Result table
| image | mrblock_id | pdb_id | bmrb_id | cing | stage | program | type | subtype | subsubtype |
|
|
629766 | 6emq RC | 34181 | cing | 4-filtered-FRED | Wattos | check | completeness | distance |
data_6emq
save_NOE_Completeness
_NOE_completeness_stats.Sf_category NOE_completeness_statistics
_NOE_completeness_stats.Model_count 40
_NOE_completeness_stats.Residue_count 165
_NOE_completeness_stats.Total_atom_count 2506
_NOE_completeness_stats.Observable_atom_definition ob_standard
_NOE_completeness_stats.Observable_atom_count 891
_NOE_completeness_stats.Use_intra_residue_restraints no
_NOE_completeness_stats.Redundancy_threshold_pct 5.0
_NOE_completeness_stats.Distance_averaging_power 1.00
_NOE_completeness_stats.Completeness_cutoff 4.00
_NOE_completeness_stats.Completeness_cumulative_pct 48.6
_NOE_completeness_stats.Constraint_unexpanded_count 2149
_NOE_completeness_stats.Constraint_count 2149
_NOE_completeness_stats.Constraint_exp_unfiltered_count 1979
_NOE_completeness_stats.Constraint_exceptional_count 0
_NOE_completeness_stats.Constraint_nonobservable_count 14
_NOE_completeness_stats.Constraint_intraresidue_count 645
_NOE_completeness_stats.Constraint_surplus_count 153
_NOE_completeness_stats.Constraint_observed_count 1337
_NOE_completeness_stats.Constraint_expected_count 1846
_NOE_completeness_stats.Constraint_matched_count 897
_NOE_completeness_stats.Constraint_unmatched_count 440
_NOE_completeness_stats.Constraint_exp_nonobs_count 949
_NOE_completeness_stats.Details
;
A detailed methodology description is available at:
http://nmr.cmbi.ru.nl/~jd/wattos/doc/Wattos/Soup/Constraint/dc_completeness.html
Please note that the contributions in ambiguous restraints are considered
separate 'restraints' for the sets defined below.
The cut off for all statistics except those in the by-shell table is
given below by the above tag: _NOE_completeness_stats.Completeness_cutoff
Description of the tags in this list:
* 1 * Administrative tag
* 2 * Administrative tag
* 3 * Administrative tag
* 4 * Number of models
* 5 * Number of residues
* 6 * Number of atoms
* 7 * Standard set name of observable atom definitions
see: Doreleijers et al., J.Biomol.NMR 14, 123-132 (1999).
* 8 * Observable atom(group)s
* 9 * Include intra residue restraints
* 10 * Surplus threshold for determining redundant restraints
* 11 * Power for averaging the distance over models
* 12 * Up to what distance are NOEs expected
* 13 * Cumulative completeness percentage
* 14 * Number of unexpanded restraints in restraint list.
* 15 * Number of restraints in restraint list. Set U
* 16 * Expected restraints based on criteria in list. Set V
Set V differs from set B only if intra residue restraints are analyzed.
* 17 * Exceptional restraints, i.e. with an unknown atom.Set E
* 18 * Not observable NOEs with e.g. hydroxyl Ser HG. Set O
Even though restraints with these atom types might have been observed they are
excluded from the analysis.
* 19 * Intra-residue restraints if not to be analyzed. Set I
* 20 * Surplus like double restraints. Set S
* 21 * Observed restraints. Set A = U - (E u O u I u S)
* 22 * Expected restraints based on criteria as in A. Set B = V - (I u S)
* 23 * Observed restraints matched to the expected. Set M = A n B
* 24 * Observed restraints that were not expected. Set C = A - M
* 25 * Expected restraints that were not observed. Set D = B - M
* 26 * This tag
Description of the tags in the class table:
* 1 * Class of restraint. Note that 'medium-range' involves (2<=i<=4) contacts.
Possible values are: intraresidue,sequential,medium-range,long-range, and intermolecular.
* 2 * Observed restraints. Set A = U - (E u O u I u S)
* 3 * Expected restraints based on criteria as in A. Set B = V - (I u S)
* 4 * Observed restraints matched to the expected. Set M = A n B
* 5 * Completeness percentage
* 6 * Standard deviation from the average over the classes.
