Result table
| image | mrblock_id | pdb_id | bmrb_id | cing | stage | program | type | subtype | subsubtype | item_count |
|
|
617628 | 5uzz RC | 30258 | cing | 2-parsed | STAR | distance | hydrogen bond | simple | 33 |
data_5uzz_MR_file_constraints
save_Conversion_project
_Study_list.Sf_category study_list
_Study_list.Entry_ID parsed_5uzz
_Study_list.ID 1
loop_
_Study.ID
_Study.Name
_Study.Type
_Study.Details
_Study.Entry_ID
_Study.Study_list_ID
1 "Conversion project" NMR . parsed_5uzz 1
stop_
save_
save_entry_information
_Entry.Sf_category entry_information
_Entry.ID parsed_5uzz
_Entry.Title "Original constraint list(s)"
_Entry.Version_type original
_Entry.Submission_date .
_Entry.Accession_date .
_Entry.Last_release_date .
_Entry.Original_release_date .
_Entry.Origination .
_Entry.NMR_STAR_version 3.1
_Entry.Original_NMR_STAR_version .
_Entry.Experimental_method NMR
_Entry.Experimental_method_subtype .
loop_
_Related_entries.Database_name
_Related_entries.Database_accession_code
_Related_entries.Relationship
_Related_entries.Entry_ID
PDB 5uzz "Master copy" parsed_5uzz
stop_
save_
save_global_Org_file_characteristics
_Constraint_stat_list.Sf_category constraint_statistics
_Constraint_stat_list.Entry_ID parsed_5uzz
_Constraint_stat_list.ID 1
loop_
_Constraint_file.ID
_Constraint_file.Constraint_filename
_Constraint_file.Software_ID
_Constraint_file.Software_label
_Constraint_file.Software_name
_Constraint_file.Block_ID
_Constraint_file.Constraint_type
_Constraint_file.Constraint_subtype
_Constraint_file.Constraint_subsubtype
_Constraint_file.Constraint_number
_Constraint_file.Entry_ID
_Constraint_file.Constraint_stat_list_ID
1 5uzz.mr . . "MR format" 1 comment "Not applicable" "Not applicable" 0 parsed_5uzz 1
1 5uzz.mr . . XPLOR/CNS 2 distance NOE simple 35 parsed_5uzz 1
1 5uzz.mr . . XPLOR/CNS 3 distance "hydrogen bond" simple 12 parsed_5uzz 1
1 5uzz.mr . . XPLOR/CNS 4 distance NOE simple 236 parsed_5uzz 1
1 5uzz.mr . . XPLOR/CNS 5 distance "hydrogen bond" simple 33 parsed_5uzz 1
1 5uzz.mr . . XPLOR/CNS 6 "dihedral angle" "Not applicable" "Not applicable" 0 parsed_5uzz 1
1 5uzz.mr . . XPLOR/CNS 7 distance NOE simple 0 parsed_5uzz 1
1 5uzz.mr . . XPLOR/CNS 8 planarity "Not applicable" "Not applicable" 0 parsed_5uzz 1
1 5uzz.mr . . "MR format" 9 "nomenclature mapping" "Not applicable" "Not applicable" 0 parsed_5uzz 1
stop_
save_
save_CNS/XPLOR_distance_constraints_5
_Distance_constraint_list.Sf_category distance_constraints
