Result table
| image | mrblock_id | pdb_id | bmrb_id | cing | stage | position | program | type |
|
|
595258 | 2mvy RC | 25291 | cing | 1-original | 2 | XPLOR/CNS | dihedral angle |
{Normal RNA torsion angle constraints}
REStraints
DIHEdral
reset
{keep amino groups in the plane of the base}
assign (residue 1 and name h22) (residue 1 and name n2)
(residue 1 and name c2) (residue 1 and name n3) 10 0 5 2
assign (residue 2 and name h22) (residue 2 and name n2)
(residue 2 and name c2) (residue 2 and name n3) 10 0 5 2
assign (residue 3 and name h61) (residue 3 and name n6)
(residue 3 and name c6) (residue 3 and name c5) 10 180 5 2
assign (residue 4 and name h42) (residue 4 and name n4)
(residue 4 and name c4) (residue 4 and name c5) 10 0 5 2
assign (residue 6 and name h62) (residue 6 and name n6)
(residue 6 and name c6) (residue 6 and name c5) 10 0 5 2
assign (residue 7 and name h22) (residue 7 and name n2)
(residue 7 and name c2) (residue 7 and name n3) 10 0 5 2
assign (residue 9 and name h42) (residue 9 and name n4)
(residue 9 and name c4) (residue 9 and name c5) 10 0 5 2
assign (residue 10 and name h42) (residue 10 and name n4)
(residue 10 and name c4) (residue 10 and name c5) 10 0 5 2
assign (residue 11 and name h22) (residue 11 and name n2)
(residue 11 and name c2) (residue 11 and name n3) 10 0 5 2
assign (residue 12 and name h22) (residue 12 and name n2)
(residue 12 and name c2) (residue 12 and name n3) 10 0 5 2
assign (residue 13 and name h61) (residue 13 and name n6)
(residue 13 and name c6) (residue 13 and name c5) 10 180 5 2
assign (residue 14 and name h42) (residue 14 and name n4)
(residue 14 and name c4) (residue 14 and name c5) 10 0 5 2
assign (residue 16 and name h62) (residue 16 and name n6)
(residue 16 and name c6) (residue 16 and name c5) 10 0 5 2
assign (residue 17 and name h22) (residue 17 and name n2)
(residue 17 and name c2) (residue 17 and name n3) 10 0 5 2
assign (residue 19 and name h42) (residue 19 and name n4)
(residue 19 and name c4) (residue 19 and name c5) 10 0 5 2
assign (residue 20 and name h42) (residue 20 and name n4)
(residue 20 and name c4) (residue 20 and name c5) 10 0 5 2
{Restrain Specific Nucleotides to 3' endo}
assign (residue 1 and name c4') (residue 1 and name o4')
(residue 1 and name c1') (residue 1 and name c2') 2 0 5 2
assign (residue 1 and name o4') (residue 1 and name c1')
(residue 1 and name c2') (residue 1 and name c3') 2 -22 5 2
assign (residue 1 and name c1') (residue 1 and name c2')
(residue 1 and name c3') (residue 1 and name c4') 2 36 5 2
assign (residue 1 and name c2') (residue 1 and name c3')
(residue 1 and name c4') (residue 1 and name o4') 2 -36 5 2
assign (residue 2 and name c4') (residue 2 and name o4')
(residue 2 and name c1') (residue 2 and name c2') 2 0 5 2
assign (residue 2 and name o4') (residue 2 and name c1')
(residue 2 and name c2') (residue 2 and name c3') 2 -22 5 2
assign (residue 2 and name c1') (residue 2 and name c2')
(residue 2 and name c3') (residue 2 and name c4') 2 36 5 2
assign (residue 2 and name c2') (residue 2 and name c3')
(residue 2 and name c4') (residue 2 and name o4') 2 -36 5 2
assign (residue 3 and name c4') (residue 3 and name o4')
(residue 3 and name c1') (residue 3 and name c2') 2 0 5 2
assign (residue 3 and name o4') (residue 3 and name c1')
(residue 3 and name c2') (residue 3 and name c3') 2 -22 5 2
assign (residue 3 and name c1') (residue 3 and name c2')
(residue 3 and name c3') (residue 3 and name c4') 2 36 5 2
assign (residue 3 and name c2') (residue 3 and name c3')