* 7 * Extra information
* 8 * Administrative tag
* 9 * Administrative tag
Description of the tags in the shell table.
The first row shows the lower limit of the shells requested and
The last row shows the total number of restraints over the shells.
* 1 * Description of the content of the row: edges, shell, or sums.
The value determines the meaning of the values to the nine 'Matched_shell_x' tags among others.
* 2 * Lower limit of shell of expected restraints.
* 3 * Upper limit of shell of expected restraints.
* 4 * Expected restraints based on criteria as in A. Set B = V - (I u S)
* 5 * Observed restraints matched to the expected. Set M = A n B
* 6 * Matched restraints with experimental distance in shell 1
* 7 * Matched restraints with experimental distance in shell 2
* 8 * Matched restraints with experimental distance in shell 3
* 9 * Matched restraints with experimental distance in shell 4
* 10 * Matched restraints with experimental distance in shell 5
* 11 * Matched restraints with experimental distance in shell 6
* 12 * Matched restraints with experimental distance in shell 7
* 13 * Matched restraints with experimental distance in shell 8
* 14 * Matched restraints with experimental distance in shell 9
* 15 * Matched restraints overflowing the last shell
* 16 * Completeness percentage for this shell
* 17 * Completeness percentage up to upper limit of this shell
* 18 * Administrative tag
* 19 * Administrative tag
Description of the tags in the residue table:
* 1 * Chain identifier
* 2 * Residue number
* 3 * Residue name
* 4 * Observable atom(group)s for this residue.
* 5 * Observed restraints. Set A = U - (E u O u I u S)
* 6 * Expected restraints based on criteria as in A. Set B = V - (I u S)
* 7 * Observed restraints matched to the expected. Set M = A n B
* 8 * Completeness percentage
* 9 * Standard deviation from the average over the residues.
* 10 * Extra information
* 11 * Administrative tag
* 12 * Administrative tag
;
loop_
_NOE_completeness_class.Type
_NOE_completeness_class.Constraint_observed_count
_NOE_completeness_class.Constraint_expected_count
_NOE_completeness_class.Constraint_matched_count
_NOE_completeness_class.Completeness_cumulative_pct
_NOE_completeness_class.Std_dev
_NOE_completeness_class.Details
intraresidue 0 0 0 . . "no intras"
sequential 457 695 314 45.2 -0.9 .
medium-range 399 490 241 49.2 0.1 .
long-range 481 661 342 51.7 0.8 .
intermolecular 0 0 0 . . "no multimer"
stop_
loop_
_NOE_completeness_shell.Type
_NOE_completeness_shell.Shell_start
_NOE_completeness_shell.Shell_end
_NOE_completeness_shell.Constraint_expected_count
_NOE_completeness_shell.Constraint_matched_count
_NOE_completeness_shell.Matched_shell_1
_NOE_completeness_shell.Matched_shell_2
_NOE_completeness_shell.Matched_shell_3
_NOE_completeness_shell.Matched_shell_4
_NOE_completeness_shell.Matched_shell_5
_NOE_completeness_shell.Matched_shell_6
_NOE_completeness_shell.Matched_shell_7
_NOE_completeness_shell.Matched_shell_8
_NOE_completeness_shell.Matched_shell_9
_NOE_completeness_shell.Matched_shell_overflow
_NOE_completeness_shell.Completeness_shell_pct
_NOE_completeness_shell.Completeness_cumulative_pct
edges . . . . 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 . . . .
