NMR Restraints Grid |
Result table
image | mrblock_id | pdb_id | cing | stage | program | type | subtype | subsubtype |
385981 | 1lcm | cing | 4-filtered-FRED | Wattos | check | violation | distance |
data_1lcm save_distance_constraint_statistics_1 _Distance_constraint_stats_list.Sf_category distance_constraint_statistics _Distance_constraint_stats_list.Constraint_list_ID 1 _Distance_constraint_stats_list.Constraint_count 10 _Distance_constraint_stats_list.Viol_count 7 _Distance_constraint_stats_list.Viol_total 2.362 _Distance_constraint_stats_list.Viol_max 1.176 _Distance_constraint_stats_list.Viol_rms 0.3594 _Distance_constraint_stats_list.Viol_average_all_restraints 0.2362 _Distance_constraint_stats_list.Viol_average_violations_only 0.3374 _Distance_constraint_stats_list.Cutoff_violation_report 0.500 _Distance_constraint_stats_list.Details ; Description of the tags in this list: * 1 * Administrative tag * 2 * Administrative tag * 3 * Administrative tag * 4 * ID of the restraint list. * 5 * Number of restraints in list. * 6 * Number of violated restraints (each model violation is used). * 7 * Sum of violations in Angstrom. * 8 * Maximum violation of a restraint without averaging in any way. * 9 * Rms of violations over all restraints. * 10 * Average violation over all restraints. * 11 * Average violation over violated restraints. This violation is averaged over only those models in which the restraint is violated. These definitions are from: Doreleijers, et al., J. Mol. Biol. 281, 149-164 (1998). * 12 * Threshold for reporting violations (in Angstrom) in the last columns of the next table. * 13 * This tag Description of the tags in the per residue table below: * 1 * Chain identifier (can be absent if none defined) * 2 * Residue number * 3 * Residue name * 4 * Maximum violation in ensemble of models (without any averaging) * 5 * Model number with the maximum violation * 6 * Number of models with a violation above cutoff * 7 * List of models (1 character per model) with a violation above cutoff. An '*' marks a violation above the cutoff. A '+' indicates the largest violation above the cutoff and a '-' marks the smallest violation over cutoff. For models 5, 15, 25,... a ' ' is replaced by a '.'. For models 10, 20, 30,... a ' ' is replaced by a digit starting at 1. * 8 * Administrative tag * 9 * Administrative tag Description of the tags in the per restraint table below: * 1 * Restraint ID within restraint list. First node, FIRST member, first atom's: * 2 * Chain identifier (can be absent if none defined) * 3 * Residue number * 4 * Residue name * 5 * Name of (pseudo-)atom First node, SECOND member, first atom's: * 6 * Chain identifier (can be absent if none defined) * 7 * Residue number * 8 * Residue name * 9 * Name of (pseudo-)atom FIRST node's: * 10 * Target distance value (Angstrom) * 11 * Lower bound distance (Angstrom) * 12 * Upper bound distance (Angstrom) * 13 * Average distance in ensemble of models * 14 * Minimum distance in ensemble of models * 15 * Maximum distance in ensemble of models * 16 * Maximum violation (without any averaging) * 17 * Model number with the maximum violation * 18 * Number of models with a violation above cutoff * 19 * List of models with a violation above cutoff. See description above. * 20 * Administrative tag * 21 * Administrative tag ; loop_ _Distance_constraint_stats_per_res.Atom_entity_assembly_ID _Distance_constraint_stats_per_res.Atom_comp_index_ID _Distance_constraint_stats_per_res.Atom_comp_ID _Distance_constraint_stats_per_res.Total_violation _Distance_constraint_stats_per_res.Max_violation _Distance_constraint_stats_per_res.Max_violation_model_number _Distance_constraint_stats_per_res.Over_cutoff_viol_count _Distance_constraint_stats_per_res.Over_cutoff_viol_per_model 1 1 DAL 0.000 0.000 . 0 "[ ]" 1 2 LEU 2.126 1.176 1 1 [+] 1 4 ARG 0.236 0.236 1 0 "[ ]" stop_ loop_ _Distance_constraint_stats.Restraint_ID _Distance_constraint_stats.Atom_1_entity_assembly_ID _Distance_constraint_stats.Atom_1_comp_index_ID _Distance_constraint_stats.Atom_1_comp_ID _Distance_constraint_stats.Atom_1_ID _Distance_constraint_stats.Atom_2_entity_assembly_ID _Distance_constraint_stats.Atom_2_comp_index_ID _Distance_constraint_stats.Atom_2_comp_ID _Distance_constraint_stats.Atom_2_ID _Distance_constraint_stats.Node_1_distance_val _Distance_constraint_stats.Node_1_distance_lower_bound_val _Distance_constraint_stats.Node_1_distance_upper_bound_val _Distance_constraint_stats.Distance_average _Distance_constraint_stats.Distance_minimum _Distance_constraint_stats.Distance_maximum _Distance_constraint_stats.Max_violation _Distance_constraint_stats.Max_violation_model_number _Distance_constraint_stats.Over_cutoff_violation_count _Distance_constraint_stats.Over_cutoff_viol_per_model _Distance_constraint_stats.Distance_constraint_stats_ID 1 1 1 DAL HA 1 2 LEU H 4.060 2.560 5.580 3.487 3.487 3.487 . 0 0 "[ ]" 1 2 1 2 LEU H 1 2 LEU QB 3.160 2.870 3.470 2.751 2.751 2.751 0.119 1 0 "[ ]" 1 3 1 2 LEU H 1 2 LEU QD 5.000 4.380 6.920 3.204 3.204 3.204 1.176 1 1 [+] 1 4 1 2 LEU H 1 2 LEU HG 2.410 2.340 2.470 2.241 2.241 2.241 0.099 1 0 "[ ]" 1 5 1 2 LEU HA 1 2 LEU QB 2.710 2.600 2.860 2.282 2.282 2.282 0.318 1 0 "[ ]" 1 6 1 2 LEU HA 1 2 LEU QD 2.730 2.450 3.060 2.176 2.176 2.176 0.274 1 0 "[ ]" 1 7 1 2 LEU HA 1 2 LEU HG 2.780 2.660 2.890 3.030 3.030 3.030 0.140 1 0 "[ ]" 1 8 1 4 ARG H 1 4 ARG HA 3.170 2.630 3.460 2.979 2.979 2.979 . 0 0 "[ ]" 1 9 1 4 ARG H 1 4 ARG QB 3.070 2.750 3.420 2.837 2.837 2.837 . 0 0 "[ ]" 1 10 1 4 ARG HA 1 4 ARG QB 2.570 2.450 2.700 2.214 2.214 2.214 0.236 1 0 "[ ]" 1 stop_ save_
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