NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id cing stage program type subtype subsubtype
451931 2rpv cing 4-filtered-FRED Wattos check stereo assignment distance


data_2rpv


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        72
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       3
    _Stereo_assign_list.Deassign_percentage  4.2
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   9.950
    _Stereo_assign_list.Total_e_high_states  209.729
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  2 TYR QB 61 no 100.0   0.0  0.000  0.000 0.000  4  2 no  0.000  0  0 
       1  4 ASP QB 48 no 100.0   0.0  0.000  0.000 0.000  6  0 no  0.011  0  0 
       1  6 ASN QB 33 no 100.0  99.9  0.600  0.601 0.000  8  0 no  0.054  0  0 
       1  7 ASN QD 50 no 100.0 100.0  0.604  0.604 0.000  5  0 no  0.000  0  0 
       1  8 ASP QB 71 no 100.0   0.0  0.000  0.000 0.000  2  0 no  0.000  0  0 
       1  9 GLY QA 58 no 100.0 100.0  0.929  0.929 0.000  4  0 no  0.007  0  0 
       1 11 TYR QE 17 no 100.0 100.0 34.645 34.646 0.001 14  2 no  0.070  0  0 
       1 12 GLU QB 26 no 100.0 100.0  1.186  1.186 0.000 10  2 no  0.000  0  0 
       1 12 GLU QG 27 no 100.0 100.0  2.019  2.019 0.000 10  4 no  0.024  0  0 
       1 13 GLY QA 72 no 100.0   0.0  0.000  0.000 0.000  2  2 no  0.000  0  0 
       1 15 GLU QB  6 no 100.0 100.0  2.590  2.590 0.000 20  0 no  0.010  0  0 
       1 16 LEU QB 32 no 100.0 100.0  0.722  0.722 0.000  8  0 no  0.017  0  0 
       1 16 LEU QD 22 no 100.0   0.0  0.000  0.000 0.000 12  0 no  0.019  0  0 
       1 17 SER QB 47 no 100.0   0.0  0.000  0.000 0.000  6  0 no  0.026  0  0 
       1 20 MET QB 14 no 100.0 100.0  5.327  5.328 0.000 15  2 no  0.019  0  0 
       1 20 MET QG 16 no 100.0  99.9  2.321  2.323 0.001 14  0 no  0.040  0  0 
       1 21 GLU QB 46 no 100.0 100.0  3.090  3.091 0.001  6  0 no  0.064  0  0 
       1 21 GLU QG 45 no 100.0   0.0  0.000  0.000 0.000  6  0 no  0.000  0  0 
       1 22 TYR QB 11 no 100.0 100.0  4.717  4.717 0.000 15  0 no  0.017  0  0 
       1 23 LYS QB 44 no 100.0   0.0  0.000  0.001 0.001  6  0 no  0.123  0  0 
       1 24 LEU QB 20 no 100.0 100.0  1.106  1.106 0.000 13  5 no  0.000  0  0 
       1 24 LEU QD  5 no 100.0 100.0 34.101 34.101 0.000 25 12 no  0.032  0  0 
       1 25 ILE QG 57 no 100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       1 26 LEU QB 10 no 100.0 100.0  8.005  8.005 0.000 16  4 no  0.011  0  0 
       1 26 LEU QD  2 no 100.0  91.1 29.877 32.788 2.911 29  8 yes 1.989 18 18 
       1 27 ASN QB  8 no 100.0 100.0  2.317  2.317 0.000 19  2 no  0.019  0  0 
       1 27 ASN QD 13 no 100.0 100.0  2.147  2.147 0.000 15  2 no  0.016  0  0 
       1 28 GLY QA  4 no 100.0 100.0  0.969  0.969 0.000 25  9 no  0.003  0  0 
       1 29 LYS QE 70 no 100.0   0.0  0.000  0.000 0.000  2  0 no  0.000  0  0 
       1 29 LYS QG 69 no 100.0   0.0  0.000  0.000 0.000  2  0 no  0.000  0  0 
       1 31 LEU QB 35 no 100.0   0.0  0.000  0.000 0.000  8  4 no  0.000  0  0 
       1 31 LEU QD 36 no 100.0   0.0  0.000  0.000 0.000  8  6 no  0.000  0  0 
       1 32 LYS QB 56 no 100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       1 32 LYS QE 62 no 100.0   0.0  0.000  0.000 0.000  4  4 no  0.000  0  0 
