Result table
| image | mrblock_id | pdb_id | bmrb_id | cing | stage | program | type | subtype | subsubtype |
|
|
576318 | 2m83 RC | 19225 | cing | 4-filtered-FRED | Wattos | check | completeness | distance |
data_2m83
save_NOE_Completeness
_NOE_completeness_stats.Sf_category NOE_completeness_statistics
_NOE_completeness_stats.Model_count 20
_NOE_completeness_stats.Residue_count 139
_NOE_completeness_stats.Total_atom_count 2211
_NOE_completeness_stats.Observable_atom_definition ob_standard
_NOE_completeness_stats.Observable_atom_count 771
_NOE_completeness_stats.Use_intra_residue_restraints no
_NOE_completeness_stats.Redundancy_threshold_pct 5.0
_NOE_completeness_stats.Distance_averaging_power 1.00
_NOE_completeness_stats.Completeness_cutoff 4.00
_NOE_completeness_stats.Completeness_cumulative_pct 49.7
_NOE_completeness_stats.Constraint_unexpanded_count 2673
_NOE_completeness_stats.Constraint_count 2673
_NOE_completeness_stats.Constraint_exp_unfiltered_count 2306
_NOE_completeness_stats.Constraint_exceptional_count 0
_NOE_completeness_stats.Constraint_nonobservable_count 0
_NOE_completeness_stats.Constraint_intraresidue_count 560
_NOE_completeness_stats.Constraint_surplus_count 153
_NOE_completeness_stats.Constraint_observed_count 1960
_NOE_completeness_stats.Constraint_expected_count 2176
_NOE_completeness_stats.Constraint_matched_count 1081
_NOE_completeness_stats.Constraint_unmatched_count 879
_NOE_completeness_stats.Constraint_exp_nonobs_count 1095
_NOE_completeness_stats.Details
;
A detailed methodology description is available at:
http://nmr.cmbi.ru.nl/~jd/wattos/doc/Wattos/Soup/Constraint/dc_completeness.html
Please note that the contributions in ambiguous restraints are considered
separate 'restraints' for the sets defined below.
The cut off for all statistics except those in the by-shell table is
given below by the above tag: _NOE_completeness_stats.Completeness_cutoff
Description of the tags in this list:
* 1 * Administrative tag
* 2 * Administrative tag
* 3 * Administrative tag
* 4 * Number of models
* 5 * Number of residues
* 6 * Number of atoms
* 7 * Standard set name of observable atom definitions
see: Doreleijers et al., J.Biomol.NMR 14, 123-132 (1999).
* 8 * Observable atom(group)s
* 9 * Include intra residue restraints
* 10 * Surplus threshold for determining redundant restraints
* 11 * Power for averaging the distance over models
* 12 * Up to what distance are NOEs expected
* 13 * Cumulative completeness percentage
* 14 * Number of unexpanded restraints in restraint list.
* 15 * Number of restraints in restraint list. Set U
* 16 * Expected restraints based on criteria in list. Set V
Set V differs from set B only if intra residue restraints are analyzed.
* 17 * Exceptional restraints, i.e. with an unknown atom.Set E
* 18 * Not observable NOEs with e.g. hydroxyl Ser HG. Set O
Even though restraints with these atom types might have been observed they are
excluded from the analysis.
* 19 * Intra-residue restraints if not to be analyzed. Set I
* 20 * Surplus like double restraints. Set S
* 21 * Observed restraints. Set A = U - (E u O u I u S)
* 22 * Expected restraints based on criteria as in A. Set B = V - (I u S)
* 23 * Observed restraints matched to the expected. Set M = A n B
* 24 * Observed restraints that were not expected. Set C = A - M
* 25 * Expected restraints that were not observed. Set D = B - M
* 26 * This tag
Description of the tags in the class table:
* 1 * Class of restraint. Note that 'medium-range' involves (2<=i<=4) contacts.