(residue 3 and name c4') (residue 3 and name o4') 2 -36 5 2
assign (residue 4 and name c4') (residue 4 and name o4')
(residue 4 and name c1') (residue 4 and name c2') 2 0 5 2
assign (residue 4 and name o4') (residue 4 and name c1')
(residue 4 and name c2') (residue 4 and name c3') 2 -22 5 2
assign (residue 4 and name c1') (residue 4 and name c2')
(residue 4 and name c3') (residue 4 and name c4') 2 36 5 2
assign (residue 4 and name c2') (residue 4 and name c3')
(residue 4 and name c4') (residue 4 and name o4') 2 -36 5 2
assign (residue 5 and name c4') (residue 5 and name o4')
(residue 5 and name c1') (residue 5 and name c2') 2 0 5 2
assign (residue 5 and name o4') (residue 5 and name c1')
(residue 5 and name c2') (residue 5 and name c3') 2 -22 5 2
assign (residue 5 and name c1') (residue 5 and name c2')
(residue 5 and name c3') (residue 5 and name c4') 2 36 5 2
assign (residue 5 and name c2') (residue 5 and name c3')
(residue 5 and name c4') (residue 5 and name o4') 2 -36 5 2
assign (residue 6 and name c4') (residue 6 and name o4')
(residue 6 and name c1') (residue 6 and name c2') 2 0 5 2
assign (residue 6 and name o4') (residue 6 and name c1')
(residue 6 and name c2') (residue 6 and name c3') 2 -22 5 2
assign (residue 6 and name c1') (residue 6 and name c2')
(residue 6 and name c3') (residue 6 and name c4') 2 36 5 2
assign (residue 6 and name c2') (residue 6 and name c3')
(residue 6 and name c4') (residue 6 and name o4') 2 -36 5 2
assign (residue 7 and name c4') (residue 7 and name o4')
(residue 7 and name c1') (residue 7 and name c2') 2 0 5 2
assign (residue 7 and name o4') (residue 7 and name c1')
(residue 7 and name c2') (residue 7 and name c3') 2 -22 5 2
assign (residue 7 and name c1') (residue 7 and name c2')
(residue 7 and name c3') (residue 7 and name c4') 2 36 5 2
assign (residue 7 and name c2') (residue 7 and name c3')
(residue 7 and name c4') (residue 7 and name o4') 2 -36 5 2
assign (residue 8 and name c4') (residue 8 and name o4')
(residue 8 and name c1') (residue 8 and name c2') 2 0 5 2
assign (residue 8 and name o4') (residue 8 and name c1')
(residue 8 and name c2') (residue 8 and name c3') 2 -22 5 2
assign (residue 8 and name c1') (residue 8 and name c2')
(residue 8 and name c3') (residue 8 and name c4') 2 36 5 2
assign (residue 8 and name c2') (residue 8 and name c3')
(residue 8 and name c4') (residue 8 and name o4') 2 -36 5 2
assign (residue 9 and name c4') (residue 9 and name o4')
(residue 9 and name c1') (residue 9 and name c2') 2 0 5 2
assign (residue 9 and name o4') (residue 9 and name c1')
(residue 9 and name c2') (residue 9 and name c3') 2 -22 5 2
assign (residue 9 and name c1') (residue 9 and name c2')
(residue 9 and name c3') (residue 9 and name c4') 2 36 5 2
assign (residue 9 and name c2') (residue 9 and name c3')
(residue 9 and name c4') (residue 9 and name o4') 2 -36 5 2
assign (residue 10 and name c4') (residue 10 and name o4')
(residue 10 and name c1') (residue 10 and name c2') 2 0 5 2
assign (residue 10 and name o4') (residue 10 and name c1')
(residue 10 and name c2') (residue 10 and name c3') 2 -22 5 2
assign (residue 10 and name c1') (residue 10 and name c2')
(residue 10 and name c3') (residue 10 and name c4') 2 36 5 2
assign (residue 10 and name c2') (residue 10 and name c3')
(residue 10 and name c4') (residue 10 and name o4') 2 -36 5 2
assign (residue 11 and name c4') (residue 11 and name o4')
(residue 11 and name c1') (residue 11 and name c2') 2 0 5 2