shell 0.00 2.00 2 1 0 0 0 0 1 0 0 0 . 0 50.0 50.0
shell 2.00 2.50 150 126 0 17 62 32 14 1 0 0 . 0 84.0 83.6
shell 2.50 3.00 450 288 0 2 49 133 77 25 2 0 . 0 64.0 68.9
shell 3.00 3.50 450 235 0 2 12 59 109 43 10 0 . 0 52.2 61.8
shell 3.50 4.00 794 247 0 0 3 40 115 66 23 0 . 0 31.1 48.6
shell 4.00 4.50 1269 221 0 0 0 3 70 85 53 8 . 2 17.4 35.9
shell 4.50 5.00 1783 163 0 0 0 0 20 72 54 16 . 1 9.1 26.2
shell 5.00 5.50 2291 44 0 0 0 0 2 5 16 21 . 0 1.9 18.4
shell 5.50 6.00 2650 9 0 0 0 0 0 0 4 5 . 0 0.3 13.6
shell 6.00 6.50 2717 3 0 0 0 0 0 0 2 1 . 0 0.1 10.6
shell 6.50 7.00 3069 0 0 0 0 0 0 0 0 0 . 0 0.0 8.6
shell 7.00 7.50 3319 0 0 0 0 0 0 0 0 0 . 0 0.0 7.1
shell 7.50 8.00 3693 0 0 0 0 0 0 0 0 0 . 0 0.0 5.9
shell 8.00 8.50 3935 0 0 0 0 0 0 0 0 0 . 0 0.0 5.0
shell 8.50 9.00 4066 0 0 0 0 0 0 0 0 0 . 0 0.0 4.4
sums . . 30638 1337 0 21 126 267 408 297 164 51 . 3 . .
stop_
loop_
_NOE_completeness_comp.Entity_assembly_ID
_NOE_completeness_comp.Comp_index_ID
_NOE_completeness_comp.Comp_ID
_NOE_completeness_comp.Obs_atom_count
_NOE_completeness_comp.Constraint_observed_count
_NOE_completeness_comp.Constraint_expected_count
_NOE_completeness_comp.Constraint_matched_count
_NOE_completeness_comp.Completeness_cumulative_pct
_NOE_completeness_comp.Std_dev
_NOE_completeness_comp.Details
1 1 SER 4 0 2 0 0.0 -1.6 >sigma
1 2 ASN 6 0 6 0 0.0 -1.6 >sigma
1 3 ALA 3 0 7 0 0.0 -1.6 >sigma
1 4 ALA 3 0 6 0 0.0 -1.6 >sigma
1 5 SER 4 0 7 0 0.0 -1.6 >sigma
1 6 TRP 10 1 8 1 12.5 -1.1 >sigma
1 7 GLU 5 4 11 3 27.3 -0.5 .
1 8 THR 4 3 10 2 20.0 -0.8 .
1 9 SER 4 0 10 0 0.0 -1.6 >sigma
1 10 MET 6 27 41 21 51.2 0.4 .
1 11 ASP 4 4 18 4 22.2 -0.7 .
1 12 SER 4 7 13 4 30.8 -0.4 .
1 13 ARG 7 20 28 14 50.0 0.3 .
1 14 LEU 7 49 53 34 64.2 0.9 .
1 15 GLN 7 10 16 6 37.5 -0.1 .
1 16 ARG 7 13 21 11 52.4 0.4 .
1 17 ILE 6 50 55 36 65.5 0.9 .
1 18 HIS 6 24 34 17 50.0 0.3 .
1 19 ALA 3 23 19 13 68.4 1.1 >sigma
1 20 GLU 5 15 24 14 58.3 0.7 .
1 21 ILE 6 48 59 34 57.6 0.6 .
1 22 LYS 7 29 30 18 60.0 0.7 .
1 23 ASN 6 16 19 11 57.9 0.6 .
1 24 SER 4 9 28 5 17.9 -0.9 .
1 25 LEU 7 61 63 37 58.7 0.7 .
1 26 LYS 7 25 30 14 46.7 0.2 .
1 27 ILE 6 33 34 15 44.1 0.1 .
1 28 ASP 4 6 15 2 13.3 -1.1 >sigma
1 29 ASN 6 11 14 4 28.6 -0.5 .
1 30 LEU 7 40 32 20 62.5 0.8 .
1 31 ASP 4 15 19 9 47.4 0.2 .
1 32 VAL 5 38 34 26 76.5 1.4 >sigma
1 33 ASN 6 21 18 13 72.2 1.2 >sigma
1 34 ARG 7 8 20 6 30.0 -0.4 .
1 35 CYS 4 22 31 12 38.7 -0.1 .
1 36 ILE 6 42 47 26 55.3 0.5 .
1 37 GLU 5 16 21 11 52.4 0.4 .
1 38 ALA 3 31 28 21 75.0 1.3 >sigma
1 39 LEU 7 46 61 30 49.2 0.3 .
1 40 ASP 4 15 17 10 58.8 0.7 .
1 41 GLU 5 17 23 13 56.5 0.6 .