_Distance_constraint_list.Entry_ID parsed_5uzz
_Distance_constraint_list.ID 1
_Distance_constraint_list.Constraint_type "hydrogen bond"
_Distance_constraint_list.Constraint_file_ID 1
_Distance_constraint_list.Block_ID 5
_Distance_constraint_list.Details "Generated by Wattos"
loop_
_Dist_constraint_tree.Constraint_ID
_Dist_constraint_tree.Node_ID
_Dist_constraint_tree.Down_node_ID
_Dist_constraint_tree.Right_node_ID
_Dist_constraint_tree.Logic_operation
_Dist_constraint_tree.Entry_ID
_Dist_constraint_tree.Distance_constraint_list_ID
1 1 . . . parsed_5uzz 1
2 1 . . . parsed_5uzz 1
3 1 . . . parsed_5uzz 1
4 1 . . . parsed_5uzz 1
5 1 . . . parsed_5uzz 1
6 1 . . . parsed_5uzz 1
7 1 . . . parsed_5uzz 1
8 1 . . . parsed_5uzz 1
9 1 . . . parsed_5uzz 1
10 1 . . . parsed_5uzz 1
11 1 . . . parsed_5uzz 1
12 1 . . . parsed_5uzz 1
13 1 . . . parsed_5uzz 1
14 1 . . . parsed_5uzz 1
15 1 . . . parsed_5uzz 1
16 1 . . . parsed_5uzz 1
17 1 . . . parsed_5uzz 1
18 1 . . . parsed_5uzz 1
19 1 . . . parsed_5uzz 1
20 1 . . . parsed_5uzz 1
21 1 . . . parsed_5uzz 1
22 1 . . . parsed_5uzz 1
23 1 . . . parsed_5uzz 1
24 1 . . . parsed_5uzz 1
25 1 . . . parsed_5uzz 1
26 1 . . . parsed_5uzz 1
27 1 . . . parsed_5uzz 1
28 1 . . . parsed_5uzz 1
29 1 . . . parsed_5uzz 1
30 1 . . . parsed_5uzz 1
31 1 . . . parsed_5uzz 1
32 1 . . . parsed_5uzz 1
33 1 . . . parsed_5uzz 1
stop_
loop_
_Dist_constraint.Tree_node_member_constraint_ID
_Dist_constraint.Tree_node_member_node_ID
_Dist_constraint.Constraint_tree_node_member_ID
_Dist_constraint.Assembly_atom_ID
_Dist_constraint.Entity_assembly_ID
_Dist_constraint.Entity_ID
_Dist_constraint.Comp_index_ID
_Dist_constraint.Seq_ID
_Dist_constraint.Comp_ID
_Dist_constraint.Atom_ID
_Dist_constraint.Resonance_ID
_Dist_constraint.Auth_asym_ID
_Dist_constraint.Auth_seq_ID
_Dist_constraint.Auth_comp_ID
_Dist_constraint.Auth_atom_ID
_Dist_constraint.Entry_ID
_Dist_constraint.Distance_constraint_list_ID
1 1 1 . . . . . . . . . 22 . N1 parsed_5uzz 1
1 1 2 . . . . . . . . . 52 . N3 parsed_5uzz 1
2 1 1 . . . . . . . . . 22 . H1 parsed_5uzz 1
2 1 2 . . . . . . . . . 52 . N3 parsed_5uzz 1
3 1 1 . . . . . . . . . 22 . O6 parsed_5uzz 1
3 1 2 . . . . . . . . . 52 . N4 parsed_5uzz 1
4 1 1 . . . . . . . . . 22 . N2 parsed_5uzz 1
4 1 2 . . . . . . . . . 52 . O2 parsed_5uzz 1
5 1 1 . . . . . . . . . 22 . N2 parsed_5uzz 1
5 1 2 . . . . . . . . . 52 . N3 parsed_5uzz 1
6 1 1 . . . . . . . . . 22 . O6 parsed_5uzz 1
6 1 2 . . . . . . . . . 52 . N3 parsed_5uzz 1
