Result table
| image | mrblock_id | pdb_id | bmrb_id | cing | stage | program | type | subtype | subsubtype |
|
|
551570 | 2ln7 RC | 18152 | cing | 4-filtered-FRED | Wattos | check | completeness | distance |
data_2ln7
save_NOE_Completeness
_NOE_completeness_stats.Sf_category NOE_completeness_statistics
_NOE_completeness_stats.Model_count 20
_NOE_completeness_stats.Residue_count 147
_NOE_completeness_stats.Total_atom_count 2325
_NOE_completeness_stats.Observable_atom_definition ob_standard
_NOE_completeness_stats.Observable_atom_count 794
_NOE_completeness_stats.Use_intra_residue_restraints no
_NOE_completeness_stats.Redundancy_threshold_pct 5.0
_NOE_completeness_stats.Distance_averaging_power 1.00
_NOE_completeness_stats.Completeness_cutoff 4.00
_NOE_completeness_stats.Completeness_cumulative_pct 48.6
_NOE_completeness_stats.Constraint_unexpanded_count 2425
_NOE_completeness_stats.Constraint_count 2425
_NOE_completeness_stats.Constraint_exp_unfiltered_count 2129
_NOE_completeness_stats.Constraint_exceptional_count 0
_NOE_completeness_stats.Constraint_nonobservable_count 0
_NOE_completeness_stats.Constraint_intraresidue_count 441
_NOE_completeness_stats.Constraint_surplus_count 169
_NOE_completeness_stats.Constraint_observed_count 1815
_NOE_completeness_stats.Constraint_expected_count 1991
_NOE_completeness_stats.Constraint_matched_count 967
_NOE_completeness_stats.Constraint_unmatched_count 848
_NOE_completeness_stats.Constraint_exp_nonobs_count 1024
_NOE_completeness_stats.Details
;
A detailed methodology description is available at:
http://nmr.cmbi.ru.nl/~jd/wattos/doc/Wattos/Soup/Constraint/dc_completeness.html
Please note that the contributions in ambiguous restraints are considered
separate 'restraints' for the sets defined below.
The cut off for all statistics except those in the by-shell table is
given below by the above tag: _NOE_completeness_stats.Completeness_cutoff
Description of the tags in this list:
* 1 * Administrative tag
* 2 * Administrative tag
* 3 * Administrative tag
* 4 * Number of models
* 5 * Number of residues
* 6 * Number of atoms
* 7 * Standard set name of observable atom definitions
see: Doreleijers et al., J.Biomol.NMR 14, 123-132 (1999).
* 8 * Observable atom(group)s
* 9 * Include intra residue restraints
* 10 * Surplus threshold for determining redundant restraints
* 11 * Power for averaging the distance over models
* 12 * Up to what distance are NOEs expected
* 13 * Cumulative completeness percentage
* 14 * Number of unexpanded restraints in restraint list.
* 15 * Number of restraints in restraint list. Set U
* 16 * Expected restraints based on criteria in list. Set V
Set V differs from set B only if intra residue restraints are analyzed.
* 17 * Exceptional restraints, i.e. with an unknown atom.Set E
* 18 * Not observable NOEs with e.g. hydroxyl Ser HG. Set O
Even though restraints with these atom types might have been observed they are
excluded from the analysis.
* 19 * Intra-residue restraints if not to be analyzed. Set I
* 20 * Surplus like double restraints. Set S
* 21 * Observed restraints. Set A = U - (E u O u I u S)
* 22 * Expected restraints based on criteria as in A. Set B = V - (I u S)
* 23 * Observed restraints matched to the expected. Set M = A n B
* 24 * Observed restraints that were not expected. Set C = A - M
* 25 * Expected restraints that were not observed. Set D = B - M
* 26 * This tag
Description of the tags in the class table:
* 1 * Class of restraint. Note that 'medium-range' involves (2<=i<=4) contacts.
Possible values are: intraresidue,sequential,medium-range,long-range, and intermolecular.
