Result table
| image | mrblock_id | pdb_id | bmrb_id | cing | stage | program | type | subtype | subsubtype |
|
|
644646 | 6sgo RC | 34423 | cing | 4-filtered-FRED | Wattos | check | completeness | distance |
data_6sgo
save_NOE_Completeness
_NOE_completeness_stats.Sf_category NOE_completeness_statistics
_NOE_completeness_stats.Model_count 20
_NOE_completeness_stats.Residue_count 157
_NOE_completeness_stats.Total_atom_count 2179
_NOE_completeness_stats.Observable_atom_definition ob_standard
_NOE_completeness_stats.Observable_atom_count 764
_NOE_completeness_stats.Use_intra_residue_restraints no
_NOE_completeness_stats.Redundancy_threshold_pct 5.0
_NOE_completeness_stats.Distance_averaging_power 1.00
_NOE_completeness_stats.Completeness_cutoff 4.00
_NOE_completeness_stats.Completeness_cumulative_pct 39.2
_NOE_completeness_stats.Constraint_unexpanded_count 1804
_NOE_completeness_stats.Constraint_count 1804
_NOE_completeness_stats.Constraint_exp_unfiltered_count 1821
_NOE_completeness_stats.Constraint_exceptional_count 0
_NOE_completeness_stats.Constraint_nonobservable_count 105
_NOE_completeness_stats.Constraint_intraresidue_count 419
_NOE_completeness_stats.Constraint_surplus_count 117
_NOE_completeness_stats.Constraint_observed_count 1163
_NOE_completeness_stats.Constraint_expected_count 1731
_NOE_completeness_stats.Constraint_matched_count 678
_NOE_completeness_stats.Constraint_unmatched_count 485
_NOE_completeness_stats.Constraint_exp_nonobs_count 1053
_NOE_completeness_stats.Details
;
A detailed methodology description is available at:
http://nmr.cmbi.ru.nl/~jd/wattos/doc/Wattos/Soup/Constraint/dc_completeness.html
Please note that the contributions in ambiguous restraints are considered
separate 'restraints' for the sets defined below.
The cut off for all statistics except those in the by-shell table is
given below by the above tag: _NOE_completeness_stats.Completeness_cutoff
Description of the tags in this list:
* 1 * Administrative tag
* 2 * Administrative tag
* 3 * Administrative tag
* 4 * Number of models
* 5 * Number of residues
* 6 * Number of atoms
* 7 * Standard set name of observable atom definitions
see: Doreleijers et al., J.Biomol.NMR 14, 123-132 (1999).
* 8 * Observable atom(group)s
* 9 * Include intra residue restraints
* 10 * Surplus threshold for determining redundant restraints
* 11 * Power for averaging the distance over models
* 12 * Up to what distance are NOEs expected
* 13 * Cumulative completeness percentage
* 14 * Number of unexpanded restraints in restraint list.
* 15 * Number of restraints in restraint list. Set U
* 16 * Expected restraints based on criteria in list. Set V
Set V differs from set B only if intra residue restraints are analyzed.
* 17 * Exceptional restraints, i.e. with an unknown atom.Set E
* 18 * Not observable NOEs with e.g. hydroxyl Ser HG. Set O
Even though restraints with these atom types might have been observed they are
excluded from the analysis.
* 19 * Intra-residue restraints if not to be analyzed. Set I
* 20 * Surplus like double restraints. Set S
* 21 * Observed restraints. Set A = U - (E u O u I u S)
* 22 * Expected restraints based on criteria as in A. Set B = V - (I u S)
* 23 * Observed restraints matched to the expected. Set M = A n B
* 24 * Observed restraints that were not expected. Set C = A - M
* 25 * Expected restraints that were not observed. Set D = B - M
* 26 * This tag
Description of the tags in the class table:
* 1 * Class of restraint. Note that 'medium-range' involves (2<=i<=4) contacts.