Possible values are: intraresidue,sequential,medium-range,long-range, and intermolecular.
* 2 * Observed restraints. Set A = U - (E u O u I u S)
* 3 * Expected restraints based on criteria as in A. Set B = V - (I u S)
* 4 * Observed restraints matched to the expected. Set M = A n B
* 5 * Completeness percentage
* 6 * Standard deviation from the average over the classes.
* 7 * Extra information
* 8 * Administrative tag
* 9 * Administrative tag
Description of the tags in the shell table.
The first row shows the lower limit of the shells requested and
The last row shows the total number of restraints over the shells.
* 1 * Description of the content of the row: edges, shell, or sums.
The value determines the meaning of the values to the nine 'Matched_shell_x' tags among others.
* 2 * Lower limit of shell of expected restraints.
* 3 * Upper limit of shell of expected restraints.
* 4 * Expected restraints based on criteria as in A. Set B = V - (I u S)
* 5 * Observed restraints matched to the expected. Set M = A n B
* 6 * Matched restraints with experimental distance in shell 1
* 7 * Matched restraints with experimental distance in shell 2
* 8 * Matched restraints with experimental distance in shell 3
* 9 * Matched restraints with experimental distance in shell 4
* 10 * Matched restraints with experimental distance in shell 5
* 11 * Matched restraints with experimental distance in shell 6
* 12 * Matched restraints with experimental distance in shell 7
* 13 * Matched restraints with experimental distance in shell 8
* 14 * Matched restraints with experimental distance in shell 9
* 15 * Matched restraints overflowing the last shell
* 16 * Completeness percentage for this shell
* 17 * Completeness percentage up to upper limit of this shell
* 18 * Administrative tag
* 19 * Administrative tag
Description of the tags in the residue table:
* 1 * Chain identifier
* 2 * Residue number
* 3 * Residue name
* 4 * Observable atom(group)s for this residue.
* 5 * Observed restraints. Set A = U - (E u O u I u S)
* 6 * Expected restraints based on criteria as in A. Set B = V - (I u S)
* 7 * Observed restraints matched to the expected. Set M = A n B
* 8 * Completeness percentage
* 9 * Standard deviation from the average over the residues.
* 10 * Extra information
* 11 * Administrative tag
* 12 * Administrative tag
;
loop_
_NOE_completeness_class.Type
_NOE_completeness_class.Constraint_observed_count
_NOE_completeness_class.Constraint_expected_count
_NOE_completeness_class.Constraint_matched_count
_NOE_completeness_class.Completeness_cumulative_pct
_NOE_completeness_class.Std_dev
_NOE_completeness_class.Details
intraresidue 0 0 0 . . "no intras"
sequential 687 578 367 63.5 1.0 >sigma
medium-range 300 346 148 42.8 -0.6 .
long-range 973 1252 566 45.2 -0.4 .
intermolecular 0 0 0 . . "no multimer"
stop_
loop_
_NOE_completeness_shell.Type
_NOE_completeness_shell.Shell_start
_NOE_completeness_shell.Shell_end
_NOE_completeness_shell.Constraint_expected_count
_NOE_completeness_shell.Constraint_matched_count
_NOE_completeness_shell.Matched_shell_1
_NOE_completeness_shell.Matched_shell_2
_NOE_completeness_shell.Matched_shell_3
_NOE_completeness_shell.Matched_shell_4
_NOE_completeness_shell.Matched_shell_5
_NOE_completeness_shell.Matched_shell_6
_NOE_completeness_shell.Matched_shell_7
_NOE_completeness_shell.Matched_shell_8
_NOE_completeness_shell.Matched_shell_9
_NOE_completeness_shell.Matched_shell_overflow
_NOE_completeness_shell.Completeness_shell_pct
_NOE_completeness_shell.Completeness_cumulative_pct
edges . . . . 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 . . . .