* 2 * Observed restraints. Set A = U - (E u O u I u S)
* 3 * Expected restraints based on criteria as in A. Set B = V - (I u S)
* 4 * Observed restraints matched to the expected. Set M = A n B
* 5 * Completeness percentage
* 6 * Standard deviation from the average over the classes.
* 7 * Extra information
* 8 * Administrative tag
* 9 * Administrative tag
Description of the tags in the shell table.
The first row shows the lower limit of the shells requested and
The last row shows the total number of restraints over the shells.
* 1 * Description of the content of the row: edges, shell, or sums.
The value determines the meaning of the values to the nine 'Matched_shell_x' tags among others.
* 2 * Lower limit of shell of expected restraints.
* 3 * Upper limit of shell of expected restraints.
* 4 * Expected restraints based on criteria as in A. Set B = V - (I u S)
* 5 * Observed restraints matched to the expected. Set M = A n B
* 6 * Matched restraints with experimental distance in shell 1
* 7 * Matched restraints with experimental distance in shell 2
* 8 * Matched restraints with experimental distance in shell 3
* 9 * Matched restraints with experimental distance in shell 4
* 10 * Matched restraints with experimental distance in shell 5
* 11 * Matched restraints with experimental distance in shell 6
* 12 * Matched restraints with experimental distance in shell 7
* 13 * Matched restraints with experimental distance in shell 8
* 14 * Matched restraints with experimental distance in shell 9
* 15 * Matched restraints overflowing the last shell
* 16 * Completeness percentage for this shell
* 17 * Completeness percentage up to upper limit of this shell
* 18 * Administrative tag
* 19 * Administrative tag
Description of the tags in the residue table:
* 1 * Chain identifier
* 2 * Residue number
* 3 * Residue name
* 4 * Observable atom(group)s for this residue.
* 5 * Observed restraints. Set A = U - (E u O u I u S)
* 6 * Expected restraints based on criteria as in A. Set B = V - (I u S)
* 7 * Observed restraints matched to the expected. Set M = A n B
* 8 * Completeness percentage
* 9 * Standard deviation from the average over the residues.
* 10 * Extra information
* 11 * Administrative tag
* 12 * Administrative tag
;
loop_
_NOE_completeness_class.Type
_NOE_completeness_class.Constraint_observed_count
_NOE_completeness_class.Constraint_expected_count
_NOE_completeness_class.Constraint_matched_count
_NOE_completeness_class.Completeness_cumulative_pct
_NOE_completeness_class.Std_dev
_NOE_completeness_class.Details
intraresidue 0 0 0 . . "no intras"
sequential 612 590 303 51.4 0.7 .
medium-range 274 319 136 42.6 -1.0 .
long-range 929 1082 528 48.8 0.2 .
intermolecular 0 0 0 . . "no multimer"
stop_
loop_
_NOE_completeness_shell.Type
_NOE_completeness_shell.Shell_start
_NOE_completeness_shell.Shell_end
_NOE_completeness_shell.Constraint_expected_count
_NOE_completeness_shell.Constraint_matched_count
_NOE_completeness_shell.Matched_shell_1
_NOE_completeness_shell.Matched_shell_2
_NOE_completeness_shell.Matched_shell_3
_NOE_completeness_shell.Matched_shell_4
_NOE_completeness_shell.Matched_shell_5
_NOE_completeness_shell.Matched_shell_6
_NOE_completeness_shell.Matched_shell_7
_NOE_completeness_shell.Matched_shell_8
_NOE_completeness_shell.Matched_shell_9
_NOE_completeness_shell.Matched_shell_overflow
_NOE_completeness_shell.Completeness_shell_pct
_NOE_completeness_shell.Completeness_cumulative_pct
edges . . . . 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 . . . .