1 42 LEU 7 66 67 42 62.7 0.8 .
1 43 ALA 3 27 26 16 61.5 0.8 .
1 44 SER 4 8 9 4 44.4 0.1 .
1 45 LEU 7 40 47 24 51.1 0.4 .
1 46 GLN 7 8 7 4 57.1 0.6 .
1 47 VAL 5 51 47 32 68.1 1.0 >sigma
1 48 THR 4 25 23 15 65.2 0.9 .
1 49 MET 6 30 33 17 51.5 0.4 .
1 50 GLN 7 12 18 8 44.4 0.1 .
1 51 GLN 7 24 39 18 46.2 0.2 .
1 52 ALA 3 31 32 21 65.6 0.9 .
1 53 GLN 7 18 26 13 50.0 0.3 .
1 54 LYS 7 7 19 5 26.3 -0.6 .
1 55 HIS 6 12 27 8 29.6 -0.4 .
1 56 THR 4 22 29 18 62.1 0.8 .
1 57 GLU 5 6 13 5 38.5 -0.1 .
1 58 MET 6 34 51 24 47.1 0.2 .
1 59 ILE 6 59 62 48 77.4 1.4 >sigma
1 60 THR 4 30 32 19 59.4 0.7 .
1 61 THR 4 31 38 18 47.4 0.2 .
1 62 LEU 7 44 61 31 50.8 0.4 .
1 63 LYS 7 20 36 19 52.8 0.4 .
1 64 LYS 7 16 34 10 29.4 -0.5 .
1 65 ILE 6 55 60 38 63.3 0.9 .
1 66 ARG 7 14 39 9 23.1 -0.7 .
1 67 ARG 7 10 23 8 34.8 -0.2 .
1 68 PHE 7 54 66 40 60.6 0.8 .
1 69 LYS 7 22 28 18 64.3 0.9 .
1 70 VAL 5 33 29 22 75.9 1.3 >sigma
1 71 SER 4 25 27 20 74.1 1.3 >sigma
1 72 GLN 7 10 16 9 56.3 0.6 .
1 73 VAL 5 31 30 19 63.3 0.9 .
1 74 ILE 6 68 64 44 68.8 1.1 >sigma
1 75 MET 6 28 39 24 61.5 0.8 .
1 76 GLU 5 15 16 9 56.3 0.6 .
1 77 LYS 7 26 44 18 40.9 -0.0 .
1 78 SER 4 21 34 15 44.1 0.1 .
1 79 THR 4 21 25 12 48.0 0.3 .
1 80 MET 6 21 30 17 56.7 0.6 .
1 81 LEU 7 52 65 38 58.5 0.7 .
1 82 TYR 6 33 56 25 44.6 0.1 .
1 83 ASN 6 18 26 14 53.8 0.5 .
1 84 LYS 7 20 36 13 36.1 -0.2 .
1 85 PHE 7 59 68 41 60.3 0.7 .
1 86 LYS 7 24 48 18 37.5 -0.1 .
1 87 ASN 6 17 19 12 63.2 0.8 .
1 88 MET 6 35 39 22 56.4 0.6 .
1 89 PHE 7 41 47 26 55.3 0.5 .
1 90 LEU 7 30 22 10 45.5 0.2 .
1 91 VAL 5 14 9 5 55.6 0.6 .
1 92 GLY 3 4 6 3 50.0 0.3 .
1 93 GLU 5 3 7 2 28.6 -0.5 .
1 94 GLY 3 3 7 2 28.6 -0.5 .
1 95 ASP 4 3 7 3 42.9 0.1 .
1 96 SER 4 5 6 4 66.7 1.0 .
1 97 VAL 5 7 7 6 85.7 1.7 >sigma
1 98 ILE 6 14 12 8 66.7 1.0 .
1 99 THR 4 7 7 3 42.9 0.1 .
1 100 GLN 7 8 10 4 40.0 -0.0 .
1 101 VAL 5 9 7 6 85.7 1.7 >sigma
1 102 LEU 7 4 6 3 50.0 0.3 .