shell 0.00 2.00 23 19 0 7 6 4 1 1 0 0 . 0 82.6 82.6
shell 2.00 2.50 250 184 4 66 51 38 18 4 1 2 . 0 73.6 74.4
shell 2.50 3.00 386 228 0 18 69 68 34 19 14 6 . 0 59.1 65.4
shell 3.00 3.50 598 303 0 3 26 102 79 57 26 10 . 0 50.7 58.4
shell 3.50 4.00 919 347 0 0 3 55 112 79 71 27 . 0 37.8 49.7
shell 4.00 4.50 1435 412 0 1 0 10 89 162 101 49 . 0 28.7 41.3
shell 4.50 5.00 1923 252 0 0 0 2 4 67 104 75 . 0 13.1 31.5
shell 5.00 5.50 2392 173 0 0 0 0 2 8 65 98 . 0 7.2 24.2
shell 5.50 6.00 2619 38 0 0 0 0 0 2 17 19 . 0 1.5 18.5
shell 6.00 6.50 2981 4 0 0 0 0 0 0 3 1 . 0 0.1 14.5
shell 6.50 7.00 3274 0 0 0 0 0 0 0 0 0 . 0 0.0 11.7
shell 7.00 7.50 3570 0 0 0 0 0 0 0 0 0 . 0 0.0 9.6
shell 7.50 8.00 3951 0 0 0 0 0 0 0 0 0 . 0 0.0 8.1
shell 8.00 8.50 4136 0 0 0 0 0 0 0 0 0 . 0 0.0 6.9
shell 8.50 9.00 4624 0 0 0 0 0 0 0 0 0 . 0 0.0 5.9
sums . . 33081 1960 4 95 155 279 339 399 402 287 . 0 . .
stop_
loop_
_NOE_completeness_comp.Entity_assembly_ID
_NOE_completeness_comp.Comp_index_ID
_NOE_completeness_comp.Comp_ID
_NOE_completeness_comp.Obs_atom_count
_NOE_completeness_comp.Constraint_observed_count
_NOE_completeness_comp.Constraint_expected_count
_NOE_completeness_comp.Constraint_matched_count
_NOE_completeness_comp.Completeness_cumulative_pct
_NOE_completeness_comp.Std_dev
_NOE_completeness_comp.Details
1 1 GLY 3 0 2 0 0.0 -2.7 >sigma
1 2 HIS 6 0 5 0 0.0 -2.7 >sigma
1 3 MET 6 0 7 0 0.0 -2.7 >sigma
1 4 GLN 7 2 9 2 22.2 -1.5 >sigma
1 5 THR 4 5 8 5 62.5 0.6 .
1 6 GLU 5 6 9 5 55.6 0.3 .
1 7 GLU 5 10 14 4 28.6 -1.2 >sigma
1 8 TYR 6 18 28 10 35.7 -0.8 .
1 9 VAL 5 27 27 15 55.6 0.3 .
1 10 LEU 7 41 62 24 38.7 -0.6 .
1 11 SER 4 20 17 11 64.7 0.8 .
1 12 PRO 5 5 28 0 0.0 -2.7 >sigma
1 13 LEU 7 25 23 9 39.1 -0.6 .
1 14 PHE 7 51 65 32 49.2 -0.1 .
1 15 ASP 4 13 10 7 70.0 1.0 >sigma
1 16 LEU 7 24 38 15 39.5 -0.6 .
1 17 PRO 5 30 44 19 43.2 -0.4 .
1 18 ALA 3 19 9 6 66.7 0.9 .
1 19 SER 4 24 23 15 65.2 0.8 .
1 20 LYS 7 19 18 13 72.2 1.2 >sigma
1 21 GLU 5 16 22 12 54.5 0.2 .
1 22 ASP 4 29 27 19 70.4 1.1 >sigma
1 23 LEU 7 36 68 21 30.9 -1.1 >sigma
1 24 MET 6 30 31 17 54.8 0.2 .
1 25 GLN 7 14 17 6 35.3 -0.8 .