Possible values are: intraresidue,sequential,medium-range,long-range, and intermolecular.
* 2 * Observed restraints. Set A = U - (E u O u I u S)
* 3 * Expected restraints based on criteria as in A. Set B = V - (I u S)
* 4 * Observed restraints matched to the expected. Set M = A n B
* 5 * Completeness percentage
* 6 * Standard deviation from the average over the classes.
* 7 * Extra information
* 8 * Administrative tag
* 9 * Administrative tag
Description of the tags in the shell table.
The first row shows the lower limit of the shells requested and
The last row shows the total number of restraints over the shells.
* 1 * Description of the content of the row: edges, shell, or sums.
The value determines the meaning of the values to the nine 'Matched_shell_x' tags among others.
* 2 * Lower limit of shell of expected restraints.
* 3 * Upper limit of shell of expected restraints.
* 4 * Expected restraints based on criteria as in A. Set B = V - (I u S)
* 5 * Observed restraints matched to the expected. Set M = A n B
* 6 * Matched restraints with experimental distance in shell 1
* 7 * Matched restraints with experimental distance in shell 2
* 8 * Matched restraints with experimental distance in shell 3
* 9 * Matched restraints with experimental distance in shell 4
* 10 * Matched restraints with experimental distance in shell 5
* 11 * Matched restraints with experimental distance in shell 6
* 12 * Matched restraints with experimental distance in shell 7
* 13 * Matched restraints with experimental distance in shell 8
* 14 * Matched restraints with experimental distance in shell 9
* 15 * Matched restraints overflowing the last shell
* 16 * Completeness percentage for this shell
* 17 * Completeness percentage up to upper limit of this shell
* 18 * Administrative tag
* 19 * Administrative tag
Description of the tags in the residue table:
* 1 * Chain identifier
* 2 * Residue number
* 3 * Residue name
* 4 * Observable atom(group)s for this residue.
* 5 * Observed restraints. Set A = U - (E u O u I u S)
* 6 * Expected restraints based on criteria as in A. Set B = V - (I u S)
* 7 * Observed restraints matched to the expected. Set M = A n B
* 8 * Completeness percentage
* 9 * Standard deviation from the average over the residues.
* 10 * Extra information
* 11 * Administrative tag
* 12 * Administrative tag
;
loop_
_NOE_completeness_class.Type
_NOE_completeness_class.Constraint_observed_count
_NOE_completeness_class.Constraint_expected_count
_NOE_completeness_class.Constraint_matched_count
_NOE_completeness_class.Completeness_cumulative_pct
_NOE_completeness_class.Std_dev
_NOE_completeness_class.Details
intraresidue 0 0 0 . . "no intras"
sequential 487 568 291 51.2 0.9 .
medium-range 318 406 160 39.4 -0.1 .
long-range 358 757 227 30.0 -0.9 .
intermolecular 0 0 0 . . "no multimer"
stop_
loop_
_NOE_completeness_shell.Type
_NOE_completeness_shell.Shell_start
_NOE_completeness_shell.Shell_end
_NOE_completeness_shell.Constraint_expected_count
_NOE_completeness_shell.Constraint_matched_count
_NOE_completeness_shell.Matched_shell_1
_NOE_completeness_shell.Matched_shell_2
_NOE_completeness_shell.Matched_shell_3
_NOE_completeness_shell.Matched_shell_4
_NOE_completeness_shell.Matched_shell_5
_NOE_completeness_shell.Matched_shell_6
_NOE_completeness_shell.Matched_shell_7
_NOE_completeness_shell.Matched_shell_8
_NOE_completeness_shell.Matched_shell_9
_NOE_completeness_shell.Matched_shell_overflow
_NOE_completeness_shell.Completeness_shell_pct
_NOE_completeness_shell.Completeness_cumulative_pct
edges . . . . 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 . . . .