7 1 1 . . . . . . . . . 23 . N1 parsed_5uzz 1
7 1 2 . . . . . . . . . 51 . N3 parsed_5uzz 1
8 1 1 . . . . . . . . . 23 . H1 parsed_5uzz 1
8 1 2 . . . . . . . . . 51 . N3 parsed_5uzz 1
9 1 1 . . . . . . . . . 23 . O6 parsed_5uzz 1
9 1 2 . . . . . . . . . 51 . N4 parsed_5uzz 1
10 1 1 . . . . . . . . . 23 . N2 parsed_5uzz 1
10 1 2 . . . . . . . . . 51 . O2 parsed_5uzz 1
11 1 1 . . . . . . . . . 23 . N2 parsed_5uzz 1
11 1 2 . . . . . . . . . 51 . N3 parsed_5uzz 1
12 1 1 . . . . . . . . . 23 . O6 parsed_5uzz 1
12 1 2 . . . . . . . . . 51 . N3 parsed_5uzz 1
13 1 1 . . . . . . . . . 24 . N3 parsed_5uzz 1
13 1 2 . . . . . . . . . 50 . N1 parsed_5uzz 1
14 1 1 . . . . . . . . . 24 . O4 parsed_5uzz 1
14 1 2 . . . . . . . . . 50 . N6 parsed_5uzz 1
15 1 1 . . . . . . . . . 24 . H3 parsed_5uzz 1
15 1 2 . . . . . . . . . 50 . N1 parsed_5uzz 1
16 1 1 . . . . . . . . . 25 . N1 parsed_5uzz 1
16 1 2 . . . . . . . . . 49 . N3 parsed_5uzz 1
17 1 1 . . . . . . . . . 25 . H1 parsed_5uzz 1
17 1 2 . . . . . . . . . 49 . N3 parsed_5uzz 1
18 1 1 . . . . . . . . . 25 . O6 parsed_5uzz 1
18 1 2 . . . . . . . . . 49 . N4 parsed_5uzz 1
19 1 1 . . . . . . . . . 25 . N2 parsed_5uzz 1
19 1 2 . . . . . . . . . 49 . O2 parsed_5uzz 1
20 1 1 . . . . . . . . . 25 . N2 parsed_5uzz 1
20 1 2 . . . . . . . . . 49 . N3 parsed_5uzz 1
21 1 1 . . . . . . . . . 25 . O6 parsed_5uzz 1
21 1 2 . . . . . . . . . 49 . N3 parsed_5uzz 1
22 1 1 . . . . . . . . . 26 . N3 parsed_5uzz 1
22 1 2 . . . . . . . . . 48 . N1 parsed_5uzz 1
23 1 1 . . . . . . . . . 26 . O4 parsed_5uzz 1
23 1 2 . . . . . . . . . 48 . N6 parsed_5uzz 1
24 1 1 . . . . . . . . . 26 . H3 parsed_5uzz 1
24 1 2 . . . . . . . . . 48 . N1 parsed_5uzz 1
25 1 1 . . . . . . . . . 27 . N3 parsed_5uzz 1
25 1 2 . . . . . . . . . 47 . N1 parsed_5uzz 1
26 1 1 . . . . . . . . . 27 . O4 parsed_5uzz 1
26 1 2 . . . . . . . . . 47 . N6 parsed_5uzz 1
27 1 1 . . . . . . . . . 27 . H3 parsed_5uzz 1
27 1 2 . . . . . . . . . 47 . N1 parsed_5uzz 1
28 1 1 . . . . . . . . . 28 . n1 parsed_5uzz 1
28 1 2 . . . . . . . . . 46 . n3 parsed_5uzz 1
29 1 1 . . . . . . . . . 28 . h1 parsed_5uzz 1
29 1 2 . . . . . . . . . 46 . n3 parsed_5uzz 1
30 1 1 . . . . . . . . . 28 . o6 parsed_5uzz 1
30 1 2 . . . . . . . . . 46 . n4 parsed_5uzz 1
31 1 1 . . . . . . . . . 28 . n2 parsed_5uzz 1
31 1 2 . . . . . . . . . 46 . o2 parsed_5uzz 1
32 1 1 . . . . . . . . . 28 . n2 parsed_5uzz 1
32 1 2 . . . . . . . . . 46 . n3 parsed_5uzz 1