1 26 GLN 7 30 39 15 38.5 -0.7 .
1 27 LEU 7 69 71 30 42.3 -0.5 .
1 28 GLN 7 32 25 13 52.0 0.1 .
1 29 VAL 5 34 26 18 69.2 1.0 >sigma
1 30 GLN 7 33 41 15 36.6 -0.8 .
1 31 LYS 7 47 73 26 35.6 -0.8 .
1 32 ALA 3 37 37 23 62.2 0.6 .
1 33 MET 6 25 44 14 31.8 -1.0 >sigma
1 34 LEU 7 39 66 26 39.4 -0.6 .
1 35 GLU 5 25 36 20 55.6 0.3 .
1 36 SER 4 17 20 11 55.0 0.2 .
1 37 THR 4 31 36 16 44.4 -0.3 .
1 38 GLU 5 14 16 9 56.3 0.3 .
1 39 TYR 6 44 55 22 40.0 -0.6 .
1 40 VAL 5 26 31 16 51.6 0.1 .
1 41 PRO 5 7 7 5 71.4 1.1 >sigma
1 42 GLY 3 4 5 2 40.0 -0.6 .
1 43 SER 4 11 13 7 53.8 0.2 .
1 44 THR 4 17 22 9 40.9 -0.5 .
1 45 SER 4 29 26 13 50.0 -0.0 .
1 46 MET 6 23 60 13 21.7 -1.6 >sigma
1 47 LYS 7 29 30 14 46.7 -0.2 .
1 48 GLY 3 23 27 12 44.4 -0.3 .
1 49 ILE 6 44 52 28 53.8 0.2 .
1 50 ILE 6 62 69 33 47.8 -0.2 .
1 51 ARG 7 32 57 24 42.1 -0.5 .
1 52 VAL 5 61 55 40 72.7 1.2 >sigma
1 53 LEU 7 43 62 26 41.9 -0.5 .
1 54 ASN 6 36 23 16 69.6 1.0 >sigma
1 55 ILE 6 32 44 17 38.6 -0.6 .
1 56 SER 4 31 30 21 70.0 1.0 >sigma
1 57 PHE 7 10 13 7 53.8 0.2 .
1 58 GLU 5 14 13 8 61.5 0.6 .
1 59 LYS 7 41 49 25 51.0 0.0 .
1 60 LEU 7 35 30 16 53.3 0.1 .
1 61 VAL 5 66 57 42 73.7 1.2 >sigma
1 62 TYR 6 58 48 24 50.0 -0.0 .
1 63 VAL 5 67 61 36 59.0 0.5 .
1 64 ARG 7 35 51 16 31.4 -1.0 >sigma
1 65 MET 6 49 47 26 55.3 0.3 .
1 66 SER 4 31 26 18 69.2 1.0 >sigma
1 67 LEU 7 16 26 9 34.6 -0.9 .
1 68 ASP 4 12 18 7 38.9 -0.6 .
1 69 ASP 4 15 12 8 66.7 0.9 .
1 70 TRP 10 49 44 24 54.5 0.2 .
1 71 GLN 7 23 17 12 70.6 1.1 >sigma
1 72 THR 4 17 22 9 40.9 -0.5 .
1 73 HIS 6 23 21 9 42.9 -0.4 .
1 74 TYR 6 42 38 21 55.3 0.3 .
1 75 ASP 4 26 20 13 65.0 0.8 .
1 76 ILE 6 53 45 32 71.1 1.1 >sigma
1 77 LEU 7 29 24 13 54.2 0.2 .
1 78 ALA 3 42 34 26 76.5 1.4 >sigma
1 79 GLU 5 17 12 7 58.3 0.4 .
1 80 TYR 6 44 32 23 71.9 1.2 >sigma
1 81 VAL 5 42 29 16 55.2 0.2 .