1 103 ASN 6 0 6 0 0.0 -1.6 >sigma
1 104 LYS 7 0 8 0 0.0 -1.6 >sigma
1 105 SER 4 0 9 0 0.0 -1.6 >sigma
1 106 GLY 3 0 6 0 0.0 -1.6 >sigma
1 107 GLY 3 0 5 0 0.0 -1.6 >sigma
1 108 SER 4 0 7 0 0.0 -1.6 >sigma
1 109 GLY 3 0 6 0 0.0 -1.6 >sigma
1 110 SER 4 0 6 0 0.0 -1.6 >sigma
1 111 GLY 3 0 7 0 0.0 -1.6 >sigma
1 112 SER 4 0 7 0 0.0 -1.6 >sigma
1 113 GLY 3 0 7 0 0.0 -1.6 >sigma
1 114 SER 4 0 7 0 0.0 -1.6 >sigma
1 115 SER 4 0 8 0 0.0 -1.6 >sigma
1 116 GLY 3 0 7 0 0.0 -1.6 >sigma
1 117 PHE 7 2 8 2 25.0 -0.6 .
1 118 ASP 4 5 8 5 62.5 0.8 .
1 119 ALA 3 6 7 6 85.7 1.7 >sigma
1 120 ALA 3 6 7 5 71.4 1.2 >sigma
1 121 LEU 7 11 8 7 87.5 1.8 >sigma
1 122 GLN 7 11 10 6 60.0 0.7 .
1 123 VAL 5 8 10 6 60.0 0.7 .
1 124 SER 4 4 9 4 44.4 0.1 .
1 125 ALA 3 3 6 3 50.0 0.3 .
1 126 ALA 3 8 14 7 50.0 0.3 .
1 127 ILE 6 9 9 6 66.7 1.0 .
1 128 GLY 3 5 10 3 30.0 -0.4 .
1 129 THR 4 4 9 3 33.3 -0.3 .
1 130 ASN 6 1 12 1 8.3 -1.3 >sigma
1 131 LEU 7 20 35 11 31.4 -0.4 .
1 132 ARG 7 11 25 7 28.0 -0.5 .
1 133 ARG 7 8 16 2 12.5 -1.1 >sigma
1 134 PHE 7 19 30 13 43.3 0.1 .
1 135 ARG 7 7 19 5 26.3 -0.6 .
1 136 ALA 3 14 13 7 53.8 0.5 .
1 137 VAL 5 36 40 26 65.0 0.9 .
1 138 PHE 7 34 48 21 43.8 0.1 .
1 139 GLY 3 0 8 0 0.0 -1.6 >sigma
1 140 GLU 5 0 8 0 0.0 -1.6 >sigma
1 141 SER 4 0 9 0 0.0 -1.6 >sigma
1 142 GLY 3 0 7 0 0.0 -1.6 >sigma
1 143 GLY 3 0 6 0 0.0 -1.6 >sigma
1 144 GLY 3 0 6 0 0.0 -1.6 >sigma
1 145 GLY 3 0 6 0 0.0 -1.6 >sigma
1 146 GLY 3 0 6 0 0.0 -1.6 >sigma
1 147 SER 4 0 7 0 0.0 -1.6 >sigma
1 148 GLY 3 0 7 0 0.0 -1.6 >sigma
1 149 GLU 5 4 11 4 36.4 -0.2 .
1 150 ASP 4 8 8 6 75.0 1.3 >sigma
1 151 GLU 5 6 12 4 33.3 -0.3 .
1 152 GLN 7 17 26 14 53.8 0.5 .
1 153 PHE 7 18 55 14 25.5 -0.6 .
1 154 LEU 7 23 26 15 57.7 0.6 .
1 155 GLY 3 8 22 4 18.2 -0.9 .
1 156 PHE 7 30 55 21 38.2 -0.1 .
1 157 GLY 3 6 14 2 14.3 -1.0 >sigma
1 158 SER 4 0 7 0 0.0 -1.6 >sigma
1 159 ASP 4 1 7 1 14.3 -1.0 >sigma
1 160 GLU 5 3 6 3 50.0 0.3 .
1 161 GLU 5 6 6 4 66.7 1.0 .
1 162 VAL 5 8 5 5 100.0 2.3 >sigma
1 163 ARG 7 7 7 5 71.4 1.2 >sigma
1 164 VAL 5 8 7 6 85.7 1.7 >sigma
1 165 ARG 7 5 4 4 100.0 2.3 >sigma
stop_
save_