shell 0.00 2.00 11 9 0 0 1 3 4 1 0 0 . 0 81.8 81.8
shell 2.00 2.50 209 129 0 22 46 36 18 6 1 0 . 0 61.7 62.7
shell 2.50 3.00 295 161 0 1 53 57 35 13 0 0 . 2 54.6 58.1
shell 3.00 3.50 456 158 0 0 20 61 43 28 4 0 . 2 34.6 47.1
shell 3.50 4.00 760 221 0 0 3 51 103 48 5 8 . 3 29.1 39.2
shell 4.00 4.50 1274 241 0 0 0 8 98 113 16 3 . 3 18.9 30.6
shell 4.50 5.00 1713 161 0 0 0 1 12 84 46 16 . 2 9.4 22.9
shell 5.00 5.50 2042 75 0 0 0 0 0 9 42 22 . 2 3.7 17.1
shell 5.50 6.00 2442 7 0 0 0 0 0 0 3 4 . 0 0.3 12.6
shell 6.00 6.50 2870 1 0 0 0 0 0 0 0 0 . 1 0.0 9.6
shell 6.50 7.00 2958 0 0 0 0 0 0 0 0 0 . 0 0.0 7.7
shell 7.00 7.50 3173 0 0 0 0 0 0 0 0 0 . 0 0.0 6.4
shell 7.50 8.00 3504 0 0 0 0 0 0 0 0 0 . 0 0.0 5.4
shell 8.00 8.50 3866 0 0 0 0 0 0 0 0 0 . 0 0.0 4.5
shell 8.50 9.00 3968 0 0 0 0 0 0 0 0 0 . 0 0.0 3.9
sums . . 29541 1163 0 23 123 217 313 302 117 53 . 15 . .
stop_
loop_
_NOE_completeness_comp.Entity_assembly_ID
_NOE_completeness_comp.Comp_index_ID
_NOE_completeness_comp.Comp_ID
_NOE_completeness_comp.Obs_atom_count
_NOE_completeness_comp.Constraint_observed_count
_NOE_completeness_comp.Constraint_expected_count
_NOE_completeness_comp.Constraint_matched_count
_NOE_completeness_comp.Completeness_cumulative_pct
_NOE_completeness_comp.Std_dev
_NOE_completeness_comp.Details
1 14 ASP 4 1 3 1 33.3 -0.2 .
1 15 MET 6 8 6 4 66.7 1.5 >sigma
1 16 VAL 5 12 11 5 45.5 0.4 .
1 17 THR 4 7 16 4 25.0 -0.7 .
1 18 ASP 4 11 12 5 41.7 0.2 .
1 19 LEU 7 20 25 11 44.0 0.3 .
1 20 ASP 4 13 17 7 41.2 0.2 .
1 21 VAL 5 18 32 9 28.1 -0.5 .
1 22 LYS 7 14 23 10 43.5 0.3 .
1 23 GLY 3 17 17 10 58.8 1.1 >sigma
1 24 LEU 7 36 40 17 42.5 0.2 .
1 25 GLY 3 19 21 11 52.4 0.7 .
1 26 TYR 6 15 18 9 50.0 0.6 .
1 27 ASP 4 26 18 11 61.1 1.2 >sigma
1 28 PHE 7 36 59 23 39.0 0.0 .
1 29 ILE 6 28 40 17 42.5 0.2 .
1 30 ASP 4 20 17 9 52.9 0.8 .
1 31 LEU 7 47 54 27 50.0 0.6 .
1 32 VAL 5 27 38 14 36.8 -0.1 .
1 33 THR 4 18 16 8 50.0 0.6 .
1 34 LYS 7 18 21 7 33.3 -0.2 .
1 35 SER 4 13 15 9 60.0 1.1 >sigma
1 36 PRO 5 9 9 7 77.8 2.0 >sigma
1 37 ASP 4 9 13 7 53.8 0.8 .