assign (residue 11 and name o4') (residue 11 and name c1')
(residue 11 and name c2') (residue 11 and name c3') 2 -22 5 2
assign (residue 11 and name c1') (residue 11 and name c2')
(residue 11 and name c3') (residue 11 and name c4') 2 36 5 2
assign (residue 11 and name c2') (residue 11 and name c3')
(residue 11 and name c4') (residue 11 and name o4') 2 -36 5 2
assign (residue 12 and name c4') (residue 12 and name o4')
(residue 12 and name c1') (residue 12 and name c2') 2 0 5 2
assign (residue 12 and name o4') (residue 12 and name c1')
(residue 12 and name c2') (residue 12 and name c3') 2 -22 5 2
assign (residue 12 and name c1') (residue 12 and name c2')
(residue 12 and name c3') (residue 12 and name c4') 2 36 5 2
assign (residue 12 and name c2') (residue 12 and name c3')
(residue 12 and name c4') (residue 12 and name o4') 2 -36 5 2
assign (residue 13 and name c4') (residue 13 and name o4')
(residue 13 and name c1') (residue 13 and name c2') 2 0 5 2
assign (residue 13 and name o4') (residue 13 and name c1')
(residue 13 and name c2') (residue 13 and name c3') 2 -22 5 2
assign (residue 13 and name c1') (residue 13 and name c2')
(residue 13 and name c3') (residue 13 and name c4') 2 36 5 2
assign (residue 13 and name c2') (residue 13 and name c3')
(residue 13 and name c4') (residue 13 and name o4') 2 -36 5 2
assign (residue 14 and name c4') (residue 14 and name o4')
(residue 14 and name c1') (residue 14 and name c2') 2 0 5 2
assign (residue 14 and name o4') (residue 14 and name c1')
(residue 14 and name c2') (residue 14 and name c3') 2 -22 5 2
assign (residue 14 and name c1') (residue 14 and name c2')
(residue 14 and name c3') (residue 14 and name c4') 2 36 5 2
assign (residue 14 and name c2') (residue 14 and name c3')
(residue 14 and name c4') (residue 14 and name o4') 2 -36 5 2
assign (residue 15 and name c4') (residue 15 and name o4')
(residue 15 and name c1') (residue 15 and name c2') 2 0 5 2
assign (residue 15 and name o4') (residue 15 and name c1')
(residue 15 and name c2') (residue 15 and name c3') 2 -22 5 2
assign (residue 15 and name c1') (residue 15 and name c2')
(residue 15 and name c3') (residue 15 and name c4') 2 36 5 2
assign (residue 15 and name c2') (residue 15 and name c3')
(residue 15 and name c4') (residue 15 and name o4') 2 -36 5 2
assign (residue 16 and name c4') (residue 16 and name o4')
(residue 16 and name c1') (residue 16 and name c2') 2 0 5 2
assign (residue 16 and name o4') (residue 16 and name c1')
(residue 16 and name c2') (residue 16 and name c3') 2 -22 5 2
assign (residue 16 and name c1') (residue 16 and name c2')
(residue 16 and name c3') (residue 16 and name c4') 2 36 5 2
assign (residue 16 and name c2') (residue 16 and name c3')
(residue 16 and name c4') (residue 16 and name o4') 2 -36 5 2
assign (residue 17 and name c4') (residue 17 and name o4')
(residue 17 and name c1') (residue 17 and name c2') 2 0 5 2
assign (residue 17 and name o4') (residue 17 and name c1')
(residue 17 and name c2') (residue 17 and name c3') 2 -22 5 2
assign (residue 17 and name c1') (residue 17 and name c2')
(residue 17 and name c3') (residue 17 and name c4') 2 36 5 2
assign (residue 17 and name c2') (residue 17 and name c3')
(residue 17 and name c4') (residue 17 and name o4') 2 -36 5 2
assign (residue 18 and name c4') (residue 18 and name o4')
(residue 18 and name c1') (residue 18 and name c2') 2 0 5 2
assign (residue 18 and name o4') (residue 18 and name c1')
(residue 18 and name c2') (residue 18 and name c3') 2 -22 5 2