33 1 1 . . . . . . . . . 28 . o6 parsed_5uzz 1
33 1 2 . . . . . . . . . 46 . n3 parsed_5uzz 1
stop_
loop_
_Dist_constraint_value.Constraint_ID
_Dist_constraint_value.Tree_node_ID
_Dist_constraint_value.Source_experiment_ID
_Dist_constraint_value.Spectral_peak_ID
_Dist_constraint_value.Intensity_val
_Dist_constraint_value.Intensity_lower_val_err
_Dist_constraint_value.Intensity_upper_val_err
_Dist_constraint_value.Distance_val
_Dist_constraint_value.Distance_lower_bound_val
_Dist_constraint_value.Distance_upper_bound_val
_Dist_constraint_value.Entry_ID
_Dist_constraint_value.Distance_constraint_list_ID
1 1 . . . . . 2.87 2.67 3.07 parsed_5uzz 1
2 1 . . . . . 1.86 1.66 2.06 parsed_5uzz 1
3 1 . . . . . 2.81 2.61 3.01 parsed_5uzz 1
4 1 . . . . . 2.81 2.61 3.01 parsed_5uzz 1
5 1 . . . . . 3.58 3.38 3.78 parsed_5uzz 1
6 1 . . . . . 3.63 3.43 3.83 parsed_5uzz 1
7 1 . . . . . 2.87 2.67 3.07 parsed_5uzz 1
8 1 . . . . . 1.86 1.66 2.06 parsed_5uzz 1
9 1 . . . . . 2.81 2.61 3.01 parsed_5uzz 1
10 1 . . . . . 2.81 2.61 3.01 parsed_5uzz 1
11 1 . . . . . 3.58 3.38 3.78 parsed_5uzz 1
12 1 . . . . . 3.63 3.43 3.83 parsed_5uzz 1
13 1 . . . . . 2.73 2.53 2.93 parsed_5uzz 1
14 1 . . . . . 2.92 2.72 3.12 parsed_5uzz 1
15 1 . . . . . 1.73 1.53 1.93 parsed_5uzz 1
16 1 . . . . . 2.87 2.67 3.07 parsed_5uzz 1
17 1 . . . . . 1.86 1.66 2.06 parsed_5uzz 1
18 1 . . . . . 2.81 2.61 3.01 parsed_5uzz 1
19 1 . . . . . 2.81 2.61 3.01 parsed_5uzz 1
20 1 . . . . . 3.58 3.38 3.78 parsed_5uzz 1
21 1 . . . . . 3.63 3.43 3.83 parsed_5uzz 1
22 1 . . . . . 2.73 2.53 2.93 parsed_5uzz 1
23 1 . . . . . 2.92 2.72 3.12 parsed_5uzz 1
24 1 . . . . . 1.73 1.53 1.93 parsed_5uzz 1
25 1 . . . . . 2.73 2.53 2.93 parsed_5uzz 1
26 1 . . . . . 2.92 2.72 3.12 parsed_5uzz 1
27 1 . . . . . 1.73 1.53 1.93 parsed_5uzz 1
28 1 . . . . . 2.87 2.67 3.07 parsed_5uzz 1
29 1 . . . . . 1.86 1.66 2.06 parsed_5uzz 1
30 1 . . . . . 2.81 2.61 3.01 parsed_5uzz 1
31 1 . . . . . 2.81 2.61 3.01 parsed_5uzz 1
32 1 . . . . . 3.58 3.38 3.78 parsed_5uzz 1
33 1 . . . . . 3.63 3.43 3.83 parsed_5uzz 1
stop_
loop_
_Dist_constraint_comment_org.ID
_Dist_constraint_comment_org.Comment_text
_Dist_constraint_comment_org.Comment_begin_line
_Dist_constraint_comment_org.Comment_begin_column
_Dist_constraint_comment_org.Comment_end_line
_Dist_constraint_comment_org.Comment_end_column
_Dist_constraint_comment_org.Entry_ID
_Dist_constraint_comment_org.Distance_constraint_list_ID
1
;
pre-miR21 RNA base-pair H-Bond restraints.
