Result table
| image | mrblock_id | pdb_id | bmrb_id | cing | stage | program | type | subtype | subsubtype |
|
|
638308 | 6nx4 RC | 30569 | cing | 4-filtered-FRED | Wattos | check | completeness | distance |
data_6nx4
save_NOE_Completeness
_NOE_completeness_stats.Sf_category NOE_completeness_statistics
_NOE_completeness_stats.Model_count 20
_NOE_completeness_stats.Residue_count 167
_NOE_completeness_stats.Total_atom_count 2559
_NOE_completeness_stats.Observable_atom_definition ob_standard
_NOE_completeness_stats.Observable_atom_count 896
_NOE_completeness_stats.Use_intra_residue_restraints no
_NOE_completeness_stats.Redundancy_threshold_pct 5.0
_NOE_completeness_stats.Distance_averaging_power 1.00
_NOE_completeness_stats.Completeness_cutoff 4.00
_NOE_completeness_stats.Completeness_cumulative_pct 32.1
_NOE_completeness_stats.Constraint_unexpanded_count 1439
_NOE_completeness_stats.Constraint_count 1891
_NOE_completeness_stats.Constraint_exp_unfiltered_count 1714
_NOE_completeness_stats.Constraint_exceptional_count 0
_NOE_completeness_stats.Constraint_nonobservable_count 0
_NOE_completeness_stats.Constraint_intraresidue_count 475
_NOE_completeness_stats.Constraint_surplus_count 136
_NOE_completeness_stats.Constraint_observed_count 1280
_NOE_completeness_stats.Constraint_expected_count 1649
_NOE_completeness_stats.Constraint_matched_count 529
_NOE_completeness_stats.Constraint_unmatched_count 751
_NOE_completeness_stats.Constraint_exp_nonobs_count 1120
_NOE_completeness_stats.Details
;
A detailed methodology description is available at:
http://nmr.cmbi.ru.nl/~jd/wattos/doc/Wattos/Soup/Constraint/dc_completeness.html
Please note that the contributions in ambiguous restraints are considered
separate 'restraints' for the sets defined below.
The cut off for all statistics except those in the by-shell table is
given below by the above tag: _NOE_completeness_stats.Completeness_cutoff
Description of the tags in this list:
* 1 * Administrative tag
* 2 * Administrative tag
* 3 * Administrative tag
* 4 * Number of models
* 5 * Number of residues
* 6 * Number of atoms
* 7 * Standard set name of observable atom definitions
see: Doreleijers et al., J.Biomol.NMR 14, 123-132 (1999).
* 8 * Observable atom(group)s
* 9 * Include intra residue restraints
* 10 * Surplus threshold for determining redundant restraints
* 11 * Power for averaging the distance over models
* 12 * Up to what distance are NOEs expected
* 13 * Cumulative completeness percentage
* 14 * Number of unexpanded restraints in restraint list.
* 15 * Number of restraints in restraint list. Set U
* 16 * Expected restraints based on criteria in list. Set V
Set V differs from set B only if intra residue restraints are analyzed.
* 17 * Exceptional restraints, i.e. with an unknown atom.Set E
* 18 * Not observable NOEs with e.g. hydroxyl Ser HG. Set O
Even though restraints with these atom types might have been observed they are
excluded from the analysis.
* 19 * Intra-residue restraints if not to be analyzed. Set I
* 20 * Surplus like double restraints. Set S
* 21 * Observed restraints. Set A = U - (E u O u I u S)
* 22 * Expected restraints based on criteria as in A. Set B = V - (I u S)
* 23 * Observed restraints matched to the expected. Set M = A n B
* 24 * Observed restraints that were not expected. Set C = A - M
* 25 * Expected restraints that were not observed. Set D = B - M
* 26 * This tag
Description of the tags in the class table:
* 1 * Class of restraint. Note that 'medium-range' involves (2<=i<=4) contacts.
Possible values are: intraresidue,sequential,medium-range,long-range, and intermolecular.
* 2 * Observed restraints. Set A = U - (E u O u I u S)
* 3 * Expected restraints based on criteria as in A. Set B = V - (I u S)
* 4 * Observed restraints matched to the expected. Set M = A n B
* 5 * Completeness percentage
* 6 * Standard deviation from the average over the classes.
