NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
403624 1wlx 6013 cing 4-filtered-FRED Wattos check stereo assignment distance


data_1wlx


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        126
    _Stereo_assign_list.Swap_count           16
    _Stereo_assign_list.Swap_percentage      12.7
    _Stereo_assign_list.Deassign_count       27
    _Stereo_assign_list.Deassign_percentage  21.4
    _Stereo_assign_list.Model_count          20
    _Stereo_assign_list.Total_e_low_states   49.314
    _Stereo_assign_list.Total_e_high_states  149.090
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1   4 GLU QG 104 no  100.0   0.0  0.000  0.012 0.012  4 0 no  0.283  0  0 
       1   5 LYS QG 114 no   45.0  43.8  0.089  0.204 0.115  3 0 yes 1.080  1  2 
       1   6 GLN QB 113 no   40.0  86.1  0.046  0.053 0.007  3 0 no  0.271  0  0 
       1   6 GLN QE 107 no  100.0   0.0  0.000  0.000 0.000  4 4 no  0.000  0  0 
       1   6 GLN QG  45 no   50.0  34.6  0.033  0.096 0.063  8 4 no  0.564  0  2 
       1   7 LEU QB 103 no   65.0  14.2  0.015  0.108 0.093  4 0 no  0.387  0  0 
       1   7 LEU QD 102 no   60.0  60.3  0.217  0.360 0.143  4 0 yes 0.970  0 10 
       1   8 GLU QB 101 no   60.0   7.4  0.005  0.065 0.061  4 0 no  0.527  0  2 
       1  10 ILE QG  71 yes 100.0  70.6  6.698  9.482 2.784  5 0 yes 1.774 20 20 
       1  12 GLN QB  44 no   95.0  25.9  0.058  0.226 0.167  8 4 no  0.356  0  0 
       1  12 GLN QE  25 no   70.0  42.8  0.190  0.443 0.253 11 8 yes 1.030  1  4 
       1  12 GLN QG  52 no   55.0  12.3  0.008  0.064 0.056  7 4 no  0.499  0  0 
       1  13 LEU QD  22 yes  85.0  83.0  2.632  3.172 0.540 11 0 yes 1.487  4  9 
       1  14 HIS QB  20 no   90.0  64.2  0.024  0.037 0.013 12 0 no  0.366  0  0 
       1  15 LEU QB  62 yes  80.0  88.6  0.496  0.560 0.064  6 0 no  0.508  0  1 
       1  16 GLU QB  61 no  100.0  85.5  0.096  0.112 0.016  6 0 no  0.186  0  0 
       1  17 TYR QB   8 yes 100.0  60.0  0.518  0.864 0.345 15 0 no  0.515  0  3 
       1  19 LYS QB 100 no  100.0  98.0  0.036  0.036 0.001  4 0 no  0.077  0  0 
       1  20 ARG QB  99 no  100.0   0.0  0.000  0.000 0.000  4 0 no  0.000  0  0 
       1  20 ARG QG 112 no   75.0  83.1  0.059  0.071 0.012  3 0 no  0.256  0  0 
       1  23 PRO QB 126 no  100.0 100.0  0.007  0.007 0.000  2 0 no  0.000  0  0 
       1  23 PRO QD  60 no   35.0  87.6  0.021  0.024 0.003  6 0 no  0.119  0  0 
       1  23 PRO QG  98 no  100.0  90.7  0.100  0.110 0.010  4 0 no  0.417  0  0 
       1  24 PHE QB  19 no   95.0  28.9  0.043  0.149 0.106 12 0 no  0.397  0  0 
       1  25 ASN QB  32 no   95.0  59.6  0.041  0.069 0.028 10 4 no  0.418  0  0 
       1  25 ASN QD  31 no  100.0  50.7  0.502  0.990 0.488 10 4 yes 0.787  0 19 