******** strong base-pairs in the lower-stem
G22 - C52
;
2 1 6 12 parsed_5uzz 1
2 "G23 - C51" 14 1 14 12 parsed_5uzz 1
3 "U24 - A50" 22 1 22 12 parsed_5uzz 1
4 "G25 - C49" 27 1 27 12 parsed_5uzz 1
5 "U26 - A48" 35 1 35 12 parsed_5uzz 1
6 "U27 - A47" 40 1 40 12 parsed_5uzz 1
7 "G28 - C46" 45 1 45 12 parsed_5uzz 1
8
;
A29
!!NOTE: The upper stem of miR21 appears to remain open with no base pairing based
!! on both low temp water NOESY and 15N HSQC data.
C30 - G45
assign (residue 30 and name N3) (residue 45 and name N1) 2.87 0.2 0.2
assign (residue 30 and name N3) (residue 45 and name N1) 1.86 0.2 0.2
assign (residue 30 and name N4) (residue 45 and name O6) 2.81 0.2 0.2
assign (residue 30 and name h41) (residue 45 and name O6) 1.86 0.2 0.2
assign (residue 30 and name O2) (residue 45 and name N2) 2.81 0.2 0.2
assign (residue 30 and name o2) (residue 45 and name h21) 1.86 0.2 0.2
U31 - G44
assign (residue 31 and name H3) (residue 44 and name O6) 1.9 0.1 0.30
assign (residue 31 and name N3) (residue 44 and name O6) 3.0 0.28 0.08
assign (residue 31 and name O2) (residue 44 and name H1) 1.9 0.1 0.30
assign (residue 31 and name O2) (residue 44 and name N1) 3.0 0.28 0.08
G32 - U43
assign (residue 32 and name O6) (residue 43 and name H3) 1.9 0.1 0.30
assign (residue 32 and name O6) (residue 43 and name N3) 3.0 0.28 0.08
assign (residue 32 and name H1) (residue 43 and name O2) 1.9 0.1 0.30
assign (residue 32 and name N1) (residue 43 and name O2) 3.0 0.28 0.08
U33 - A42
assign (residue 33 and name N3) (residue 42 and name N1) 2.73 0.2 0.2
assign (residue 33 and name O4) (residue 42 and name N6) 2.92 0.2 0.2
assign (residue 33 and name H3) (residue 42 and name N1) 1.73 0.2 0.2
assign (residue 33 and name O4) (residue 42 and name H61) 1.73 0.2 0.2
U34
G35 - C41
assign (residue 14 and name n1) (residue 20 and name n3) 2.87 .2 .2
assign (residue 14 and name h1) (residue 20 and name n3) 1.86 0.2 0.2
assign (residue 14 and name o6) (residue 20 and name n4) 2.81 .2 .2
assign (residue 14 and name n2) (residue 20 and name o2) 2.81 .2 .2
assign (residue 14 and name n2) (residue 20 and name n3) 3.58 0.2 0.2
assign (residue 14 and name o6) (residue 20 and name n3) 3.63 0.2 0.2
;
53 1 92 71 parsed_5uzz 1
stop_
loop_
_Dist_constraint_parse_err.ID
_Dist_constraint_parse_err.Content
_Dist_constraint_parse_err.Begin_line
_Dist_constraint_parse_err.Begin_column
_Dist_constraint_parse_err.End_line
_Dist_constraint_parse_err.End_column
_Dist_constraint_parse_err.Entry_ID
_Dist_constraint_parse_err.Distance_constraint_list_ID
1 "# Restraints file 2: miR21_hb_lower.tbl" 1 1 1 39 parsed_5uzz 1
stop_
save_