shell 0.00 2.00 17 13 0 2 7 3 0 1 0 0 . 0 76.5 76.5
shell 2.00 2.50 260 178 1 10 77 45 31 8 4 2 . 0 68.5 69.0
shell 2.50 3.00 330 201 1 5 31 72 46 27 12 7 . 0 60.9 64.6
shell 3.00 3.50 520 236 0 3 33 47 73 43 27 10 . 0 45.4 55.7
shell 3.50 4.00 864 339 0 0 7 56 95 101 48 32 . 0 39.2 48.6
shell 4.00 4.50 1352 405 0 0 1 18 86 125 122 53 . 0 30.0 41.0
shell 4.50 5.00 1866 282 0 0 0 1 14 81 106 80 . 0 15.1 31.8
shell 5.00 5.50 2106 128 0 0 0 0 3 13 55 57 . 0 6.1 24.4
shell 5.50 6.00 2503 30 0 0 0 0 0 2 13 15 . 0 1.2 18.5
shell 6.00 6.50 2763 3 0 0 0 0 0 0 3 0 . 0 0.1 14.4
shell 6.50 7.00 3228 0 0 0 0 0 0 0 0 0 . 0 0.0 11.5
shell 7.00 7.50 3355 0 0 0 0 0 0 0 0 0 . 0 0.0 9.5
shell 7.50 8.00 3891 0 0 0 0 0 0 0 0 0 . 0 0.0 7.9
shell 8.00 8.50 4117 0 0 0 0 0 0 0 0 0 . 0 0.0 6.7
shell 8.50 9.00 4338 0 0 0 0 0 0 0 0 0 . 0 0.0 5.8
sums . . 31510 1815 2 20 156 242 348 401 390 256 . 0 . .
stop_
loop_
_NOE_completeness_comp.Entity_assembly_ID
_NOE_completeness_comp.Comp_index_ID
_NOE_completeness_comp.Comp_ID
_NOE_completeness_comp.Obs_atom_count
_NOE_completeness_comp.Constraint_observed_count
_NOE_completeness_comp.Constraint_expected_count
_NOE_completeness_comp.Constraint_matched_count
_NOE_completeness_comp.Completeness_cumulative_pct
_NOE_completeness_comp.Std_dev
_NOE_completeness_comp.Details
1 1 GLY 3 0 2 0 0.0 -1.7 >sigma
1 2 SER 4 0 6 0 0.0 -1.7 >sigma
1 3 HIS 6 0 8 0 0.0 -1.7 >sigma
1 4 MET 6 0 8 0 0.0 -1.7 >sigma
1 5 SER 4 0 8 0 0.0 -1.7 >sigma
1 6 SER 4 0 7 0 0.0 -1.7 >sigma
1 7 GLN 7 0 8 0 0.0 -1.7 >sigma
1 8 THR 4 4 9 3 33.3 -0.4 .
1 9 GLU 5 10 9 8 88.9 1.8 >sigma
1 10 HIS 6 13 9 6 66.7 0.9 .
1 11 LYS 7 15 12 8 66.7 0.9 .
1 12 GLU 5 32 21 17 81.0 1.5 >sigma
1 13 GLY 3 14 14 6 42.9 -0.0 .
1 14 GLU 5 30 22 15 68.2 1.0 .
1 15 LYS 7 36 41 27 65.9 0.9 .
1 16 VAL 5 44 37 26 70.3 1.1 >sigma
1 17 ALA 3 19 30 12 40.0 -0.1 .
1 18 MET 6 20 35 16 45.7 0.1 .
1 19 LEU 7 39 61 22 36.1 -0.3 .
1 20 ASN 6 26 24 13 54.2 0.4 .
1 21 ILE 6 50 58 30 51.7 0.3 .
1 22 PRO 5 23 28 17 60.7 0.7 .
1 23 LYS 7 24 50 19 38.0 -0.2 .
1 24 LEU 7 38 57 26 45.6 0.1 .
1 25 LYS 7 20 14 10 71.4 1.1 >sigma
1 26 LYS 7 28 39 17 43.6 0.0 .
1 27 LYS 7 24 26 10 38.5 -0.2 .
1 28 PHE 7 36 42 17 40.5 -0.1 .
1 29 SER 4 21 24 15 62.5 0.8 .
1 30 ILE 6 32 57 22 38.6 -0.2 .
