NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
451684 2rpb 11060 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2rpb


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        126
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.037
    _Stereo_assign_list.Total_e_high_states  88.467
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1   4 HIS QB 126 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1   5 VAL QG 106 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1   6 ASP QB 105 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1   7 LEU QD 125 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.054 0 0 
       1   8 ARG QB 124 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1   8 ARG QD 104 no 100.0   0.0  0.000  0.002 0.002  4  0 no 0.189 0 0 
       1   9 GLU QB  34 no 100.0   0.0  0.000  0.001 0.001 10  0 no 0.068 0 0 
       1  10 HIS QB 103 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  11 VAL QG  21 no 100.0   0.0  0.000  0.000 0.000 12  0 no 0.048 0 0 
       1  12 ILE QG  31 no 100.0 100.0  0.500  0.500 0.000 11  0 no 0.000 0 0 
       1  13 ASP QB  51 no   0.0   0.0  0.000  0.009 0.009  8  0 no 0.166 0 0 
       1  14 VAL QG  54 no 100.0   0.0  0.000  0.000 0.000  8  4 no 0.006 0 0 
       1  15 PRO QB  43 no 100.0   0.0  0.000  0.001 0.001 10  8 no 0.051 0 0 
       1  15 PRO QD  29 no 100.0   0.0  0.000  0.000 0.000 12  8 no 0.000 0 0 
       1  16 PRO QB 102 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  16 PRO QD  46 no 100.0 100.0  1.881  1.881 0.000  9  6 no 0.001 0 0 
       1  17 GLN QB  71 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.038 0 0 
       1  17 GLN QG 101 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  18 GLU QB 123 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  18 GLU QG  66 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1  19 VAL QG 100 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.017 0 0 
       1  20 ILE QG  99 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  21 CYS QB   2 no 100.0  99.8  2.810  2.816 0.006 28  4 no 0.086 0 0 
       1  22 LYS QB   7 no 100.0 100.0  2.660  2.660 0.000 22  7 no 0.021 0 0 
       1  22 LYS QD  70 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.000 0 0 
       1  22 LYS QG  56 no 100.0 100.0  1.380  1.380 0.000  7  0 no 0.000 0 0 
       1  23 ASP QB  98 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  24 ASN QB  97 no 100.0   0.0  0.000  0.002 0.002  4  0 no 0.099 0 0 
       1  24 ASN QD 122 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  25 VAL QG 108 no 100.0   0.0  0.000  0.000 0.000  4  2 no 0.000 0 0 
       1  26 VAL QG 121 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  27 VAL QG   9 no 100.0 100.0 19.557 19.557 0.000 21  7 no 0.015 0 0 
       1  30 ASP QB  69 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.006 0 0 
       1  32 VAL QG   5 no 100.0 100.0  3.739  3.739 0.000 26  6 no 0.027 0 0 
       1  33 VAL QG  23 no 100.0 100.0  6.458  6.458 0.000 12  2 no 0.017 0 0 
       1  34 TYR QB   3 no 100.0 100.0  2.200  2.200 0.000 28  7 no 0.045 0 0 
       1  35 TYR QB  16 no 100.0 100.0  1.363  1.363 0.000 15  0 no 0.004 0 0 
       1  36 GLN QE  12 no 100.0 100.0  1.078  1.079 0.000 17  0 no 0.028 0 0 
       1  36 GLN QG  65 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.045 0 0 
       1  37 VAL QG  96 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  38 ILE QG  25 no 100.0   0.0  0.000  0.002 0.002 12  4 no 0.203 0 0 
       1  39 ASP QB  11 no 100.0   0.0  0.000  0.000 0.000 18 12 no 0.011 0 0 
       1  40 PRO QB  64 no 100.0 100.0  0.407  0.407 0.000  6  0 no 0.002 0 0 
       1  40 PRO QD  41 no 100.0 100.0  0.085  0.085 0.000 10  4 no 0.000 0 0 
       1  40 PRO QG  95 no 100.0 100.0  1.334  1.334 0.000  4  0 no 0.018 0 0 
       1  41 VAL QG  94 no 100.0   0.0  0.000  0.005 0.005  4  0 no 0.126 0 0 
       1  42 LYS QB  73 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.005 0 0 
       1  42 LYS QG  93 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  44 VAL QG  92 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.032 0 0 
       1  47 VAL QG  63 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.012 0 0 
       1  50 PHE QB   8 no 100.0 100.0  1.062  1.062 0.000 21  0 no 0.030 0 0 
       1  51 LEU QB  14 no 100.0 100.0  0.694  0.694 0.000 16  6 no 0.009 0 0 
       1  51 LEU QD  24 no 100.0   0.0  0.000  0.000 0.000 12  4 no 0.000 0 0 
       1  52 MET QB 107 no 100.0 100.0  0.540  0.540 0.000  4  1 no 0.005 0 0 
       1  52 MET QG  17 no 100.0 100.0  2.152  2.152 0.000 15  1 no 0.025 0 0 
       1  54 ILE QG  91 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.021 0 0 
       1  55 VAL QG  90 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.008 0 0 
       1  56 LYS QG 120 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  57 LEU QB  62 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.024 0 0 
       1  57 LEU QD  89 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  59 GLN QB  37 no 100.0 100.0  1.250  1.250 0.000 10  1 no 0.019 0 0 
       1  59 GLN QE  20 no   5.0   0.0  0.000  0.001 0.001 14  8 no 0.104 0 0 