* 7 * Extra information
* 8 * Administrative tag
* 9 * Administrative tag
Description of the tags in the shell table.
The first row shows the lower limit of the shells requested and
The last row shows the total number of restraints over the shells.
* 1 * Description of the content of the row: edges, shell, or sums.
The value determines the meaning of the values to the nine 'Matched_shell_x' tags among others.
* 2 * Lower limit of shell of expected restraints.
* 3 * Upper limit of shell of expected restraints.
* 4 * Expected restraints based on criteria as in A. Set B = V - (I u S)
* 5 * Observed restraints matched to the expected. Set M = A n B
* 6 * Matched restraints with experimental distance in shell 1
* 7 * Matched restraints with experimental distance in shell 2
* 8 * Matched restraints with experimental distance in shell 3
* 9 * Matched restraints with experimental distance in shell 4
* 10 * Matched restraints with experimental distance in shell 5
* 11 * Matched restraints with experimental distance in shell 6
* 12 * Matched restraints with experimental distance in shell 7
* 13 * Matched restraints with experimental distance in shell 8
* 14 * Matched restraints with experimental distance in shell 9
* 15 * Matched restraints overflowing the last shell
* 16 * Completeness percentage for this shell
* 17 * Completeness percentage up to upper limit of this shell
* 18 * Administrative tag
* 19 * Administrative tag
Description of the tags in the residue table:
* 1 * Chain identifier
* 2 * Residue number
* 3 * Residue name
* 4 * Observable atom(group)s for this residue.
* 5 * Observed restraints. Set A = U - (E u O u I u S)
* 6 * Expected restraints based on criteria as in A. Set B = V - (I u S)
* 7 * Observed restraints matched to the expected. Set M = A n B
* 8 * Completeness percentage
* 9 * Standard deviation from the average over the residues.
* 10 * Extra information
* 11 * Administrative tag
* 12 * Administrative tag
;
loop_
_NOE_completeness_class.Type
_NOE_completeness_class.Constraint_observed_count
_NOE_completeness_class.Constraint_expected_count
_NOE_completeness_class.Constraint_matched_count
_NOE_completeness_class.Completeness_cumulative_pct
_NOE_completeness_class.Std_dev
_NOE_completeness_class.Details
intraresidue 0 0 0 . . "no intras"
sequential 454 671 244 36.4 0.9 .
medium-range 509 486 155 31.9 0.1 .
long-range 317 492 130 26.4 -0.9 .
intermolecular 0 0 0 . . "no multimer"
stop_
loop_
_NOE_completeness_shell.Type
_NOE_completeness_shell.Shell_start
_NOE_completeness_shell.Shell_end
_NOE_completeness_shell.Constraint_expected_count
_NOE_completeness_shell.Constraint_matched_count
_NOE_completeness_shell.Matched_shell_1
_NOE_completeness_shell.Matched_shell_2
_NOE_completeness_shell.Matched_shell_3
_NOE_completeness_shell.Matched_shell_4
_NOE_completeness_shell.Matched_shell_5
_NOE_completeness_shell.Matched_shell_6
_NOE_completeness_shell.Matched_shell_7
_NOE_completeness_shell.Matched_shell_8
_NOE_completeness_shell.Matched_shell_9
_NOE_completeness_shell.Matched_shell_overflow
_NOE_completeness_shell.Completeness_shell_pct
_NOE_completeness_shell.Completeness_cumulative_pct
edges . . . . 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 . . . .
shell 0.00 2.00 6 3 2 1 0 0 0 0 0 0 . 0 50.0 50.0
shell 2.00 2.50 118 63 4 32 19 7 1 0 0 0 . 0 53.4 53.2
shell 2.50 3.00 311 134 1 8 42 48 18 7 4 1 . 5 43.1 46.0
shell 3.00 3.50 407 126 0 0 5 22 31 36 22 8 . 2 31.0 38.7
shell 3.50 4.00 807 203 1 0 0 12 8 30 60 36 . 56 25.2 32.1
shell 4.00 4.50 1126 218 0 0 1 1 3 7 28 27 . 151 19.4 26.9
shell 4.50 5.00 1663 203 0 0 0 1 0 1 5 27 . 169 12.2 21.4
shell 5.00 5.50 2149 142 0 0 0 0 0 0 2 14 . 126 6.6 16.6
shell 5.50 6.00 2505 101 0 0 0 0 0 0 2 4 . 95 4.0 13.1
shell 6.00 6.50 2728 52 0 0 0 0 0 0 0 0 . 52 1.9 10.5
shell 6.50 7.00 2850 18 0 0 0 0 0 0 0 0 . 18 0.6 8.6
shell 7.00 7.50 3014 9 0 0 0 0 0 0 0 0 . 9 0.3 7.2
shell 7.50 8.00 3437 5 0 0 0 0 0 0 0 0 . 5 0.1 6.0
shell 8.00 8.50 3556 3 0 0 0 0 0 0 0 0 . 3 0.1 5.2
shell 8.50 9.00 3765 0 0 0 0 0 0 0 0 0 . 0 0.0 4.5
sums . . 28442 1280 8 41 67 91 61 81 123 117 . 691 . .