       1 32 LYS QG 28 no 100.0 100.0  0.791  0.791 0.000 10  5 no  0.000  0  0 
       1 33 GLY QA 49 no 100.0   0.0  0.000  0.000 0.000  6  2 no  0.011  0  0 
       1 34 GLU QB 68 no 100.0   0.0  0.000  0.000 0.000  2  0 no  0.000  0  0 
       1 34 GLU QG 43 no 100.0   0.0  0.000  0.000 0.000  6  0 no  0.025  0  0 
       1 38 CYS QB 67 no 100.0   0.0  0.000  0.000 0.000  2  0 no  0.000  0  0 
       1 40 VAL QG 42 no 100.0   0.0  0.000  0.000 0.000  6  0 no  0.000  0  0 
       1 41 ASP QB 15 no 100.0 100.0  3.501  3.501 0.000 14  0 no  0.027  0  0 
       1 46 GLU QB 31 no 100.0 100.0  1.062  1.062 0.000  8  0 no  0.000  0  0 
       1 47 LYS QG 66 no 100.0   0.0  0.000  0.000 0.000  2  0 no  0.023  0  0 
       1 48 VAL QG 41 no 100.0   0.0  0.000  0.000 0.000  6  0 no  0.000  0  0 
       1 49 PHE QB  7 no 100.0 100.0  4.501  4.501 0.000 20  3 no  0.009  0  0 
       1 50 LYS QB 40 no 100.0 100.0  1.472  1.472 0.000  6  0 no  0.000  0  0 
       1 50 LYS QD 65 no 100.0   0.0  0.000  0.000 0.000  2  0 no  0.000  0  0 
       1 50 LYS QG 25 no 100.0   0.0  0.000  0.000 0.000 10  0 no  0.074  0  0 
       1 51 GLN QB 12 no 100.0 100.0  1.028  1.028 0.000 15  2 no  0.041  0  0 
       1 51 GLN QE 60 no 100.0   0.0  0.000  0.000 0.000  4  2 no  0.041  0  0 
       1 51 GLN QG 55 no 100.0   0.0  0.000  0.000 0.000  4  0 no  0.018  0  0 
       1 52 TYR QE 24 no  55.0  24.6  1.621  6.602 4.981 11  3 yes 1.892 18 27 
       1 54 ASN QB 54 no 100.0   0.0  0.000  0.000 0.000  4  0 no  0.001  0  0 
       1 54 ASN QD 53 no 100.0   0.0  0.000  0.000 0.000  4  0 no  0.012  0  0 
       1 55 ASP QB 52 no 100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       1 56 ASN QB  9 no 100.0 100.0  2.314  2.314 0.000 16  4 no  0.006  0  0 
       1 56 ASN QD  3 no 100.0  76.3  6.602  8.649 2.048 25  4 yes 2.231  9  9 
       1 58 VAL QG 23 no 100.0   0.0  0.000  0.000 0.000 12  4 no  0.007  0  0 
       1 59 ASP QB 39 no 100.0   0.0  0.000  0.000 0.000  6  0 no  0.000  0  0 
       1 60 GLY QA 19 no 100.0 100.0  7.115  7.115 0.000 13  3 no  0.015  0  0 
       1 61 GLU QB 51 no 100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       1 61 GLU QG 64 no 100.0   0.0  0.000  0.000 0.000  2  0 no  0.002  0  0 
       1 62 TRP QB 38 no 100.0 100.0  1.186  1.186 0.000  6  0 no  0.000  0  0 
       1 64 TYR QB 37 no 100.0  99.6  0.405  0.407 0.002  7  0 no  0.058  0  0 
       1 65 ASP QB 21 no 100.0 100.0  1.154  1.154 0.000 12  0 no  0.012  0  0 
       1 66 ASP QB 29 no 100.0 100.0  0.695  0.695 0.000  9  0 no  0.000  0  0 
       1 69 LYS QD 30 no 100.0   0.0  0.000  0.000 0.000  8  0 no  0.010  0  0 
       1 69 LYS QE 59 no 100.0   0.0  0.000  0.000 0.000  4  2 no  0.000  0  0 
       1 69 LYS QG 63 no 100.0   0.0  0.000  0.000 0.000  2  0 no  0.000  0  0 
       1 71 PHE QB 18 no 100.0 100.0  5.574  5.575 0.001 13  2 no  0.039  0  0 
       1 73 VAL QG  1 no 100.0 100.0 23.486 23.486 0.000 38  4 no  0.015  0  0 
       1 75 GLU QB 34 no 100.0   0.0  0.000  0.000 0.000  8  4 no  0.000  0  0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Tuesday, July 2, 2024 10:46:40 AM GMT (wattos1)