       1  59 GLN QG  68 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.020 0 0 
       1  61 ASN QB   1 no 100.0 100.0  3.614  3.614 0.000 33  8 no 0.027 0 0 
       1  61 ASN QD  33 no 100.0 100.0  1.005  1.005 0.000 10  0 no 0.001 0 0 
       1  62 LEU QB  13 no 100.0 100.0  1.795  1.795 0.000 17  8 no 0.020 0 0 
       1  62 LEU QD   6 no 100.0 100.0 12.243 12.243 0.000 25  9 no 0.000 0 0 
       1  63 ARG QD  88 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  63 ARG QG 119 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  65 ILE QG  61 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.009 0 0 
       1  66 ILE QG 118 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  67 GLY QA  87 no 100.0 100.0  1.501  1.501 0.000  4  0 no 0.039 0 0 
       1  68 GLU QB  40 no 100.0  99.9  0.511  0.512 0.000 10  4 no 0.026 0 0 
       1  68 GLU QG  36 no 100.0 100.0  0.999  0.999 0.000 10  1 no 0.015 0 0 
       1  69 MET QB  50 no 100.0 100.0  1.334  1.334 0.000  8  0 no 0.032 0 0 
       1  69 MET QG  86 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.003 0 0 
       1  70 GLU QG  72 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.021 0 0 
       1  71 LEU QB  45 no 100.0 100.0  1.655  1.655 0.000  9  5 no 0.000 0 0 
       1  71 LEU QD  19 no 100.0   0.0  0.000  0.000 0.000 14  8 no 0.000 0 0 
       1  73 GLU QB 117 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  73 GLU QG  85 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.008 0 0 
       1  75 LEU QB 111 no 100.0   0.0  0.000  0.000 0.000  4  4 no 0.000 0 0 
       1  75 LEU QD 110 no 100.0   0.0  0.000  0.000 0.000  4  4 no 0.000 0 0 
       1  77 GLY QA  32 no 100.0 100.0  1.954  1.954 0.000 11  1 no 0.025 0 0 
       1  78 ARG QB 116 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  80 ILE QG  84 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.019 0 0 
       1  81 ILE QG  35 no 100.0 100.0  2.251  2.251 0.000 10  1 no 0.025 0 0 
       1  82 ASN QB  39 no 100.0   0.0  0.000  0.000 0.000 10  4 no 0.041 0 0 
       1  84 ARG QD  83 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  85 LEU QB  15 no 100.0   0.0  0.000  0.000 0.000 16  8 no 0.019 0 0 
       1  85 LEU QD  28 no 100.0   0.0  0.000  0.000 0.000 12  8 no 0.014 0 0 
       1  86 ARG QD  49 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.033 0 0 
       1  86 ARG QG  82 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  88 GLU QB  53 no 100.0   0.0  0.000  0.000 0.000  8  4 no 0.000 0 0 
       1  88 GLU QG  60 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.008 0 0 
       1  89 LEU QB  44 no 100.0 100.0  1.627  1.627 0.000  9  1 no 0.000 0 0 
       1  89 LEU QD  48 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.021 0 0 
       1  90 ASP QB  10 no 100.0 100.0  1.232  1.232 0.000 20  2 no 0.017 0 0 
       1  91 LYS QG  81 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.015 0 0 
       1  92 ILE QG  80 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.051 0 0 
       1  94 ASP QB  59 no 100.0   0.0  0.000  0.001 0.001  6  0 no 0.072 0 0 
       1  95 ARG QB  79 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.014 0 0 
       1  95 ARG QG  78 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  96 TRP QB   4 no 100.0 100.0  2.728  2.728 0.000 27  2 no 0.019 0 0 
       1  97 GLY QA  27 no 100.0   0.0  0.000  0.000 0.000 12  8 no 0.016 0 0 
       1  98 VAL QG  22 no 100.0   0.0  0.000  0.000 0.000 12  2 no 0.019 0 0 
       1  99 LYS QB  77 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  99 LYS QD  76 no 100.0   0.0  0.000  0.001 0.001  4  0 no 0.075 0 0 
       1  99 LYS QG 115 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 100 ILE QG  67 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.000 0 0 
       1 102 ARG QB  42 no 100.0   0.0  0.000  0.000 0.000 10  6 no 0.062 0 0 
       1 102 ARG QD  52 no 100.0   0.0  0.000  0.000 0.000  8  4 no 0.018 0 0 
       1 102 ARG QG  18 no 100.0 100.0  1.207  1.207 0.000 14  4 no 0.000 0 0 
       1 103 VAL QG  26 no 100.0   0.0  0.000  0.000 0.000 12  8 no 0.000 0 0 
       1 104 GLU QB 114 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.016 0 0 
       1 106 GLN QB  75 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.005 0 0 
       1 106 GLN QE 109 no 100.0   0.0  0.000  0.000 0.000  4  4 no 0.000 0 0 
       1 106 GLN QG  38 no 100.0   0.0  0.000  0.000 0.000 10  2 no 0.000 0 0 
       1 107 ARG QD  74 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.014 0 0 
       1 108 ILE QG  58 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1 109 ASP QB  47 no 100.0   0.0  0.000  0.002 0.002  8  0 no 0.121 0 0 
       1 110 PRO QB  55 no 100.0   0.0  0.000  0.000 0.000  8  6 no 0.011 0 0 
       1 110 PRO QD  57 no 100.0 100.0  1.625  1.626 0.001  6  0 no 0.057 0 0 
       1 111 PRO QB 113 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 111 PRO QD  30 no 100.0   0.0  0.000  0.000 0.000 12 10 no 0.000 0 0 
       1 112 LYS QB 112 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Tuesday, July 2, 2024 10:50:08 AM GMT (wattos1)