NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
416354 2dj1 11101 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2dj1


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        141
    _Stereo_assign_list.Swap_count           0
    _Stereo_assign_list.Swap_percentage      0.0
    _Stereo_assign_list.Deassign_count       0
    _Stereo_assign_list.Deassign_percentage  0.0
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   0.021
    _Stereo_assign_list.Total_e_high_states  481.507
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1  10 ASP QB 118 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  11 LEU QB 139 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.013 0 0 
       1  11 LEU QD 117 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.009 0 0 
       1  12 GLU QG  87 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.009 0 0 
       1  13 VAL QG   6 no 100.0 100.0 31.159 31.159 0.000 41 12 no 0.007 0 0 
       1  14 LYS QB 116 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  15 GLU QB  40 no 100.0 100.0  3.887  3.887 0.000 13  1 no 0.031 0 0 
       1  16 GLU QB 138 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.010 0 0 
       1  16 GLU QG  94 no 100.0   0.0  0.000  0.003 0.003  6  2 no 0.232 0 0 
       1  17 ASN QB 123 no 100.0   0.0  0.000  0.000 0.000  4  2 no 0.000 0 0 
       1  17 ASN QD 115 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.024 0 0 
       1  18 GLY QA  65 no 100.0 100.0  2.090  2.090 0.000  9  2 no 0.005 0 0 
       1  19 VAL QG   3 no 100.0 100.0 43.748 43.749 0.000 46 14 no 0.036 0 0 
       1  21 VAL QG  11 no 100.0 100.0 16.290 16.290 0.000 29  6 no 0.042 0 0 
       1  22 LEU QB  18 no 100.0 100.0  2.637  2.637 0.000 21  9 no 0.000 0 0 
       1  22 LEU QD   4 no 100.0 100.0 24.008 24.008 0.000 46 15 no 0.013 0 0 
       1  23 ASN QB  70 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.000 0 0 
       1  23 ASN QD  30 no 100.0 100.0  2.213  2.213 0.000 15  5 no 0.020 0 0 
       1  26 ASN QB 122 no 100.0   0.0  0.000  0.000 0.000  4  2 no 0.000 0 0 
       1  26 ASN QD  19 no 100.0 100.0  1.265  1.265 0.000 21 10 no 0.004 0 0 
       1  27 PHE QB  28 no 100.0 100.0  1.948  1.948 0.000 16  5 no 0.000 0 0 
       1  29 ASN QD 114 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  30 PHE QB  32 no 100.0 100.0  1.399  1.399 0.000 15  8 no 0.000 0 0 
       1  31 VAL QG   9 no 100.0 100.0 15.964 15.964 0.000 39 10 no 0.028 0 0 
       1  33 ASP QB 113 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.014 0 0 
       1  34 LYS QD 137 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  34 LYS QE  86 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.003 0 0 
       1  34 LYS QG  85 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.013 0 0 
       1  37 VAL QG  57 no 100.0   0.0  0.000  0.000 0.000 10  2 no 0.000 0 0 
       1  38 LEU QB  31 no 100.0 100.0  0.746  0.746 0.000 15  7 no 0.000 0 0 
       1  38 LEU QD  14 no 100.0 100.0 21.109 21.109 0.000 28  8 no 0.008 0 0 
       1  39 LEU QB  42 no 100.0 100.0  1.270  1.270 0.000 13  4 no 0.000 0 0 
       1  39 LEU QD  12 no 100.0 100.0 22.723 22.723 0.000 29  9 no 0.005 0 0 
       1  40 GLU QB  43 no 100.0 100.0  1.609  1.609 0.000 12  0 no 0.039 0 0 
       1  40 GLU QG 136 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  41 PHE QB  38 no 100.0   0.0  0.000  0.000 0.000 14  4 no 0.002 0 0 
       1  42 TYR QB  98 no 100.0 100.0  2.533  2.533 0.000  5  0 no 0.010 0 0 
       1  44 PRO QB  84 no 100.0 100.0  1.744  1.744 0.000  6  0 no 0.000 0 0 
       1  44 PRO QD  56 no 100.0   0.0  0.000  0.000 0.000 10  0 no 0.000 0 0 
       1  44 PRO QG  35 no 100.0 100.0  1.714  1.714 0.000 14  0 no 0.012 0 0 
       1  45 TRP QB 135 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  46 CYS QB  34 no 100.0 100.0  2.305  2.305 0.000 14  0 no 0.003 0 0 
       1  47 GLY QA  97 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.019 0 0 
