 VAL QG 121 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 119 PRO QD 120 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Sunday, June 30, 2024 12:54:04 PM GMT (wattos1)