assign (residue 18 and name c1') (residue 18 and name c2')
(residue 18 and name c3') (residue 18 and name c4') 2 36 5 2
assign (residue 18 and name c2') (residue 18 and name c3')
(residue 18 and name c4') (residue 18 and name o4') 2 -36 5 2
assign (residue 19 and name c4') (residue 19 and name o4')
(residue 19 and name c1') (residue 19 and name c2') 2 0 5 2
assign (residue 19 and name o4') (residue 19 and name c1')
(residue 19 and name c2') (residue 19 and name c3') 2 -22 5 2
assign (residue 19 and name c1') (residue 19 and name c2')
(residue 19 and name c3') (residue 19 and name c4') 2 36 5 2
assign (residue 19 and name c2') (residue 19 and name c3')
(residue 19 and name c4') (residue 19 and name o4') 2 -36 5 2
assign (residue 20 and name c4') (residue 20 and name o4')
(residue 20 and name c1') (residue 20 and name c2') 2 0 5 2
assign (residue 20 and name o4') (residue 20 and name c1')
(residue 20 and name c2') (residue 20 and name c3') 2 -22 5 2
assign (residue 20 and name c1') (residue 20 and name c2')
(residue 20 and name c3') (residue 20 and name c4') 2 36 5 2
assign (residue 20 and name c2') (residue 20 and name c3')
(residue 20 and name c4') (residue 20 and name o4') 2 -36 5 2
{Restrain the glycosidic torsion angle to anti or syn based upon 1'-H6/H8 and 2'-H6/H8 NOE}
assign (residue 1 and name o4') (residue 1 and name c1')
(residue 1 and name n9) (residue 1 and name c4) 2 -110 70 2
assign (residue 2 and name o4') (residue 2 and name c1')
(residue 2 and name n9) (residue 2 and name c4) 2 -110 70 2
assign (residue 3 and name o4') (residue 3 and name c1')
(residue 3 and name n9) (residue 3 and name c4) 2 -110 70 2
assign (residue 4 and name o4') (residue 4 and name c1')
(residue 4 and name n1) (residue 4 and name c2) 2 -110 70 2
assign (residue 5 and name o4') (residue 5 and name c1')
(residue 5 and name n1) (residue 5 and name c2) 2 -110 70 2
assign (residue 6 and name o4') (residue 6 and name c1')
(residue 6 and name n9) (residue 6 and name c4) 2 -110 70 2
assign (residue 7 and name o4') (residue 7 and name c1')
(residue 7 and name n9) (residue 7 and name c4) 2 -130 50 2
assign (residue 8 and name o4') (residue 8 and name c1')
(residue 8 and name n1) (residue 8 and name c2) 2 -110 70 2
assign (residue 9 and name o4') (residue 9 and name c1')
(residue 9 and name n1) (residue 9 and name c2) 2 -110 70 2
assign (residue 10 and name o4') (residue 10 and name c1')
(residue 10 and name n1) (residue 10 and name c2) 2 -110 70 2
assign (residue 11 and name o4') (residue 11 and name c1')
(residue 11 and name n9) (residue 11 and name c4) 2 -110 70 2
assign (residue 12 and name o4') (residue 12 and name c1')
(residue 12 and name n9) (residue 12 and name c4) 2 -110 70 2
assign (residue 13 and name o4') (residue 13 and name c1')
(residue 13 and name n9) (residue 13 and name c4) 2 -110 70 2
assign (residue 14 and name o4') (residue 14 and name c1')
(residue 14 and name n1) (residue 14 and name c2) 2 -110 70 2
assign (residue 15 and name o4') (residue 15 and name c1')
(residue 15 and name n1) (residue 15 and name c2) 2 -110 70 2
assign (residue 16 and name o4') (residue 16 and name c1')
(residue 16 and name n9) (residue 16 and name c4) 2 -110 70 2
assign (residue 17 and name o4') (residue 17 and name c1')
(residue 17 and name n9) (residue 17 and name c4) 2 -130 50 2
assign (residue 18 and name o4') (residue 18 and name c1')
(residue 18 and name n1) (residue 18 and name c2) 2 -110 70 2
assign (residue 19 and name o4') (residue 19 and name c1')