       1  48 HIS QB 112 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  49 CYS QB  83 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.005 0 0 
       1  50 LYS QD  47 no 100.0   0.0  0.000  0.000 0.000 12  4 no 0.058 0 0 
       1  50 LYS QG 111 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.045 0 0 
       1  51 GLN QG 110 no 100.0   0.0  0.000  0.001 0.001  4  0 no 0.125 0 0 
       1  52 PHE QB  82 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1  54 PRO QD  55 no 100.0 100.0  1.545  1.545 0.000 10  0 no 0.007 0 0 
       1  55 GLU QB  69 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.005 0 0 
       1  56 TYR QB  25 no 100.0 100.0  3.923  3.923 0.000 17  2 no 0.010 0 0 
       1  57 GLU QB  93 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.000 0 0 
       1  58 LYS QB  41 no 100.0 100.0  0.534  0.534 0.000 13  2 no 0.000 0 0 
       1  58 LYS QD 134 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.013 0 0 
       1  58 LYS QE 141 no 100.0   0.0  0.000  0.000 0.000  2  2 no 0.000 0 0 
       1  58 LYS QG 109 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1  59 ILE QG  72 no 100.0   0.0  0.000  0.000 0.000  8  4 no 0.000 0 0 
       1  61 SER QB  81 no 100.0   0.0  0.000  0.003 0.003  6  0 no 0.104 0 0 
       1  63 LEU QD  15 no 100.0 100.0 23.587 23.587 0.000 27  7 no 0.008 0 0 
       1  64 LYS QB  80 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1  65 ASP QB 133 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  66 ASN QB  27 no 100.0  99.8  1.880  1.885 0.004 16  4 no 0.194 0 0 
       1  66 ASN QD  49 no 100.0   0.0  0.000  0.004 0.004 12  8 no 0.194 0 0 
       1  68 PRO QB  96 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.035 0 0 
       1  68 PRO QD  75 no 100.0 100.0  1.667  1.668 0.000  7  5 no 0.018 0 0 
       1  68 PRO QG 132 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  69 PRO QD  63 no 100.0  99.8  0.315  0.315 0.000 10  4 no 0.065 0 0 
       1  69 PRO QG 131 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  70 ILE QG  37 no 100.0 100.0  2.448  2.448 0.000 14  3 no 0.008 0 0 
       1  72 VAL QG   8 no 100.0 100.0 20.315 20.315 0.000 39  7 no 0.007 0 0 
       1  74 LYS QB  51 no 100.0 100.0  1.203  1.203 0.000 11  1 no 0.005 0 0 
       1  74 LYS QE 125 no 100.0   0.0  0.000  0.000 0.000  4  4 no 0.000 0 0 
       1  74 LYS QG  46 no 100.0   0.0  0.000  0.000 0.000 12  4 no 0.054 0 0 
       1  75 ILE QG  26 no 100.0 100.0  1.332  1.332 0.000 17  4 no 0.000 0 0 
       1  76 ASP QB  79 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.015 0 0 
       1  79 SER QB 108 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.052 0 0 
       1  82 MET QB  78 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.042 0 0 
       1  82 MET QG  68 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.000 0 0 
       1  83 LEU QB  17 no 100.0 100.0  1.729  1.729 0.000 21  5 no 0.026 0 0 
       1  83 LEU QD   2 no 100.0 100.0 23.622 23.622 0.000 49 12 no 0.008 0 0 
       1  86 LYS QB  16 no 100.0 100.0  2.234  2.234 0.000 26 10 no 0.000 0 0 
       1  86 LYS QD  24 no 100.0   0.0  0.000  0.000 0.000 18  6 no 0.004 0 0 
       1  86 LYS QE  48 no 100.0   0.0  0.000  0.000 0.000 12  6 no 0.002 0 0 
       1  86 LYS QG  62 no 100.0   0.0  0.000  0.000 0.000 10  4 no 0.000 0 0 
       1  87 PHE QB  23 no 100.0 100.0  2.718  2.718 0.000 18  6 no 0.005 0 0 
       1  88 ASP QB 107 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.014 0 0 
       1  89 VAL QG   5 no 100.0 100.0 30.523 30.523 0.000 43  8 no 0.005 0 0 
       1  90 SER QB 130 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  91 GLY QA 129 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  92 TYR QB  67 no 100.0 100.0  0.428  0.428 0.000  8  0 no 0.000 0 0 
       1  93 PRO QB 128 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1  95 ILE QG  54 no 100.0   0.0  0.000  0.000 0.000 10  0 no 0.000 0 0 