stop_
loop_
_NOE_completeness_comp.Entity_assembly_ID
_NOE_completeness_comp.Comp_index_ID
_NOE_completeness_comp.Comp_ID
_NOE_completeness_comp.Obs_atom_count
_NOE_completeness_comp.Constraint_observed_count
_NOE_completeness_comp.Constraint_expected_count
_NOE_completeness_comp.Constraint_matched_count
_NOE_completeness_comp.Completeness_cumulative_pct
_NOE_completeness_comp.Std_dev
_NOE_completeness_comp.Details
1 1 SER 4 0 3 0 0.0 -1.6 >sigma
1 2 HIS 6 0 7 0 0.0 -1.6 >sigma
1 3 MET 6 0 8 0 0.0 -1.6 >sigma
1 4 GLY 3 0 7 0 0.0 -1.6 >sigma
1 5 GLU 5 0 7 0 0.0 -1.6 >sigma
1 6 LEU 7 0 7 0 0.0 -1.6 >sigma
1 7 GLU 5 1 8 0 0.0 -1.6 >sigma
1 8 ALA 3 5 9 1 11.1 -1.1 >sigma
1 9 ILE 6 3 9 1 11.1 -1.1 >sigma
1 10 VAL 5 3 10 1 10.0 -1.1 >sigma
1 11 GLY 3 3 8 1 12.5 -1.0 .
1 12 LEU 7 2 6 0 0.0 -1.6 >sigma
1 13 GLY 3 2 6 0 0.0 -1.6 >sigma
1 14 LEU 7 2 6 0 0.0 -1.6 >sigma
1 15 MET 6 1 7 0 0.0 -1.6 >sigma
1 16 TYR 6 0 9 0 0.0 -1.6 >sigma
1 17 SER 4 2 8 1 12.5 -1.0 .
1 18 GLN 7 5 10 2 20.0 -0.6 .
1 19 LEU 7 6 10 4 40.0 0.4 .
1 20 PRO 5 5 14 3 21.4 -0.5 .
1 21 HIS 6 0 7 0 0.0 -1.6 >sigma
1 22 HIS 6 0 11 0 0.0 -1.6 >sigma
1 23 ILE 6 4 14 1 7.1 -1.3 >sigma
1 24 LEU 7 5 7 2 28.6 -0.2 .
1 25 ALA 3 1 7 1 14.3 -0.9 .
1 26 ASP 4 4 9 1 11.1 -1.1 >sigma
1 27 VAL 5 7 7 3 42.9 0.6 .
1 28 SER 4 9 7 4 57.1 1.3 >sigma
1 29 LEU 7 5 7 2 28.6 -0.2 .
1 30 LYS 7 4 9 3 33.3 0.1 .
1 31 GLU 5 7 6 4 66.7 1.8 >sigma
1 32 THR 4 11 10 2 20.0 -0.6 .
1 33 GLU 5 11 13 6 46.2 0.8 .
1 34 GLU 5 10 11 5 45.5 0.7 .
1 35 ASN 6 9 18 5 27.8 -0.2 .
1 36 LYS 7 11 18 6 33.3 0.1 .
1 37 THR 4 12 14 3 21.4 -0.5 .
1 38 LYS 7 8 9 4 44.4 0.7 .
1 39 GLY 3 8 8 2 25.0 -0.3 .
1 40 PHE 7 14 24 7 29.2 -0.1 .
1 41 ASP 4 10 14 6 42.9 0.6 .