       1  26 ASN QB  30 no  100.0  65.4  0.217  0.332 0.115 10 4 no  0.377  0  0 
       1  26 ASN QD  24 no  100.0  93.4  0.254  0.272 0.018 11 4 no  0.173  0  0 
       1  27 TRP QB  18 yes 100.0  39.0  0.566  1.451 0.885 12 0 yes 0.754  0 31 
       1  28 MET QB 125 no  100.0   0.0  0.000  0.000 0.000  2 0 no  0.000  0  0 
       1  28 MET QG  38 no   80.0  77.2  1.006  1.303 0.298  8 0 yes 1.784  2  5 
       1  29 GLU QB  97 no   85.0  61.5  0.038  0.062 0.024  4 0 no  0.556  0  1 
       1  32 MET QB 111 no  100.0   0.0  0.000  0.000 0.000  3 0 no  0.000  0  0 
       1  33 GLU QB  96 no   50.0  26.8  0.077  0.288 0.210  4 0 no  0.714  0  8 
       1  34 ASP QB  59 no   25.0  89.0  0.010  0.011 0.001  6 0 no  0.110  0  0 
       1  35 LEU QB  95 no  100.0   0.0  0.000  0.000 0.000  4 0 no  0.000  0  0 
       1  35 LEU QD   5 no  100.0  99.4 10.339 10.399 0.060 19 2 no  0.373  0  0 
       1  36 GLN QB  43 no   75.0  33.5  0.144  0.430 0.286  8 4 no  0.802  0  6 
       1  36 GLN QE  11 no  100.0  38.9  0.200  0.513 0.314 14 4 no  0.802  0  6 
       1  37 ASP QB  58 no   90.0  41.4  0.003  0.006 0.004  6 0 no  0.200  0  0 
       1  39 PHE QB  14 no   55.0   4.4  0.064  1.471 1.407 13 5 yes 0.909  0 35 
       1  40 ILE QG  57 no   90.0  12.6  0.020  0.161 0.141  6 0 yes 1.048  1  1 
       1  42 HIS QB  37 yes  95.0  87.7  0.308  0.351 0.043  8 0 no  0.646  0  1 
       1  44 ILE QG  74 no   45.0  44.9  0.125  0.278 0.153  5 1 no  0.981  0  3 
       1  45 GLU QB 124 no   95.0  75.7  0.084  0.111 0.027  2 0 no  0.254  0  0 
       1  45 GLU QG 123 no   35.0  26.8  0.006  0.023 0.017  2 0 no  0.315  0  0 
       1  46 GLU QB 122 no   95.0  92.3  0.036  0.039 0.003  2 0 no  0.246  0  0 
       1  46 GLU QG  94 no   85.0  91.9  0.133  0.145 0.012  4 0 no  0.225  0  0 
       1  48 GLU QB  93 no   70.0  27.6  0.011  0.042 0.030  4 0 no  0.283  0  0 
       1  48 GLU QG 110 no   15.0  51.4  0.018  0.035 0.017  3 0 no  0.234  0  0 
       1  50 LEU QB  42 no   95.0  68.3  0.043  0.062 0.020  8 4 no  0.091  0  0 
       1  50 LEU QD   2 no   85.0  79.9 12.106 15.143 3.038 27 7 yes 2.672 18 48 
       1  54 HIS QB  29 no  100.0  81.0  0.003  0.004 0.001 10 2 no  0.198  0  0 
       1  55 ASP QB  56 no  100.0 100.0  0.018  0.018 0.000  6 0 no  0.204  0  0 
       1  56 GLN QE 106 no  100.0   0.0  0.000  0.000 0.000  4 4 no  0.000  0  0 
       1  56 GLN QG  51 no   35.0  43.9  0.035  0.081 0.045  7 4 no  0.523  0  1 
       1  57 PHE QB  33 no   65.0  68.8  0.222  0.322 0.101  9 0 yes 1.229  1 11 
       1  58 LYS QB  92 no   20.0  96.0  0.008  0.008 0.000  4 0 no  0.073  0  0 
       1  61 LEU QD   3 no  100.0  65.7  4.413  6.716 2.303 23 4 yes 1.889 18 20 
       1  62 PRO QB 121 no  100.0   0.0  0.000  0.000 0.000  2 0 no  0.000  0  0 