(residue 19 and name n1) (residue 19 and name c2) 2 -110 70 2
assign (residue 20 and name o4') (residue 20 and name c1')
(residue 20 and name n1) (residue 20 and name c2) 2 -110 70 2
{Backbone Torsion Angle Beta}
{Used in Refinement only}
assign (residue 2 and name p) (residue 2 and name o5')
(residue 2 and name c5') (residue 2 and name c4') 2 180 20 2
assign (residue 3 and name p) (residue 3 and name o5')
(residue 3 and name c5') (residue 3 and name c4') 2 180 20 2
assign (residue 4 and name p) (residue 4 and name o5')
(residue 4 and name c5') (residue 4 and name c4') 2 180 20 2
assign (residue 5 and name p) (residue 5 and name o5')
(residue 5 and name c5') (residue 5 and name c4') 2 180 20 2
assign (residue 6 and name p) (residue 6 and name o5')
(residue 6 and name c5') (residue 6 and name c4') 2 180 20 2
assign (residue 7 and name p) (residue 7 and name o5')
(residue 7 and name c5') (residue 7 and name c4') 2 180 20 2
assign (residue 8 and name p) (residue 8 and name o5')
(residue 8 and name c5') (residue 8 and name c4') 2 180 20 2
assign (residue 9 and name p) (residue 9 and name o5')
(residue 9 and name c5') (residue 9 and name c4') 2 180 20 2
assign (residue 10 and name p) (residue 10 and name o5')
(residue 10 and name c5') (residue 10 and name c4') 2 180 20 2
assign (residue 12 and name p) (residue 12 and name o5')
(residue 12 and name c5') (residue 12 and name c4') 2 180 20 2
assign (residue 13 and name p) (residue 13 and name o5')
(residue 13 and name c5') (residue 13 and name c4') 2 180 20 2
assign (residue 14 and name p) (residue 14 and name o5')
(residue 14 and name c5') (residue 14 and name c4') 2 180 20 2
assign (residue 15 and name p) (residue 15 and name o5')
(residue 15 and name c5') (residue 15 and name c4') 2 180 20 2
assign (residue 16 and name p) (residue 16 and name o5')
(residue 16 and name c5') (residue 16 and name c4') 2 180 20 2
assign (residue 17 and name p) (residue 17 and name o5')
(residue 17 and name c5') (residue 17 and name c4') 2 180 20 2
assign (residue 18 and name p) (residue 18 and name o5')
(residue 18 and name c5') (residue 18 and name c4') 2 180 20 2
assign (residue 19 and name p) (residue 19 and name o5')
(residue 19 and name c5') (residue 19 and name c4') 2 180 20 2
assign (residue 20 and name p) (residue 20 and name o5')
(residue 20 and name c5') (residue 20 and name c4') 2 180 20 2
{Backbone Torsion Angle Gamma}
{Used in Refinement Only}
assign (residue 1 and name o5') (residue 1 and name c5')
(residue 1 and name c4') (residue 1 and name c3') 2 55 20 2
assign (residue 2 and name o5') (residue 2 and name c5')
(residue 2 and name c4') (residue 2 and name c3') 2 55 20 2
assign (residue 3 and name o5') (residue 3 and name c5')
(residue 3 and name c4') (residue 3 and name c3') 2 55 20 2
assign (residue 4 and name o5') (residue 4 and name c5')
(residue 4 and name c4') (residue 4 and name c3') 2 55 20 2
assign (residue 5 and name o5') (residue 5 and name c5')
(residue 5 and name c4') (residue 5 and name c3') 2 55 20 2
assign (residue 6 and name o5') (residue 6 and name c5')
(residue 6 and name c4') (residue 6 and name c3') 2 55 20 2
assign (residue 7 and name o5') (residue 7 and name c5')
(residue 7 and name c4') (residue 7 and name c3') 2 55 20 2
assign (residue 8 and name o5') (residue 8 and name c5')
(residue 8 and name c4') (residue 8 and name c3') 2 55 20 2
assign (residue 9 and name o5') (residue 9 and name c5')
(residue 9 and name c4') (residue 9 and name c3') 2 55 20 2
assign (residue 10 and name o5') (residue 10 and name c5')