1 42 TYR 6 19 16 9 56.3 1.3 >sigma
1 43 LEU 7 29 31 12 38.7 0.4 .
1 44 LEU 7 39 34 21 61.8 1.6 >sigma
1 45 LYS 7 25 18 12 66.7 1.8 >sigma
1 46 ALA 3 26 21 14 66.7 1.8 >sigma
1 47 ALA 3 40 40 19 47.5 0.8 .
1 48 GLU 5 28 22 18 81.8 2.6 >sigma
1 49 ALA 3 17 15 11 73.3 2.2 >sigma
1 50 GLY 3 13 11 6 54.5 1.2 >sigma
1 51 ASP 4 7 15 5 33.3 0.1 .
1 52 ARG 7 5 22 4 18.2 -0.7 .
1 53 GLN 7 11 17 5 29.4 -0.1 .
1 54 SER 4 19 26 5 19.2 -0.6 .
1 55 MET 6 36 46 14 30.4 -0.1 .
1 56 ILE 6 23 39 10 25.6 -0.3 .
1 57 LEU 7 20 30 8 26.7 -0.3 .
1 58 VAL 5 39 47 19 40.4 0.5 .
1 59 ALA 3 28 35 17 48.6 0.9 .
1 60 ARG 7 11 22 7 31.8 0.0 .
1 61 ALA 3 18 30 10 33.3 0.1 .
1 62 PHE 7 35 43 13 30.2 -0.1 .
1 63 ASP 4 4 21 3 14.3 -0.9 .
1 64 SER 4 2 14 1 7.1 -1.3 >sigma
1 65 GLY 3 10 17 3 17.6 -0.7 .
1 66 GLN 7 6 13 1 7.7 -1.2 >sigma
1 67 ASN 6 6 15 3 20.0 -0.6 .
1 68 LEU 7 43 44 16 36.4 0.2 .
1 69 SER 4 13 12 3 25.0 -0.3 .
1 70 PRO 5 12 10 6 60.0 1.5 >sigma
1 71 ASP 4 9 12 6 50.0 0.9 .
1 72 ARG 7 18 19 7 36.8 0.3 .
1 73 CYS 4 7 7 3 42.9 0.6 .
1 74 GLN 7 6 14 3 21.4 -0.5 .
1 75 ASP 4 3 15 1 6.7 -1.3 >sigma
1 76 TRP 10 15 24 9 37.5 0.3 .
1 77 LEU 7 26 37 10 27.0 -0.2 .
1 78 GLU 5 11 20 6 30.0 -0.1 .
1 79 ALA 3 34 33 17 51.5 1.0 >sigma
1 80 LEU 7 24 53 12 22.6 -0.5 .
1 81 HIS 6 15 24 4 16.7 -0.8 .
1 82 TRP 10 40 48 15 31.3 -0.0 .
1 83 TYR 6 23 37 7 18.9 -0.7 .
1 84 ASN 6 15 19 3 15.8 -0.8 .
1 85 THR 4 19 22 9 40.9 0.5 .
1 86 ALA 3 23 22 9 40.9 0.5 .
1 87 LEU 7 24 35 8 22.9 -0.5 .
1 88 GLU 5 19 13 8 61.5 1.5 >sigma
1 89 MET 6 13 27 5 18.5 -0.7 .
1 90 THR 4 11 10 3 30.0 -0.1 .
1 91 ASP 4 10 5 4 80.0 2.5 >sigma
1 92 CYS 4 13 6 4 66.7 1.8 >sigma
1 93 ASP 4 6 8 2 25.0 -0.3 .
1 94 GLU 5 7 7 3 42.9 0.6 .
1 95 GLY 3 6 6 2 33.3 0.1 .
1 96 GLY 3 6 6 4 66.7 1.8 >sigma
1 97 GLU 5 6 6 4 66.7 1.8 >sigma
1 98 TYR 6 6 5 3 60.0 1.5 >sigma
1 99 ASP 4 9 7 4 57.1 1.3 >sigma
1 100 GLY 3 5 8 2 25.0 -0.3 .
1 101 MET 6 3 5 1 20.0 -0.6 .
1 102 GLN 7 6 5 2 40.0 0.4 .
1 103 ASP 4 7 6 3 50.0 0.9 .
1 104 GLU 5 4 13 3 23.1 -0.4 .