       1  62 PRO QD  91 no  100.0   0.0  0.000  0.000 0.000  4 0 no  0.000  0  0 
       1  63 ASP QB  55 no  100.0 100.0  0.002  0.002 0.000  6 0 no  0.195  0  0 
       1  65 ASP QB  28 no  100.0  91.2  0.578  0.634 0.056 10 0 no  0.284  0  0 
       1  66 ARG QB  90 no   75.0  43.6  0.017  0.039 0.022  4 0 no  0.392  0  0 
       1  67 GLU QB  89 no   60.0 100.0  0.013  0.013 0.000  4 0 no  0.000  0  0 
       1  68 ARG QB  48 no   85.0  87.6  0.051  0.058 0.007  7 1 no  0.429  0  0 
       1  68 ARG QG  88 no  100.0  13.6  0.001  0.004 0.004  4 0 no  0.151  0  0 
       1  69 GLU QB  87 yes  95.0  97.4  0.133  0.137 0.004  4 0 no  0.120  0  0 
       1  72 LEU QB  86 no   40.0 100.0  0.001  0.001 0.000  4 0 no  0.000  0  0 
       1  74 ILE QG 120 no  100.0   0.0  0.000  0.000 0.000  2 0 no  0.000  0  0 
       1  75 HIS QB  13 yes 100.0  51.4  0.179  0.347 0.169 13 0 no  0.465  0  0 
       1  77 GLU QB  85 no   65.0  47.7  0.039  0.081 0.042  4 0 no  0.513  0  2 
       1  79 GLN QB  23 no  100.0  74.9  1.420  1.896 0.475 11 4 yes 1.144  2  6 
       1  79 GLN QE  12 no  100.0  77.1  3.731  4.839 1.108 14 5 yes 1.510  8 22 
       1  80 ARG QB  84 no   80.0  16.6  0.043  0.256 0.214  4 0 no  0.512  0  3 
       1  80 ARG QG  73 no   85.0  59.8  3.407  5.695 2.288  5 1 yes 2.772 13 21 
       1  81 ILE QG  63 yes  95.0  96.1  0.139  0.145 0.006  6 1 no  0.179  0  0 
       1  83 GLU QB  83 no  100.0  46.7  0.160  0.343 0.183  4 0 no  0.640  0  1 
       1  83 GLU QG  72 no   45.0   6.4  0.087  1.347 1.261  5 1 yes 1.068  6 25 
       1  85 ASN QB  50 no   60.0  84.8  0.274  0.323 0.049  7 4 no  0.872  0  1 
       1  85 ASN QD   7 yes 100.0  87.4  0.499  0.571 0.072 16 4 no  0.327  0  0 
       1  86 HIS QB  82 no   95.0  85.5  0.061  0.071 0.010  4 0 no  0.318  0  0 
       1  88 LYS QG  81 yes  75.0  55.7  0.123  0.222 0.098  4 0 no  0.824  0  3 
       1  89 LEU QB 119 no  100.0  99.3  0.030  0.030 0.000  2 0 no  0.463  0  0 
       1  91 GLY QA 118 no  100.0   0.0  0.000  0.000 0.000  2 0 no  0.000  0  0 
       1  93 ASN QB  54 no   60.0  40.7  0.106  0.262 0.155  6 0 no  0.731  0  7 
       1  94 PRO QB  70 no  100.0  73.1  4.922  6.734 1.812  5 0 yes 1.841 13 18 
       1  94 PRO QD  69 no   75.0  35.7  0.272  0.763 0.491  5 0 yes 1.515  5  6 
       1  94 PRO QG  47 no  100.0  97.6  1.716  1.758 0.041  7 0 no  0.437  0  0 
       1  95 TYR QB  17 no  100.0   5.9  0.062  1.060 0.997 12 0 yes 0.824  0 40 
       1  98 VAL QG  27 no  100.0  21.9  1.960  8.946 6.986 10 0 yes 2.374 38 68 
       1 100 PRO QD  26 no  100.0  88.1  0.702  0.797 0.094 10 0 no  0.633  0  3 
       1 101 GLN QB  68 no   80.0  43.0  3.519  8.182 4.663  5 0 yes 3.151 20 21 
       1 101 GLN QE 115 no   20.0 100.0  0.001  0.001 0.000  3 3 no  0.000  0  0 