(residue 10 and name c4') (residue 10 and name c3') 2 55 20 2
assign (residue 11 and name o5') (residue 11 and name c5')
(residue 11 and name c4') (residue 11 and name c3') 2 55 20 2
assign (residue 12 and name o5') (residue 12 and name c5')
(residue 12 and name c4') (residue 12 and name c3') 2 55 20 2
assign (residue 13 and name o5') (residue 13 and name c5')
(residue 13 and name c4') (residue 13 and name c3') 2 55 20 2
assign (residue 14 and name o5') (residue 14 and name c5')
(residue 14 and name c4') (residue 14 and name c3') 2 55 20 2
assign (residue 15 and name o5') (residue 15 and name c5')
(residue 15 and name c4') (residue 15 and name c3') 2 55 20 2
assign (residue 16 and name o5') (residue 16 and name c5')
(residue 16 and name c4') (residue 16 and name c3') 2 180 20 2
assign (residue 17 and name o5') (residue 17 and name c5')
(residue 17 and name c4') (residue 17 and name c3') 2 55 20 2
assign (residue 18 and name o5') (residue 18 and name c5')
(residue 18 and name c4') (residue 18 and name c3') 2 55 20 2
assign (residue 19 and name o5') (residue 19 and name c5')
(residue 19 and name c4') (residue 19 and name c3') 2 55 20 2
assign (residue 20 and name o5') (residue 20 and name c5')
(residue 20 and name c4') (residue 20 and name c3') 2 55 20 2
{Backbone Torsion Angle Epsilon}
{used in refinement only}
assign (residue 1 and name c4') (residue 1 and name c3')
(residue 1 and name o3') (residue 2 and name p) 2 -155 20 2
assign (residue 2 and name c4') (residue 2 and name c3')
(residue 2 and name o3') (residue 3 and name p) 2 -155 20 2
assign (residue 3 and name c4') (residue 3 and name c3')
(residue 3 and name o3') (residue 4 and name p) 2 -155 20 2
assign (residue 4 and name c4') (residue 4 and name c3')
(residue 4 and name o3') (residue 5 and name p) 2 -155 20 2
assign (residue 5 and name c4') (residue 5 and name c3')
(residue 5 and name o3') (residue 6 and name p) 2 -155 20 2
assign (residue 6 and name c4') (residue 6 and name c3')
(residue 6 and name o3') (residue 7 and name p) 2 -155 20 2
assign (residue 7 and name c4') (residue 7 and name c3')
(residue 7 and name o3') (residue 8 and name p) 2 -155 20 2
assign (residue 8 and name c4') (residue 8 and name c3')
(residue 8 and name o3') (residue 9 and name p) 2 -155 20 2
assign (residue 9 and name c4') (residue 9 and name c3')
(residue 9 and name o3') (residue 10 and name p) 2 -155 20 2
assign (residue 11 and name c4') (residue 11 and name c3')
(residue 11 and name o3') (residue 12 and name p) 2 -155 20 2
assign (residue 12 and name c4') (residue 12 and name c3')
(residue 12 and name o3') (residue 13 and name p) 2 -155 20 2
assign (residue 13 and name c4') (residue 13 and name c3')
(residue 13 and name o3') (residue 14 and name p) 2 -155 20 2
assign (residue 14 and name c4') (residue 14 and name c3')
(residue 14 and name o3') (residue 15 and name p) 2 -95 20 2
assign (residue 15 and name c4') (residue 15 and name c3')
(residue 15 and name o3') (residue 16 and name p) 2 -155 20 2
assign (residue 16 and name c4') (residue 16 and name c3')
(residue 16 and name o3') (residue 17 and name p) 2 -155 20 2
assign (residue 17 and name c4') (residue 17 and name c3')
(residue 17 and name o3') (residue 18 and name p) 2 -155 20 2
assign (residue 18 and name c4') (residue 18 and name c3')
(residue 18 and name o3') (residue 19 and name p) 2 -155 20 2
assign (residue 19 and name c4') (residue 19 and name c3')
(residue 19 and name o3') (residue 20 and name p) 2 -155 20 2
end