1 38 SER 4 5 11 3 27.3 -0.6 .
1 39 VAL 5 6 11 1 9.1 -1.5 >sigma
1 40 ASN 6 10 25 2 8.0 -1.6 >sigma
1 41 SER 4 13 21 6 28.6 -0.5 .
1 42 GLU 5 15 28 9 32.1 -0.3 .
1 43 HIS 6 18 29 12 41.4 0.2 .
1 44 GLU 5 30 28 18 64.3 1.4 >sigma
1 45 LEU 7 43 59 26 44.1 0.3 .
1 46 ALA 3 29 32 15 46.9 0.5 .
1 47 HIS 6 20 14 10 71.4 1.7 >sigma
1 48 PHE 7 44 58 31 53.4 0.8 .
1 49 LEU 7 28 56 18 32.1 -0.3 .
1 50 GLY 3 12 15 7 46.7 0.4 .
1 51 PRO 5 5 15 5 33.3 -0.2 .
1 52 HIS 6 13 30 8 26.7 -0.6 .
1 53 ASP 4 12 14 5 35.7 -0.1 .
1 54 PRO 5 3 33 2 6.1 -1.7 >sigma
1 55 GLU 5 25 26 16 61.5 1.2 >sigma
1 56 ILE 6 19 59 10 16.9 -1.1 >sigma
1 57 TYR 6 52 50 23 46.0 0.4 .
1 58 VAL 5 48 45 23 51.1 0.7 .
1 59 ASN 6 20 26 13 50.0 0.6 .
1 60 GLY 3 5 15 3 20.0 -0.9 .
1 61 LYS 7 28 22 14 63.6 1.3 >sigma
1 62 ILE 6 37 33 27 81.8 2.3 >sigma
1 63 GLN 7 47 50 27 54.0 0.8 .
1 64 THR 4 13 20 6 30.0 -0.4 .
1 65 THR 4 6 26 3 11.5 -1.4 >sigma
1 66 THR 4 15 21 9 42.9 0.2 .
1 67 ALA 3 22 27 15 55.6 0.9 .
1 68 PHE 7 23 63 11 17.5 -1.1 >sigma
1 69 LEU 7 27 39 16 41.0 0.2 .
1 70 GLN 7 33 29 16 55.2 0.9 .
1 71 PHE 7 42 48 25 52.1 0.7 .
1 72 PHE 7 41 58 23 39.7 0.1 .
1 73 ARG 7 32 28 19 67.9 1.5 >sigma
1 74 GLN 7 23 20 13 65.0 1.4 >sigma
1 75 GLY 3 14 19 8 42.1 0.2 .
1 76 LEU 7 31 35 18 51.4 0.7 .
1 77 PHE 7 29 58 18 31.0 -0.4 .
1 78 LYS 7 15 27 9 33.3 -0.2 .
1 79 LYS 7 10 11 5 45.5 0.4 .
1 80 LEU 7 9 29 5 17.2 -1.1 >sigma
1 81 LYS 7 8 19 4 21.1 -0.9 .
1 82 ASP 4 2 12 2 16.7 -1.1 >sigma
1 83 ALA 3 16 24 10 41.7 0.2 .
1 84 GLU 5 13 13 7 53.8 0.8 .
1 85 PHE 7 12 18 8 44.4 0.3 .
1 86 ALA 3 0 14 0 0.0 -2.0 >sigma
1 87 ILE 6 0 6 0 0.0 -2.0 >sigma
1 88 ASN 6 1 8 1 12.5 -1.3 >sigma
1 89 VAL 5 0 7 0 0.0 -2.0 >sigma
1 90 SER 4 0 8 0 0.0 -2.0 >sigma
1 91 GLY 3 0 7 0 0.0 -2.0 >sigma
1 92 LYS 7 0 7 0 0.0 -2.0 >sigma
1 93 VAL 5 0 8 0 0.0 -2.0 >sigma
1 94 LYS 7 0 9 0 0.0 -2.0 >sigma
1 95 GLU 5 6 11 5 45.5 0.4 .