       1  96 LYS QB  59 no 100.0 100.0  3.246  3.246 0.000 10  3 no 0.003 0 0 
       1  96 LYS QD 106 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.019 0 0 
       1  96 LYS QE  73 no 100.0   0.0  0.000  0.000 0.000  8  6 no 0.005 0 0 
       1  96 LYS QG  20 no 100.0 100.0  1.298  1.298 0.000 20  4 no 0.009 0 0 
       1  97 ILE QG  58 no 100.0 100.0  0.390  0.390 0.000 10  3 no 0.000 0 0 
       1  98 LEU QB  22 no 100.0   0.0  0.000  0.000 0.000 18  6 no 0.000 0 0 
       1  98 LEU QD   7 no 100.0 100.0 31.237 31.237 0.000 40 13 no 0.023 0 0 
       1  99 LYS QB  92 no 100.0   0.0  0.000  0.001 0.001  6  2 no 0.093 0 0 
       1  99 LYS QD  91 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.050 0 0 
       1  99 LYS QE 121 no 100.0   0.0  0.000  0.000 0.000  4  2 no 0.016 0 0 
       1  99 LYS QG 120 no 100.0   0.0  0.000  0.000 0.000  4  2 no 0.000 0 0 
       1 100 LYS QB  74 no 100.0 100.0  0.943  0.943 0.000  7  0 no 0.041 0 0 
       1 101 GLY QA  95 no 100.0   0.0  0.000  0.000 0.000  6  4 no 0.012 0 0 
       1 102 GLN QB 105 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.075 0 0 
       1 102 GLN QG  77 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.053 0 0 
       1 104 VAL QG  10 no 100.0 100.0 20.135 20.135 0.000 31  6 no 0.002 0 0 
       1 105 ASP QB  90 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.004 0 0 
       1 106 TYR QB  50 no 100.0 100.0  0.703  0.703 0.000 11  1 no 0.003 0 0 
       1 108 GLY QA 104 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.002 0 0 
       1 110 ARG QD  66 no 100.0   0.0  0.000  0.000 0.000  8  0 no 0.005 0 0 
       1 110 ARG QG 103 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.067 0 0 
       1 112 GLN QB 127 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.000 0 0 
       1 112 GLN QG  61 no 100.0   0.0  0.000  0.000 0.000 10  4 no 0.000 0 0 
       1 113 GLU QB 126 no 100.0   0.0  0.000  0.000 0.000  2  0 no 0.029 0 0 
       1 113 GLU QG 102 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.005 0 0 
       1 114 GLU QB  33 no 100.0 100.0  1.426  1.426 0.000 14  0 no 0.007 0 0 
       1 114 GLU QG 101 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 115 ILE QG  53 no 100.0   0.0  0.000  0.000 0.000 10  0 no 0.000 0 0 
       1 116 VAL QG  13 no 100.0 100.0 17.470 17.470 0.000 28  1 no 0.054 0 0 
       1 118 LYS QB  76 no 100.0   0.0  0.000  0.000 0.000  6  0 no 0.000 0 0 
       1 118 LYS QD  89 no 100.0   0.0  0.000  0.001 0.001  6  2 no 0.094 0 0 
       1 118 LYS QE 119 no 100.0   0.0  0.000  0.000 0.000  4  2 no 0.000 0 0 
       1 118 LYS QG  44 no 100.0   0.0  0.000  0.000 0.000 12  2 no 0.029 0 0 
       1 119 VAL QG  39 no 100.0 100.0 10.220 10.220 0.000 14  6 no 0.003 0 0 
       1 120 ARG QD 100 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 121 GLU QB  88 no 100.0   0.0  0.000  0.000 0.000  6  2 no 0.014 0 0 
       1 121 GLU QG  36 no 100.0   0.0  0.000  0.000 0.000 14  2 no 0.030 0 0 
       1 122 VAL QG   1 no 100.0 100.0 63.997 63.998 0.001 63 23 no 0.085 0 0 
       1 124 GLN QB  29 no 100.0 100.0  1.622  1.622 0.000 15  5 no 0.000 0 0 
       1 124 GLN QE  21 no 100.0 100.0  1.280  1.280 0.000 19  8 no 0.004 0 0 
       1 124 GLN QG  45 no 100.0 100.0  2.261  2.261 0.000 12  4 no 0.000 0 0 
       1 125 PRO QD  60 no 100.0 100.0  1.843  1.843 0.000 10  4 no 0.000 0 0 
       1 126 ASP QB  99 no 100.0   0.0  0.000  0.000 0.000  4  0 no 0.000 0 0 
       1 129 PRO QB 140 no 100.0   0.0  0.000  0.000 0.000  2  2 no 0.000 0 0 
       1 129 PRO QD  52 no 100.0   0.0  0.000  0.000 0.000 10  0 no 0.000 0 0 
       1 130 PRO QB 124 no 100.0   0.0  0.000  0.000 0.000  4  4 no 0.000 0 0 
       1 130 PRO QD  64 no 100.0 100.0  1.051  1.051 0.000  9  2 no 0.000 0 0 
       1 131 PRO QD  71 no 100.0   0.0  0.000  0.000 0.000  8  4 no 0.000 0 0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Thursday, May 23, 2024 11:27:54 PM GMT (wattos1)