1 105 PRO 5 1 16 1 6.3 -1.3 >sigma
1 106 ARG 7 4 19 2 10.5 -1.1 >sigma
1 107 TYR 6 21 47 12 25.5 -0.3 .
1 108 MET 6 17 26 5 19.2 -0.6 .
1 109 MET 6 14 36 2 5.6 -1.4 >sigma
1 110 LEU 7 31 56 12 21.4 -0.5 .
1 111 ALA 3 35 26 12 46.2 0.8 .
1 112 ARG 7 21 18 4 22.2 -0.5 .
1 113 GLU 5 29 31 6 19.4 -0.6 .
1 114 ALA 3 38 32 16 50.0 0.9 .
1 115 GLU 5 19 19 3 15.8 -0.8 .
1 116 MET 6 20 35 10 28.6 -0.2 .
1 117 LEU 7 33 42 10 23.8 -0.4 .
1 118 PHE 7 30 41 7 17.1 -0.8 .
1 119 THR 4 15 14 6 42.9 0.6 .
1 120 GLY 3 16 14 5 35.7 0.2 .
1 121 GLY 3 10 7 2 28.6 -0.2 .
1 122 TYR 6 1 8 0 0.0 -1.6 >sigma
1 123 GLY 3 3 5 0 0.0 -1.6 >sigma
1 124 LEU 7 37 50 12 24.0 -0.4 .
1 125 GLU 5 14 8 3 37.5 0.3 .
1 126 LYS 7 24 23 7 30.4 -0.1 .
1 127 ASP 4 10 15 5 33.3 0.1 .
1 128 PRO 5 19 31 6 19.4 -0.6 .
1 129 GLN 7 10 24 8 33.3 0.1 .
1 130 ARG 7 21 32 6 18.8 -0.7 .
1 131 SER 4 19 32 8 25.0 -0.3 .
1 132 GLY 3 13 21 5 23.8 -0.4 .
1 133 ASP 4 15 17 4 23.5 -0.4 .
1 134 LEU 7 37 56 14 25.0 -0.3 .
1 135 TYR 6 18 49 7 14.3 -0.9 .
1 136 THR 4 21 23 10 43.5 0.6 .
1 137 GLN 7 23 31 9 29.0 -0.1 .
1 138 ALA 3 37 41 14 34.1 0.1 .
1 139 ALA 3 47 35 18 51.4 1.0 >sigma
1 140 GLU 5 18 18 7 38.9 0.4 .
1 141 ALA 3 25 27 9 33.3 0.1 .
1 142 ALA 3 31 40 17 42.5 0.6 .
1 143 MET 6 28 31 15 48.4 0.9 .
1 144 GLU 5 24 14 9 64.3 1.7 >sigma
1 145 ALA 3 23 19 10 52.6 1.1 >sigma
1 146 MET 6 14 8 5 62.5 1.6 >sigma
1 147 LYS 7 13 33 8 24.2 -0.4 .
1 148 GLY 3 11 9 2 22.2 -0.5 .
1 149 ARG 7 9 11 6 54.5 1.2 >sigma
1 150 LEU 7 30 33 11 33.3 0.1 .
1 151 ALA 3 34 29 20 69.0 1.9 >sigma
1 152 ASN 6 18 14 7 50.0 0.9 .
1 153 GLN 7 20 20 8 40.0 0.4 .
1 154 TYR 6 44 51 15 29.4 -0.1 .
1 155 TYR 6 20 27 8 29.6 -0.1 .
1 156 GLN 7 28 17 8 47.1 0.8 .
1 157 LYS 7 23 24 9 37.5 0.3 .
1 158 ALA 3 38 30 15 50.0 0.9 .
1 159 GLU 5 25 17 10 58.8 1.4 >sigma
1 160 GLU 5 24 18 11 61.1 1.5 >sigma
1 161 ALA 3 29 25 15 60.0 1.5 >sigma
1 162 TRP 10 30 32 11 34.4 0.1 .
1 163 ALA 3 14 14 7 50.0 0.9 .
1 164 GLN 7 16 14 7 50.0 0.9 .
1 165 MET 6 17 33 10 30.3 -0.1 .
1 166 GLU 5 6 8 4 50.0 0.9 .
1 167 GLU 5 2 3 1 33.3 0.1 .
stop_
save_