1 82 PRO 5 15 13 9 69.2 1.0 >sigma
1 83 ASN 6 17 9 8 88.9 2.1 >sigma
1 84 SER 4 26 19 14 73.7 1.2 >sigma
1 85 CYS 4 27 16 12 75.0 1.3 >sigma
1 86 ASP 4 13 7 5 71.4 1.1 >sigma
1 87 GLY 3 20 8 7 87.5 2.0 >sigma
1 88 GLU 5 21 17 12 70.6 1.1 >sigma
1 89 THR 4 43 35 24 68.6 1.0 .
1 90 ASP 4 37 33 21 63.6 0.7 .
1 91 GLN 7 41 45 23 51.1 0.0 .
1 92 PHE 7 90 67 55 82.1 1.7 >sigma
1 93 SER 4 47 34 26 76.5 1.4 >sigma
1 94 PHE 7 26 69 17 24.6 -1.4 >sigma
1 95 LYS 7 19 21 13 61.9 0.6 .
1 96 ILE 6 42 55 24 43.6 -0.4 .
1 97 SER 4 16 13 11 84.6 1.8 >sigma
1 98 LEU 7 22 25 8 32.0 -1.0 >sigma
1 99 VAL 5 15 51 10 19.6 -1.7 >sigma
1 100 PRO 5 18 48 9 18.8 -1.7 >sigma
1 101 PRO 5 15 31 11 35.5 -0.8 .
1 102 TYR 6 23 29 13 44.8 -0.3 .
1 103 GLN 7 9 19 6 31.6 -1.0 >sigma
1 104 LYS 7 7 14 4 28.6 -1.2 >sigma
1 105 ASP 4 5 11 4 36.4 -0.8 .
1 106 GLY 3 8 13 6 46.2 -0.2 .
1 107 SER 4 16 17 7 41.2 -0.5 .
1 108 LYS 7 27 28 13 46.4 -0.2 .
1 109 VAL 5 28 48 19 39.6 -0.6 .
1 110 GLU 5 38 29 20 69.0 1.0 .
1 111 PHE 7 69 74 43 58.1 0.4 .
1 112 CYS 4 31 25 15 60.0 0.5 .
1 113 ILE 6 49 68 29 42.6 -0.4 .
1 114 ARG 7 46 47 23 48.9 -0.1 .
1 115 TYR 6 89 69 55 79.7 1.6 >sigma
1 116 GLU 5 36 27 18 66.7 0.9 .
1 117 THR 4 39 34 25 73.5 1.2 >sigma
1 118 SER 4 11 14 7 50.0 -0.0 .
1 119 VAL 5 21 24 13 54.2 0.2 .
1 120 GLY 3 21 8 7 87.5 2.0 >sigma
1 121 THR 4 35 22 16 72.7 1.2 >sigma
1 122 PHE 7 24 47 13 27.7 -1.2 >sigma
1 123 TRP 10 36 36 19 52.8 0.1 .
1 124 SER 4 26 23 14 60.9 0.6 .
1 125 ASN 6 3 7 1 14.3 -2.0 >sigma
1 126 ASN 6 10 23 5 21.7 -1.6 >sigma
1 127 ASN 6 6 9 2 22.2 -1.5 >sigma
1 128 GLY 3 8 8 5 62.5 0.6 .
1 129 THR 4 14 17 6 35.3 -0.8 .
1 130 ASN 6 12 28 7 25.0 -1.4 >sigma
1 131 TYR 6 42 56 29 51.8 0.1 .
1 132 THR 4 34 28 16 57.1 0.4 .
1 133 LEU 7 55 54 27 50.0 -0.0 .
1 134 VAL 5 36 35 16 45.7 -0.3 .
1 135 CYS 4 30 25 17 68.0 0.9 .
1 136 GLN 7 30 25 13 52.0 0.1 .
1 137 LYS 7 34 43 18 41.9 -0.5 .
1 138 LYS 7 27 37 18 48.6 -0.1 .
1 139 GLU 5 8 17 6 35.3 -0.8 .
stop_
save_