       1 101 GLN QG  75 no  100.0 100.0  0.000  0.000 0.000  5 3 no  0.000  0  0 
       1 103 ILE QG  39 no   60.0   7.8  0.044  0.560 0.516  8 1 yes 0.779  0 21 
       1 104 ASN QB  34 no   85.0  25.9  0.000  0.000 0.000  9 3 no  0.091  0  0 
       1 104 ASN QD  64 no  100.0  99.5  1.218  1.224 0.006  6 3 no  0.151  0  0 
       1 106 LYS QB  80 no  100.0   0.0  0.000  0.000 0.000  4 0 no  0.000  0  0 
       1 107 TRP QB  16 yes 100.0  18.9  0.109  0.575 0.466 12 0 no  0.446  0  0 
       1 108 GLU QB  79 no  100.0   0.0  0.000  0.013 0.013  4 0 no  0.196  0  0 
       1 108 GLU QG 109 no   75.0  94.3  0.512  0.543 0.031  3 0 no  0.450  0  0 
       1 109 LYS QG 108 no   60.0  34.3  0.067  0.195 0.128  3 0 no  0.747  0  6 
       1 110 VAL QG   4 yes 100.0  62.2  5.324  8.562 3.238 19 2 yes 2.304 20 20 
       1 111 GLN QE   6 no   45.0  12.4  0.006  0.052 0.045 17 8 no  0.324  0  0 
       1 111 GLN QG  21 no   95.0  80.0  0.143  0.179 0.036 12 4 no  0.335  0  0 
       1 112 GLN QB  41 no  100.0  65.2  0.030  0.046 0.016  8 4 no  0.160  0  0 
       1 112 GLN QE  46 no   60.0  98.7  0.056  0.057 0.001  8 8 no  0.119  0  0 
       1 112 GLN QG  49 no  100.0   0.0  0.000  0.007 0.007  7 4 no  0.243  0  0 
       1 113 LEU QB  78 no  100.0 100.0  0.000  0.000 0.000  4 0 no  0.038  0  0 
       1 114 VAL QG   9 no   65.0  42.4  1.411  3.330 1.919 14 0 yes 2.052 24 42 
       1 115 PRO QD 117 no  100.0   0.0  0.000  0.000 0.000  2 0 no  0.000  0  0 
       1 117 ARG QB  67 no  100.0 100.0  0.308  0.308 0.000  5 0 no  0.000  0  0 
       1 118 ASP QB  36 no   80.0  99.1  0.066  0.066 0.001  8 0 no  0.111  0  0 
       1 121 LEU QB  77 yes 100.0 100.0  0.207  0.207 0.000  4 0 no  0.000  0  0 
       1 121 LEU QD   1 no  100.0  84.0 20.695 24.651 3.955 28 4 yes 1.631 31 74 
       1 122 LEU QB  76 no   55.0  55.3  0.006  0.011 0.005  4 0 no  0.175  0  0 
       1 124 GLU QB  35 no  100.0  90.2  0.070  0.078 0.008  8 0 no  0.427  0  0 
       1 125 GLN QE  10 yes  95.0  14.9  0.347  2.323 1.977 14 4 yes 1.337 15 20 
       1 125 GLN QG  40 yes 100.0  73.1  0.470  0.643 0.173  8 4 no  0.368  0  0 
       1 128 GLN QB 105 no   90.0  93.5  0.048  0.051 0.003  4 2 no  0.372  0  0 
       1 128 GLN QE  15 no  100.0  97.1  1.026  1.057 0.031 13 6 no  0.351  0  0 
       1 128 GLN QG  66 no   40.0  23.6  0.010  0.042 0.032  6 4 no  0.395  0  0 
       1 129 GLN QB 116 no   65.0  48.5  0.150  0.310 0.160  2 0 no  0.745  0  5 
       1 129 GLN QE  53 no  100.0  72.9  0.618  0.848 0.230  7 5 no  0.981  0  2 
       1 129 GLN QG  65 no   70.0  71.8  0.146  0.203 0.057  6 4 no  0.509  0  2 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Sunday, April 28, 2024 1:11:49 PM GMT (wattos1)