1 31 TYR 6 45 38 26 68.4 1.0 .
1 32 TRP 10 81 56 44 78.6 1.4 >sigma
1 33 GLY 3 23 21 15 71.4 1.1 >sigma
1 34 ALA 3 14 16 5 31.3 -0.5 .
1 35 ASP 4 8 12 3 25.0 -0.7 .
1 36 ASP 4 5 6 3 50.0 0.3 .
1 37 ALA 3 6 12 3 25.0 -0.7 .
1 38 THR 4 1 12 0 0.0 -1.7 >sigma
1 39 LEU 7 0 7 0 0.0 -1.7 >sigma
1 40 LYS 7 0 9 0 0.0 -1.7 >sigma
1 41 LYS 7 0 11 0 0.0 -1.7 >sigma
1 42 GLY 3 0 10 0 0.0 -1.7 >sigma
1 43 VAL 5 0 26 0 0.0 -1.7 >sigma
1 44 GLY 3 2 14 1 7.1 -1.4 >sigma
1 45 MET 6 26 51 18 35.3 -0.3 .
1 46 PHE 7 60 40 33 82.5 1.5 >sigma
1 47 VAL 5 46 25 21 84.0 1.6 >sigma
1 48 SER 4 21 24 16 66.7 0.9 .
1 49 ASP 4 8 10 6 60.0 0.7 .
1 50 VAL 5 48 43 32 74.4 1.2 >sigma
1 51 THR 4 46 35 25 71.4 1.1 >sigma
1 52 THR 4 21 17 12 70.6 1.1 >sigma
1 53 THR 4 30 23 16 69.6 1.0 >sigma
1 54 PRO 5 28 29 10 34.5 -0.4 .
1 55 SER 4 16 6 2 33.3 -0.4 .
1 56 GLY 3 7 9 2 22.2 -0.8 .
1 57 GLY 3 13 21 7 33.3 -0.4 .
1 58 GLY 3 20 12 5 41.7 -0.1 .
1 59 HIS 6 78 43 33 76.7 1.3 >sigma
1 60 THR 4 39 36 20 55.6 0.5 .
1 61 VAL 5 67 54 36 66.7 0.9 .
1 62 LEU 7 38 65 25 38.5 -0.2 .
1 63 SER 4 26 16 11 68.8 1.0 .
1 64 GLY 3 10 12 5 41.7 -0.1 .
1 65 HIS 6 0 9 0 0.0 -1.7 >sigma
1 66 ARG 7 0 11 0 0.0 -1.7 >sigma
1 67 ASP 4 0 8 0 0.0 -1.7 >sigma
1 68 THR 4 0 8 0 0.0 -1.7 >sigma
1 69 VAL 5 0 9 0 0.0 -1.7 >sigma
1 70 PHE 7 0 11 0 0.0 -1.7 >sigma
1 71 THR 4 0 19 0 0.0 -1.7 >sigma
1 72 ASP 4 0 12 0 0.0 -1.7 >sigma
1 73 LEU 7 3 12 1 8.3 -1.4 >sigma
1 74 GLY 3 11 21 2 9.5 -1.3 >sigma
1 75 GLN 7 16 18 5 27.8 -0.6 .
1 76 LEU 7 20 32 5 15.6 -1.1 >sigma
1 77 LYS 7 18 62 9 14.5 -1.1 >sigma
1 78 GLU 5 23 18 11 61.1 0.7 .
1 79 LYS 7 16 23 7 30.4 -0.5 .
1 80 ASP 4 30 34 16 47.1 0.1 .
1 81 THR 4 28 31 16 51.6 0.3 .
1 82 LEU 7 37 57 16 28.1 -0.6 .
1 83 VAL 5 36 39 19 48.7 0.2 .
1 84 LEU 7 57 55 28 50.9 0.3 .
1 85 GLU 5 33 25 15 60.0 0.7 .
1 86 TYR 6 46 36 21 58.3 0.6 .
1 87 ASP 4 17 18 7 38.9 -0.2 .