1 96 GLY 3 10 9 7 77.8 2.0 >sigma
1 97 GLU 5 5 9 3 33.3 -0.2 .
1 98 GLY 3 0 12 0 0.0 -2.0 >sigma
1 99 TYR 6 23 28 15 53.6 0.8 .
1 100 LYS 7 15 18 8 44.4 0.3 .
1 101 LEU 7 13 28 10 35.7 -0.1 .
1 102 VAL 5 21 29 13 44.8 0.3 .
1 103 TRP 10 43 60 32 53.3 0.8 .
1 104 LYS 7 27 36 17 47.2 0.5 .
1 105 SER 4 19 22 12 54.5 0.8 .
1 106 ALA 3 11 10 7 70.0 1.6 >sigma
1 107 ALA 3 9 17 6 35.3 -0.1 .
1 108 GLN 7 13 15 7 46.7 0.4 .
1 109 ARG 7 5 11 5 45.5 0.4 .
1 110 SER 4 6 18 5 27.8 -0.5 .
1 111 HIS 6 0 8 0 0.0 -2.0 >sigma
1 112 ASP 4 4 17 3 17.6 -1.1 >sigma
1 113 GLN 7 1 7 1 14.3 -1.2 >sigma
1 114 LYS 7 15 38 10 26.3 -0.6 .
1 115 ILE 6 20 32 11 34.4 -0.2 .
1 116 ARG 7 7 22 4 18.2 -1.0 >sigma
1 117 TRP 10 22 49 16 32.7 -0.3 .
1 118 ASP 4 21 23 15 65.2 1.4 >sigma
1 119 GLU 5 28 38 20 52.6 0.8 .
1 120 ALA 3 29 27 20 74.1 1.9 >sigma
1 121 GLU 5 23 29 12 41.4 0.2 .
1 122 ALA 3 31 30 19 63.3 1.3 >sigma
1 123 TYR 6 30 42 17 40.5 0.1 .
1 124 ILE 6 38 54 21 38.9 0.0 .
1 125 TRP 10 10 40 4 10.0 -1.4 >sigma
1 126 ARG 7 11 20 8 40.0 0.1 .
1 127 ARG 7 15 28 7 25.0 -0.7 .
1 128 LYS 7 3 9 1 11.1 -1.4 >sigma
1 129 ASP 4 7 22 7 31.8 -0.3 .
1 130 GLY 3 6 11 3 27.3 -0.6 .
1 131 SER 4 11 13 6 46.2 0.4 .
1 132 CYS 4 11 27 6 22.2 -0.8 .
1 133 TRP 10 15 26 7 26.9 -0.6 .
1 134 LEU 7 16 57 6 10.5 -1.4 >sigma
1 135 HIS 6 6 25 4 16.0 -1.1 >sigma
1 136 SER 4 24 31 16 51.6 0.7 .
1 137 VAL 5 35 44 18 40.9 0.1 .
1 138 LYS 7 23 50 14 28.0 -0.5 .
1 139 PHE 7 39 50 21 42.0 0.2 .
1 140 ILE 6 34 46 17 37.0 -0.1 .
1 141 MET 6 19 31 15 48.4 0.5 .
1 142 SER 4 7 8 6 75.0 1.9 >sigma
1 143 LYS 7 10 27 6 22.2 -0.8 .
1 144 ALA 3 11 22 7 31.8 -0.3 .
1 145 ALA 3 12 13 5 38.5 0.0 .
1 146 PRO 5 6 9 3 33.3 -0.2 .
1 147 TYR 6 20 21 11 52.4 0.7 .
1 148 VAL 5 7 11 6 54.5 0.8 .
1 149 ALA 3 7 8 4 50.0 0.6 .
stop_
save_