1 88 ASN 6 9 8 4 50.0 0.3 .
1 89 LYS 7 37 34 23 67.6 1.0 .
1 90 THR 4 40 29 17 58.6 0.6 .
1 91 TYR 6 64 52 29 55.8 0.5 .
1 92 THR 4 36 28 19 67.9 1.0 .
1 93 TYR 6 90 73 48 65.8 0.9 .
1 94 GLU 5 43 28 21 75.0 1.2 >sigma
1 95 ILE 6 54 60 26 43.3 -0.0 .
1 96 GLN 7 29 34 17 50.0 0.3 .
1 97 LYS 7 22 27 16 59.3 0.6 .
1 98 ILE 6 46 50 23 46.0 0.1 .
1 99 TRP 10 44 50 25 50.0 0.3 .
1 100 ILE 6 45 33 24 72.7 1.2 >sigma
1 101 THR 4 41 32 23 71.9 1.1 >sigma
1 102 HIS 6 26 16 10 62.5 0.8 .
1 103 ALA 3 23 21 9 42.9 -0.0 .
1 104 ASP 4 7 9 5 55.6 0.5 .
1 105 ASP 4 20 19 11 57.9 0.6 .
1 106 ARG 7 15 19 7 36.8 -0.3 .
1 107 THR 4 23 19 11 57.9 0.6 .
1 108 VAL 5 39 47 23 48.9 0.2 .
1 109 ILE 6 52 49 29 59.2 0.6 .
1 110 ILE 6 36 39 23 59.0 0.6 .
1 111 LYS 7 30 30 22 73.3 1.2 >sigma
1 112 LYS 7 37 51 19 37.3 -0.2 .
1 113 GLU 5 12 10 5 50.0 0.3 .
1 114 GLU 5 19 22 12 54.5 0.4 .
1 115 PRO 5 42 37 22 59.5 0.6 .
1 116 ILE 6 49 55 26 47.3 0.2 .
1 117 LEU 7 48 64 32 50.0 0.3 .
1 118 THR 4 42 37 24 64.9 0.8 .
1 119 LEU 7 38 51 24 47.1 0.1 .
1 120 THR 4 39 37 22 59.5 0.6 .
1 121 THR 4 31 24 12 50.0 0.3 .
1 122 CYS 4 0 19 0 0.0 -1.7 >sigma
1 123 TYR 6 13 21 3 14.3 -1.2 >sigma
1 124 PRO 5 0 12 0 0.0 -1.7 >sigma
1 125 PHE 7 5 12 3 25.0 -0.7 .
1 126 ASP 4 7 13 4 30.8 -0.5 .
1 127 TYR 6 24 22 12 54.5 0.4 .
1 128 ILE 6 10 9 6 66.7 0.9 .
1 129 GLY 3 13 7 5 71.4 1.1 >sigma
1 130 ASP 4 4 7 3 42.9 -0.0 .
1 131 ALA 3 18 20 9 45.0 0.1 .
1 132 PRO 5 0 8 0 0.0 -1.7 >sigma
1 133 ASP 4 11 14 5 35.7 -0.3 .
1 134 ARG 7 16 35 7 20.0 -0.9 .
1 135 TYR 6 46 36 17 47.2 0.1 .
1 136 ILE 6 64 67 36 53.7 0.4 .
1 137 ILE 6 36 62 21 33.9 -0.4 .
1 138 GLU 5 33 37 16 43.2 -0.0 .
1 139 ALA 3 35 35 22 62.9 0.8 .
1 140 LYS 7 39 38 19 50.0 0.3 .
1 141 LEU 7 67 62 39 62.9 0.8 .
1 142 THR 4 37 21 15 71.4 1.1 >sigma
1 143 GLY 3 23 16 9 56.3 0.5 .
1 144 SER 4 29 18 16 88.9 1.8 >sigma
1 145 TYR 6 30 22 14 63.6 0.8 .
1 146 SER 4 16 15 11 73.3 1.2 >sigma
1 147 LYS 7 4 5 4 80.0 1.4 >sigma
stop_
save_